RNA–Protein interactions for RNA: ENST00000441883.5

MRPL28-204, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 800 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-204ENST00000441883 FAM236CP0DP71 79 aa13.51□□□□□ -0.25
MRPL28-204ENST00000441883 USH2AO75445 5202 aa13.5□□□□□ -0.25
MRPL28-204ENST00000441883 C9JAW5 83 aa13.46□□□□□ -0.25
MRPL28-204ENST00000441883 RBM12B-AS1Q9P1G2 102 aa13.46□□□□□ -0.25
MRPL28-204ENST00000441883 Q6ZQT0 140 aa13.45□□□□□ -0.26
MRPL28-204ENST00000441883 MT2AP02795 61 aa13.44□□□□□ -0.26
MRPL28-204ENST00000441883 J3KT08 172 aa13.43□□□□□ -0.26
MRPL28-204ENST00000441883 SSPOA2VEC9 5147 aa13.42□□□□□ -0.26
MRPL28-204ENST00000441883 C21orf62-AS1Q17RA5 79 aa13.41□□□□□ -0.26
MRPL28-204ENST00000441883 ZCCHC13Q8WW36 166 aaKnown RBP13.38□□□□□ -0.27
MRPL28-204ENST00000441883 NAA38Q9BRA0 125 aaKnown RBP13.36□□□□□ -0.27
MRPL28-204ENST00000441883 MT1FP04733 61 aa13.34□□□□□ -0.27
MRPL28-204ENST00000441883 ATXN8Q156A1 80 aa13.34□□□□□ -0.27
MRPL28-204ENST00000441883 Q8N9P0 234 aaPredicted RBP13.33□□□□□ -0.28
MRPL28-204ENST00000441883 LOC110117498A0A087WWA1 95 aa13.31□□□□□ -0.28
MRPL28-204ENST00000441883 JMJD7-PLA2G4BH0Y9G9 81 aa13.31□□□□□ -0.28
MRPL28-204ENST00000441883 M0R143 59 aa13.31□□□□□ -0.28
MRPL28-204ENST00000441883 SPINK7P58062 85 aa13.31□□□□□ -0.28
MRPL28-204ENST00000441883 NDUFB1O75438 58 aa13.3□□□□□ -0.28
MRPL28-204ENST00000441883 A0A1B0GW54 56 aa13.28□□□□□ -0.28
MRPL28-204ENST00000441883 C8orf17Q9NRJ1 99 aa13.27□□□□□ -0.29
MRPL28-204ENST00000441883 A8MWP4 228 aa13.26□□□□□ -0.29
MRPL28-204ENST00000441883 KRTAP9-3Q9BYQ3 159 aa13.26□□□□□ -0.29
MRPL28-204ENST00000441883 IGKV3D-7A0A0C4DH55 119 aa13.24□□□□□ -0.29
MRPL28-204ENST00000441883 LCE2BO14633 110 aa13.24□□□□□ -0.29
MRPL28-204ENST00000441883 PDE6GP18545 87 aa13.23□□□□□ -0.29
MRPL28-204ENST00000441883 MTURNQ8N3F0 131 aa13.23□□□□□ -0.29
MRPL28-204ENST00000441883 KRTAP10-10P60014 251 aa13.22□□□□□ -0.29
MRPL28-204ENST00000441883 C14orf132Q9NPU4 83 aa13.21□□□□□ -0.29
MRPL28-204ENST00000441883 KRTAP9-1A8MXZ3 250 aaPredicted RBP13.17□□□□□ -0.3
MRPL28-204ENST00000441883 Q6ZVQ6 151 aa13.14□□□□□ -0.31
MRPL28-204ENST00000441883 PRR15Q8IV56 129 aa13.14□□□□□ -0.31
MRPL28-204ENST00000441883 LYRM7Q5U5X0 104 aa13.12□□□□□ -0.31
MRPL28-204ENST00000441883 FCGBPQ9Y6R7 5405 aaPredicted RBP13.11□□□□□ -0.31
MRPL28-204ENST00000441883 WFDC13Q8IUB5 93 aa13.11□□□□□ -0.31
MRPL28-204ENST00000441883 SMIM6P0DI80 62 aa13.1□□□□□ -0.31
MRPL28-204ENST00000441883 NREPQ16612 68 aa13.1□□□□□ -0.31
MRPL28-204ENST00000441883 MMP24-AS1A0A0U1RRL7 71 aa13.06□□□□□ -0.32
MRPL28-204ENST00000441883 KRTAP19-1Q8IUB9 90 aa13.06□□□□□ -0.32
MRPL28-204ENST00000441883 KRTAP9-7A8MTY7 169 aa13.05□□□□□ -0.32
MRPL28-204ENST00000441883 TMEM254Q8TBM7 123 aa13.03□□□□□ -0.32
MRPL28-204ENST00000441883 MRPL34Q9BQ48 92 aaKnown RBP13.03□□□□□ -0.32
MRPL28-204ENST00000441883 BATFQ16520 125 aa13.01□□□□□ -0.33
MRPL28-204ENST00000441883 TSTD3H0UI37 97 aa12.96□□□□□ -0.33
MRPL28-204ENST00000441883 K7EQZ3 153 aa12.96□□□□□ -0.33
MRPL28-204ENST00000441883 H3BT86 120 aa12.95□□□□□ -0.34
MRPL28-204ENST00000441883 hDV103S1A0JD37 113 aa12.94□□□□□ -0.34
MRPL28-204ENST00000441883 C9orf118A6NHY6 69 aa12.94□□□□□ -0.34
MRPL28-204ENST00000441883 TAX1BP3O14907 124 aa12.91□□□□□ -0.34
MRPL28-204ENST00000441883 A0A1W2PPM0 123 aa12.88□□□□□ -0.35
MRPL28-204ENST00000441883 NDUFS5O43920 106 aa12.87□□□□□ -0.35
MRPL28-204ENST00000441883 H1FX-AS1Q4G0G2 97 aa12.85□□□□□ -0.35
MRPL28-204ENST00000441883 BPY2O14599 106 aa12.84□□□□□ -0.35
MRPL28-204ENST00000441883 Q5W150 140 aa12.84□□□□□ -0.35
MRPL28-204ENST00000441883 KRTAP19-6Q3LI70 58 aa12.78□□□□□ -0.36
MRPL28-204ENST00000441883 IGKV2D-30A0A075B6S6 120 aa12.77□□□□□ -0.37
MRPL28-204ENST00000441883 IGKV2-30P06310 120 aa12.77□□□□□ -0.37
MRPL28-204ENST00000441883 Q8N9L7 120 aa12.76□□□□□ -0.37
MRPL28-204ENST00000441883 LOC105371267A0A1B0GV96 52 aa12.75□□□□□ -0.37
MRPL28-204ENST00000441883 C7orf65Q6ZTY9 151 aa12.72□□□□□ -0.37
MRPL28-204ENST00000441883 MACF1Q9UPN3 7388 aaKnown RBP12.7□□□□□ -0.38
MRPL28-204ENST00000441883 SMCPP49901 116 aaPredicted RBP12.7□□□□□ -0.38
MRPL28-204ENST00000441883 CASC2Q6XLA1 102 aa12.7□□□□□ -0.38
MRPL28-204ENST00000441883 HCG22E2RYF7 251 aa12.67□□□□□ -0.38
MRPL28-204ENST00000441883 SPCS1Q9Y6A9 102 aa12.67□□□□□ -0.38
MRPL28-204ENST00000441883 LINC00846Q9NV44 126 aa12.66□□□□□ -0.38
MRPL28-204ENST00000441883 C4orf26Q17RF5 130 aa12.6□□□□□ -0.39
MRPL28-204ENST00000441883 CXCL6P80162 114 aa12.58□□□□□ -0.4
MRPL28-204ENST00000441883 SYNE2Q8WXH0 6885 aaKnown RBP12.56□□□□□ -0.4
MRPL28-204ENST00000441883 PRO0461Q9UI25 63 aa12.56□□□□□ -0.4
MRPL28-204ENST00000441883 UBL5Q9BZL1 73 aa12.5□□□□□ -0.41
MRPL28-204ENST00000441883 KRTAP3-1Q9BYR8 98 aa12.49□□□□□ -0.41
MRPL28-204ENST00000441883 COL5A1-AS1Q5SY13 56 aa12.45□□□□□ -0.42
MRPL28-204ENST00000441883 K7EP34 96 aa12.43□□□□□ -0.42
MRPL28-204ENST00000441883 C5orf47Q569G3 176 aa12.41□□□□□ -0.42
MRPL28-204ENST00000441883 C1orf64Q8NEQ6 169 aa12.33□□□□□ -0.44
MRPL28-204ENST00000441883 S4R3F8 94 aa12.31□□□□□ -0.44
MRPL28-204ENST00000441883 TP53AIP1Q9HCN2 124 aa12.28□□□□□ -0.44
MRPL28-204ENST00000441883 CSAG1Q6PB30 78 aa12.27□□□□□ -0.45
MRPL28-204ENST00000441883 LCA10Q71F78 164 aa12.27□□□□□ -0.45
MRPL28-204ENST00000441883 FAM236AA0A1B0GUQ0 79 aa12.26□□□□□ -0.45
MRPL28-204ENST00000441883 FAM236BA0A1B0GV22 79 aa12.26□□□□□ -0.45
MRPL28-204ENST00000441883 KRTAP6-3Q3LI67 103 aa12.26□□□□□ -0.45
MRPL28-204ENST00000441883 MT1BP07438 61 aa12.21□□□□□ -0.45
MRPL28-204ENST00000441883 GTF2H5Q6ZYL4 71 aa12.2□□□□□ -0.46
MRPL28-204ENST00000441883 F8W1H4 67 aa12.19□□□□□ -0.46
MRPL28-204ENST00000441883 ETDBQ3ZM63 59 aa12.18□□□□□ -0.46
MRPL28-204ENST00000441883 SPRR2GQ9BYE4 73 aa12.18□□□□□ -0.46
MRPL28-204ENST00000441883 KRTAP19-8Q3LI54 63 aa12.15□□□□□ -0.46
MRPL28-204ENST00000441883 KRTAP3-3Q9BYR6 98 aa12.14□□□□□ -0.47
MRPL28-204ENST00000441883 CYP4F30PQ9H0H9 118 aa12.13□□□□□ -0.47
MRPL28-204ENST00000441883 Q5VV11 94 aa12.11□□□□□ -0.47
MRPL28-204ENST00000441883 A6NN06 94 aa12.07□□□□□ -0.48
MRPL28-204ENST00000441883 KLKP1Q107X0 134 aa12.05□□□□□ -0.48
MRPL28-204ENST00000441883 A0A087WVE0 104 aa12.03□□□□□ -0.48
MRPL28-204ENST00000441883 TRAV22A0A0B4J277 110 aa11.99□□□□□ -0.49
MRPL28-204ENST00000441883 PCP4L1A6NKN8 68 aa11.97□□□□□ -0.49
MRPL28-204ENST00000441883 LOC101927531A0A1B0GV80 90 aa11.95□□□□□ -0.5
MRPL28-204ENST00000441883 KRTAP10-5P60370 271 aa11.95□□□□□ -0.5
MRPL28-204ENST00000441883 ACYP1P07311 99 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 161.5 ms