RNA–Protein interactions for RNA: ENST00000444469.3

TMEM238-201, Transcript of transmembrane protein 238, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM238, Length 1,000 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM238-201ENST00000444469 J3KT08 172 aa11.85□□□□□ -0.51
TMEM238-201ENST00000444469 HRES1P13985 223 aa11.85□□□□□ -0.51
TMEM238-201ENST00000444469 BAALC-AS2P0C853 105 aa11.82□□□□□ -0.52
TMEM238-201ENST00000444469 MPLKIPQ8TAP9 179 aa11.81□□□□□ -0.52
TMEM238-201ENST00000444469 NDUFB1O75438 58 aa11.8□□□□□ -0.52
TMEM238-201ENST00000444469 TMA7Q9Y2S6 64 aaKnown RBP11.78□□□□□ -0.52
TMEM238-201ENST00000444469 ZCCHC13Q8WW36 166 aaKnown RBP11.77□□□□□ -0.53
TMEM238-201ENST00000444469 MT2AP02795 61 aa11.76□□□□□ -0.53
TMEM238-201ENST00000444469 LYRM7Q5U5X0 104 aa11.75□□□□□ -0.53
TMEM238-201ENST00000444469 Q6ZQT0 140 aa11.74□□□□□ -0.53
TMEM238-201ENST00000444469 JMJD7-PLA2G4BH0Y9G9 81 aa11.71□□□□□ -0.53
TMEM238-201ENST00000444469 SPINK7P58062 85 aa11.71□□□□□ -0.53
TMEM238-201ENST00000444469 KRTAP10-10P60014 251 aa11.71□□□□□ -0.53
TMEM238-201ENST00000444469 ATXN8Q156A1 80 aa11.71□□□□□ -0.53
TMEM238-201ENST00000444469 M0R143 59 aa11.67□□□□□ -0.54
TMEM238-201ENST00000444469 A0A1B0GW54 56 aa11.66□□□□□ -0.54
TMEM238-201ENST00000444469 MT1FP04733 61 aa11.66□□□□□ -0.54
TMEM238-201ENST00000444469 A8MWP4 228 aa11.64□□□□□ -0.55
TMEM238-201ENST00000444469 PDE6GP18545 87 aa11.64□□□□□ -0.55
TMEM238-201ENST00000444469 Q8N9P0 234 aaPredicted RBP11.64□□□□□ -0.55
TMEM238-201ENST00000444469 C8orf17Q9NRJ1 99 aa11.64□□□□□ -0.55
TMEM238-201ENST00000444469 LOC110117498A0A087WWA1 95 aa11.62□□□□□ -0.55
TMEM238-201ENST00000444469 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.62□□□□□ -0.55
TMEM238-201ENST00000444469 NAA38Q9BRA0 125 aaKnown RBP11.61□□□□□ -0.55
TMEM238-201ENST00000444469 WFDC13Q8IUB5 93 aa11.58□□□□□ -0.56
TMEM238-201ENST00000444469 KRTAP9-7A8MTY7 169 aa11.57□□□□□ -0.56
TMEM238-201ENST00000444469 USH2AO75445 5202 aa11.57□□□□□ -0.56
TMEM238-201ENST00000444469 IGKV3D-7A0A0C4DH55 119 aa11.56□□□□□ -0.56
TMEM238-201ENST00000444469 Q6ZVQ6 151 aa11.56□□□□□ -0.56
TMEM238-201ENST00000444469 C14orf132Q9NPU4 83 aa11.56□□□□□ -0.56
TMEM238-201ENST00000444469 NREPQ16612 68 aa11.55□□□□□ -0.56
TMEM238-201ENST00000444469 KRTAP9-3Q9BYQ3 159 aa11.54□□□□□ -0.56
TMEM238-201ENST00000444469 LCE2BO14633 110 aa11.53□□□□□ -0.56
TMEM238-201ENST00000444469 PRR15Q8IV56 129 aa11.5□□□□□ -0.57
TMEM238-201ENST00000444469 SSPOA2VEC9 5147 aa11.49□□□□□ -0.57
TMEM238-201ENST00000444469 KRTAP19-1Q8IUB9 90 aa11.48□□□□□ -0.57
TMEM238-201ENST00000444469 TMEM254Q8TBM7 123 aa11.45□□□□□ -0.58
TMEM238-201ENST00000444469 MRPL34Q9BQ48 92 aaKnown RBP11.45□□□□□ -0.58
TMEM238-201ENST00000444469 LINC00846Q9NV44 126 aa11.45□□□□□ -0.58
TMEM238-201ENST00000444469 NDUFS5O43920 106 aa11.43□□□□□ -0.58
TMEM238-201ENST00000444469 MMP24-AS1A0A0U1RRL7 71 aa11.4□□□□□ -0.58
TMEM238-201ENST00000444469 BATFQ16520 125 aa11.4□□□□□ -0.58
TMEM238-201ENST00000444469 hDV103S1A0JD37 113 aa11.38□□□□□ -0.59
TMEM238-201ENST00000444469 SMIM6P0DI80 62 aa11.37□□□□□ -0.59
TMEM238-201ENST00000444469 K7EQZ3 153 aa11.35□□□□□ -0.59
TMEM238-201ENST00000444469 TSTD3H0UI37 97 aa11.34□□□□□ -0.59
TMEM238-201ENST00000444469 H1FX-AS1Q4G0G2 97 aa11.33□□□□□ -0.6
TMEM238-201ENST00000444469 FCGBPQ9Y6R7 5405 aaPredicted RBP11.33□□□□□ -0.6
TMEM238-201ENST00000444469 H3BT86 120 aa11.32□□□□□ -0.6
TMEM238-201ENST00000444469 BPY2O14599 106 aa11.31□□□□□ -0.6
TMEM238-201ENST00000444469 IGKV2D-30A0A075B6S6 120 aa11.29□□□□□ -0.6
TMEM238-201ENST00000444469 IGKV2-30P06310 120 aa11.29□□□□□ -0.6
TMEM238-201ENST00000444469 C7orf65Q6ZTY9 151 aa11.26□□□□□ -0.61
TMEM238-201ENST00000444469 C9orf118A6NHY6 69 aa11.24□□□□□ -0.61
TMEM238-201ENST00000444469 A0A1W2PPM0 123 aa11.21□□□□□ -0.61
TMEM238-201ENST00000444469 KRTAP19-6Q3LI70 58 aa11.2□□□□□ -0.62
TMEM238-201ENST00000444469 CASC2Q6XLA1 102 aa11.19□□□□□ -0.62
TMEM238-201ENST00000444469 HCG22E2RYF7 251 aa11.15□□□□□ -0.62
TMEM238-201ENST00000444469 TAX1BP3O14907 124 aa11.14□□□□□ -0.63
TMEM238-201ENST00000444469 Q5W150 140 aa11.14□□□□□ -0.63
TMEM238-201ENST00000444469 Q8N9L7 120 aa11.13□□□□□ -0.63
TMEM238-201ENST00000444469 CXCL6P80162 114 aa11.1□□□□□ -0.63
TMEM238-201ENST00000444469 MACF1Q9UPN3 7388 aaKnown RBP11.09□□□□□ -0.63
TMEM238-201ENST00000444469 C4orf26Q17RF5 130 aa11.07□□□□□ -0.64
TMEM238-201ENST00000444469 SPCS1Q9Y6A9 102 aa11.06□□□□□ -0.64
TMEM238-201ENST00000444469 UBL5Q9BZL1 73 aa11.04□□□□□ -0.64
TMEM238-201ENST00000444469 SYNE2Q8WXH0 6885 aaKnown RBP11.02□□□□□ -0.65
TMEM238-201ENST00000444469 FAM236AA0A1B0GUQ0 79 aa10.97□□□□□ -0.65
TMEM238-201ENST00000444469 FAM236BA0A1B0GV22 79 aa10.97□□□□□ -0.65
TMEM238-201ENST00000444469 C5orf47Q569G3 176 aa10.96□□□□□ -0.65
TMEM238-201ENST00000444469 SMCPP49901 116 aaPredicted RBP10.92□□□□□ -0.66
TMEM238-201ENST00000444469 S4R3F8 94 aa10.91□□□□□ -0.66
TMEM238-201ENST00000444469 LOC105371267A0A1B0GV96 52 aa10.86□□□□□ -0.67
TMEM238-201ENST00000444469 CSAG1Q6PB30 78 aa10.86□□□□□ -0.67
TMEM238-201ENST00000444469 C1orf64Q8NEQ6 169 aa10.86□□□□□ -0.67
TMEM238-201ENST00000444469 COL5A1-AS1Q5SY13 56 aa10.85□□□□□ -0.67
TMEM238-201ENST00000444469 TP53AIP1Q9HCN2 124 aa10.83□□□□□ -0.68
TMEM238-201ENST00000444469 KRTAP6-3Q3LI67 103 aa10.81□□□□□ -0.68
TMEM238-201ENST00000444469 K7EP34 96 aa10.8□□□□□ -0.68
TMEM238-201ENST00000444469 PRO0461Q9UI25 63 aa10.8□□□□□ -0.68
TMEM238-201ENST00000444469 KRTAP3-1Q9BYR8 98 aa10.78□□□□□ -0.68
TMEM238-201ENST00000444469 LCA10Q71F78 164 aa10.76□□□□□ -0.69
TMEM238-201ENST00000444469 Q5VV11 94 aa10.74□□□□□ -0.69
TMEM238-201ENST00000444469 A6NN06 94 aa10.73□□□□□ -0.69
TMEM238-201ENST00000444469 GTF2H5Q6ZYL4 71 aa10.7□□□□□ -0.7
TMEM238-201ENST00000444469 SPRR2GQ9BYE4 73 aa10.64□□□□□ -0.71
TMEM238-201ENST00000444469 F8W1H4 67 aa10.62□□□□□ -0.71
TMEM238-201ENST00000444469 MT1BP07438 61 aa10.62□□□□□ -0.71
TMEM238-201ENST00000444469 KLKP1Q107X0 134 aa10.62□□□□□ -0.71
TMEM238-201ENST00000444469 KRTAP19-8Q3LI54 63 aa10.6□□□□□ -0.71
TMEM238-201ENST00000444469 ETDBQ3ZM63 59 aa10.58□□□□□ -0.72
TMEM238-201ENST00000444469 CYP4F30PQ9H0H9 118 aa10.58□□□□□ -0.72
TMEM238-201ENST00000444469 TRAV22A0A0B4J277 110 aa10.56□□□□□ -0.72
TMEM238-201ENST00000444469 LOC101927531A0A1B0GV80 90 aa10.55□□□□□ -0.72
TMEM238-201ENST00000444469 KRTAP3-3Q9BYR6 98 aa10.5□□□□□ -0.73
TMEM238-201ENST00000444469 IMUPQ9GZP8 106 aa10.49□□□□□ -0.73
TMEM238-201ENST00000444469 CRIPTQ9P021 101 aa10.49□□□□□ -0.73
TMEM238-201ENST00000444469 KRTAP10-5P60370 271 aa10.47□□□□□ -0.73
TMEM238-201ENST00000444469 ACYP1P07311 99 aa10.44□□□□□ -0.74
TMEM238-201ENST00000444469 A0A087WVE0 104 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms