RNA–Protein interactions for RNA: ENST00000442956.1

LINC00299-202, long intergenic non-protein coding RNA 299, humanhuman

TSL 2 BASIC

Gene LINC00299, Length 2,342 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00299-202ENST00000442956 CASC2Q6XLA1 102 aa8.37□□□□□ -1.07
LINC00299-202ENST00000442956 KRTAP17-1Q9BYP8 105 aa8.37□□□□□ -1.07
LINC00299-202ENST00000442956 MMP24-AS1A0A0U1RRL7 71 aa8.37□□□□□ -1.07
LINC00299-202ENST00000442956 OCR1Q9BZK8 76 aa8.37□□□□□ -1.07
LINC00299-202ENST00000442956 SPAG11AQ6PDA7 123 aa8.36□□□□□ -1.07
LINC00299-202ENST00000442956 C8orf17Q9NRJ1 99 aa8.35□□□□□ -1.07
LINC00299-202ENST00000442956 LRP1Q07954 4544 aaKnown RBP8.34□□□□□ -1.07
LINC00299-202ENST00000442956 hDV103S1A0JD37 113 aa8.33□□□□□ -1.08
LINC00299-202ENST00000442956 RPS29P62273 56 aaKnown RBP8.32□□□□□ -1.08
LINC00299-202ENST00000442956 NOTCH2NLQ7Z3S9 236 aa8.32□□□□□ -1.08
LINC00299-202ENST00000442956 Q8N1X5 172 aa8.32□□□□□ -1.08
LINC00299-202ENST00000442956 C20orf197Q8N268 126 aa8.3□□□□□ -1.08
LINC00299-202ENST00000442956 TNXBP22105 4242 aa8.27□□□□□ -1.08
LINC00299-202ENST00000442956 FAT3Q8TDW7 4589 aa8.27□□□□□ -1.09
LINC00299-202ENST00000442956 FLG2Q5D862 2391 aaPredicted RBP8.27□□□□□ -1.09
LINC00299-202ENST00000442956 CYSTM1Q9H1C7 97 aa8.26□□□□□ -1.09
LINC00299-202ENST00000442956 C8orf87E5RJ46 101 aa8.25□□□□□ -1.09
LINC00299-202ENST00000442956 MYCBP2O75592 4640 aa8.25□□□□□ -1.09
LINC00299-202ENST00000442956 KRTAP10-8P60410 259 aa8.25□□□□□ -1.09
LINC00299-202ENST00000442956 TMEM254Q8TBM7 123 aa8.24□□□□□ -1.09
LINC00299-202ENST00000442956 MRPL34Q9BQ48 92 aaKnown RBP8.24□□□□□ -1.09
LINC00299-202ENST00000442956 SNURFQ9Y675 71 aa8.24□□□□□ -1.09
LINC00299-202ENST00000442956 LINC00313P59037 77 aa8.23□□□□□ -1.09
LINC00299-202ENST00000442956 KLKP1Q107X0 134 aa8.21□□□□□ -1.09
LINC00299-202ENST00000442956 NDUFS5O43920 106 aa8.21□□□□□ -1.1
LINC00299-202ENST00000442956 C5orf47Q569G3 176 aa8.21□□□□□ -1.1
LINC00299-202ENST00000442956 A0A0U1RQV1 116 aa8.19□□□□□ -1.1
LINC00299-202ENST00000442956 TP53AIP1Q9HCN2 124 aa8.18□□□□□ -1.1
LINC00299-202ENST00000442956 RETNLBQ9BQ08 111 aa8.17□□□□□ -1.1
LINC00299-202ENST00000442956 MP68P56378 58 aa8.16□□□□□ -1.1
LINC00299-202ENST00000442956 H0Y9P7 68 aa8.15□□□□□ -1.1
LINC00299-202ENST00000442956 KRTAP16-1A8MUX0 517 aa8.14□□□□□ -1.11
LINC00299-202ENST00000442956 TRAV22A0A0B4J277 110 aa8.14□□□□□ -1.11
LINC00299-202ENST00000442956 DMBT1Q9UGM3 2413 aaPredicted RBP8.14□□□□□ -1.11
LINC00299-202ENST00000442956 BIRC6Q9NR09 4857 aa8.14□□□□□ -1.11
LINC00299-202ENST00000442956 H7BZZ5 65 aa8.13□□□□□ -1.11
LINC00299-202ENST00000442956 KRTAP4-5Q9BYR2 181 aa8.13□□□□□ -1.11
LINC00299-202ENST00000442956 MT1HL1P0DM35 61 aa8.13□□□□□ -1.11
LINC00299-202ENST00000442956 Q8N9P0 234 aaPredicted RBP8.12□□□□□ -1.11
LINC00299-202ENST00000442956 LINC00208Q96KT6 92 aa8.12□□□□□ -1.11
LINC00299-202ENST00000442956 ZCCHC13Q8WW36 166 aaKnown RBP8.12□□□□□ -1.11
LINC00299-202ENST00000442956 NDUFC1O43677 76 aa8.11□□□□□ -1.11
LINC00299-202ENST00000442956 TMEM258P61165 79 aa8.09□□□□□ -1.11
LINC00299-202ENST00000442956 H3BPC8 53 aa8.08□□□□□ -1.12
LINC00299-202ENST00000442956 C1orf64Q8NEQ6 169 aa8.08□□□□□ -1.12
LINC00299-202ENST00000442956 Q5W150 140 aa8.07□□□□□ -1.12
LINC00299-202ENST00000442956 HERC2O95714 4834 aa8.07□□□□□ -1.12
LINC00299-202ENST00000442956 ABCA13Q86UQ4 5058 aa8.07□□□□□ -1.12
LINC00299-202ENST00000442956 C9orf92A6NGG3 77 aa8.06□□□□□ -1.12
LINC00299-202ENST00000442956 OXTP01178 125 aa8.06□□□□□ -1.12
LINC00299-202ENST00000442956 KRTAP13-3Q3SY46 172 aa8.04□□□□□ -1.12
LINC00299-202ENST00000442956 FAM236DA0A1B0GTK5 79 aa8.01□□□□□ -1.13
LINC00299-202ENST00000442956 FAM236CP0DP71 79 aa8.01□□□□□ -1.13
LINC00299-202ENST00000442956 FP248Q71RG6 208 aaPredicted RBP8.01□□□□□ -1.13
LINC00299-202ENST00000442956 LOC101927531A0A1B0GV80 90 aa7.97□□□□□ -1.13
LINC00299-202ENST00000442956 IGLV7-46A0A075B6I9 117 aa7.96□□□□□ -1.13
LINC00299-202ENST00000442956 C20orf166-AS1Q96NR2 134 aa7.96□□□□□ -1.13
LINC00299-202ENST00000442956 A8MUU9 505 aa7.95□□□□□ -1.14
LINC00299-202ENST00000442956 PCOTHQ58A44 107 aa7.95□□□□□ -1.14
LINC00299-202ENST00000442956 ATP5EP56381 51 aaPredicted RBP7.94□□□□□ -1.14
LINC00299-202ENST00000442956 CYP4F30PQ9H0H9 118 aa7.92□□□□□ -1.14
LINC00299-202ENST00000442956 PRR4Q16378 134 aa7.91□□□□□ -1.14
LINC00299-202ENST00000442956 IGKV2-30P06310 120 aa7.9□□□□□ -1.14
LINC00299-202ENST00000442956 SPANXA2-OT1Q8N9U9 137 aa7.89□□□□□ -1.15
LINC00299-202ENST00000442956 Q75L30 129 aa7.88□□□□□ -1.15
LINC00299-202ENST00000442956 IGKV2D-30A0A075B6S6 120 aa7.87□□□□□ -1.15
LINC00299-202ENST00000442956 J3QL48 77 aa7.87□□□□□ -1.15
LINC00299-202ENST00000442956 RPS28P62857 69 aaKnown RBP7.85□□□□□ -1.15
LINC00299-202ENST00000442956 SERP1Q9Y6X1 66 aa7.84□□□□□ -1.15
LINC00299-202ENST00000442956 XP32Q5T750 250 aa7.83□□□□□ -1.16
LINC00299-202ENST00000442956 HRES1P13985 223 aa7.8□□□□□ -1.16
LINC00299-202ENST00000442956 C7orf65Q6ZTY9 151 aa7.8□□□□□ -1.16
LINC00299-202ENST00000442956 RPL37P61927 97 aaKnown RBP7.79□□□□□ -1.16
LINC00299-202ENST00000442956 TPRXLQ17RH7 258 aa7.78□□□□□ -1.16
LINC00299-202ENST00000442956 ATP11AUNQ6ZP68 121 aa7.78□□□□□ -1.16
LINC00299-202ENST00000442956 PCLOQ9Y6V0 5065 aa7.76□□□□□ -1.17
LINC00299-202ENST00000442956 LPAP08519 4548 aa7.73□□□□□ -1.17
LINC00299-202ENST00000442956 SPINK7P58062 85 aa7.73□□□□□ -1.17
LINC00299-202ENST00000442956 LRP2P98164 4655 aa7.72□□□□□ -1.17
LINC00299-202ENST00000442956 COA5Q86WW8 74 aa7.68□□□□□ -1.18
LINC00299-202ENST00000442956 DMAC1Q96GE9 116 aa7.68□□□□□ -1.18
LINC00299-202ENST00000442956 C4orf26Q17RF5 130 aa7.67□□□□□ -1.18
LINC00299-202ENST00000442956 SMIM26A0A096LP01 95 aa7.65□□□□□ -1.18
LINC00299-202ENST00000442956 HERC1Q15751 4861 aa7.65□□□□□ -1.19
LINC00299-202ENST00000442956 ACYP2P14621 99 aa7.64□□□□□ -1.19
LINC00299-202ENST00000442956 A8MUN3 132 aa7.57□□□□□ -1.2
LINC00299-202ENST00000442956 MPLKIPQ8TAP9 179 aa7.55□□□□□ -1.2
LINC00299-202ENST00000442956 KRTAP3-1Q9BYR8 98 aa7.55□□□□□ -1.2
LINC00299-202ENST00000442956 CHKB-CPT1BH3BT56 60 aa7.55□□□□□ -1.2
LINC00299-202ENST00000442956 HMCN2Q8NDA2 5059 aa7.54□□□□□ -1.2
LINC00299-202ENST00000442956 COX6B2Q6YFQ2 88 aa7.53□□□□□ -1.2
LINC00299-202ENST00000442956 SEC61BP60468 96 aaKnown RBP7.51□□□□□ -1.21
LINC00299-202ENST00000442956 Q1T7F1 81 aa7.48□□□□□ -1.21
LINC00299-202ENST00000442956 V9GYY9 64 aa7.44□□□□□ -1.22
LINC00299-202ENST00000442956 MUC17Q685J3 4493 aa7.42□□□□□ -1.22
LINC00299-202ENST00000442956 PSPHP1O15172 72 aa7.39□□□□□ -1.23
LINC00299-202ENST00000442956 KRTAP4-1Q9BYQ7 146 aa7.38□□□□□ -1.23
LINC00299-202ENST00000442956 RBM12B-AS1Q9P1G2 102 aa7.38□□□□□ -1.23
LINC00299-202ENST00000442956 LINC01558Q9Y6Z2 57 aa7.38□□□□□ -1.23
LINC00299-202ENST00000442956 PRR15LQ9BU68 103 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms