RNA–Protein interactions for RNA: ENST00000441871.5

R3HDM1-209, Transcript of R3H domain containing 1, humanhuman

TSL 4

Gene R3HDM1, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-209ENST00000441871 ZNF469Q96JG9 3925 aaPredicted RBP1.37□□□□□ -2.19
R3HDM1-209ENST00000441871 KMT2AQ03164 3969 aa1.37□□□□□ -2.19
R3HDM1-209ENST00000441871 DNAH7Q8WXX0 4024 aa1.37□□□□□ -2.19
R3HDM1-209ENST00000441871 CEP250Q9BV73 2442 aa1.37□□□□□ -2.19
R3HDM1-209ENST00000441871 DNAH8Q96JB1 4490 aa1.36□□□□□ -2.19
R3HDM1-209ENST00000441871 CRYBG3Q68DQ2 2970 aa1.36□□□□□ -2.19
R3HDM1-209ENST00000441871 DEFB135Q30KP9 77 aa1.36□□□□□ -2.19
R3HDM1-209ENST00000441871 DEFB108BQ8NET1 73 aa1.36□□□□□ -2.19
R3HDM1-209ENST00000441871 DYNC2H1Q8NCM8 4307 aaKnown RBP1.35□□□□□ -2.19
R3HDM1-209ENST00000441871 KRTAP10-4P60372 401 aaPredicted RBP1.35□□□□□ -2.19
R3HDM1-209ENST00000441871 SPINK6Q6UWN8 80 aa1.35□□□□□ -2.19
R3HDM1-209ENST00000441871 PIEZO1Q92508 2521 aa1.35□□□□□ -2.19
R3HDM1-209ENST00000441871 RELNP78509 3460 aa1.35□□□□□ -2.19
R3HDM1-209ENST00000441871 ANK2Q01484 3957 aa1.34□□□□□ -2.19
R3HDM1-209ENST00000441871 A0A096LNI7 61 aa1.34□□□□□ -2.19
R3HDM1-209ENST00000441871 DEFB110Q30KQ9 67 aa1.34□□□□□ -2.19
R3HDM1-209ENST00000441871 HECTD1Q9ULT8 2610 aa1.34□□□□□ -2.2
R3HDM1-209ENST00000441871 FAT2Q9NYQ8 4349 aa1.33□□□□□ -2.2
R3HDM1-209ENST00000441871 FRYQ5TBA9 3013 aa1.33□□□□□ -2.2
R3HDM1-209ENST00000441871 ATRQ13535 2644 aa1.33□□□□□ -2.2
R3HDM1-209ENST00000441871 DNAH3Q8TD57 4116 aa1.33□□□□□ -2.2
R3HDM1-209ENST00000441871 TNP1P09430 55 aa1.32□□□□□ -2.2
R3HDM1-209ENST00000441871 KRTAP12-3P60328 96 aa1.32□□□□□ -2.2
R3HDM1-209ENST00000441871 PKHD1L1Q86WI1 4243 aa1.32□□□□□ -2.2
R3HDM1-209ENST00000441871 PTPN13Q12923 2485 aa1.3□□□□□ -2.2
R3HDM1-209ENST00000441871 PDZD2O15018 2839 aa1.3□□□□□ -2.2
R3HDM1-209ENST00000441871 CEP350Q5VT06 3117 aa1.29□□□□□ -2.2
R3HDM1-209ENST00000441871 SZT2Q5T011 3432 aa1.29□□□□□ -2.2
R3HDM1-209ENST00000441871 DCHS2Q6V1P9 2916 aa1.29□□□□□ -2.2
R3HDM1-209ENST00000441871 DNAH2Q9P225 4427 aa1.29□□□□□ -2.2
R3HDM1-209ENST00000441871 C5orf42Q9H799 3197 aa1.29□□□□□ -2.2
R3HDM1-209ENST00000441871 M0R2T5 61 aa1.28□□□□□ -2.2
R3HDM1-209ENST00000441871 SPART-AS1P0CW21 52 aa1.28□□□□□ -2.2
R3HDM1-209ENST00000441871 DNAH10Q8IVF4 4471 aa1.28□□□□□ -2.21
R3HDM1-209ENST00000441871 ANK3Q12955 4377 aaKnown RBP1.27□□□□□ -2.21
R3HDM1-209ENST00000441871 CFAP54Q96N23 3096 aa1.27□□□□□ -2.21
R3HDM1-209ENST00000441871 KRTAP21-3Q3LHN1 58 aa1.27□□□□□ -2.21
R3HDM1-209ENST00000441871 DEFB124Q8NES8 71 aa1.27□□□□□ -2.21
R3HDM1-209ENST00000441871 PRUNE2Q8WUY3 3088 aa1.27□□□□□ -2.21
R3HDM1-209ENST00000441871 FRYLO94915 3013 aa1.27□□□□□ -2.21
R3HDM1-209ENST00000441871 KRTAP5-8O75690 187 aa1.26□□□□□ -2.21
R3HDM1-209ENST00000441871 TENM4Q6N022 2769 aa1.26□□□□□ -2.21
R3HDM1-209ENST00000441871 FLGP20930 4061 aaPredicted RBP1.25□□□□□ -2.21
R3HDM1-209ENST00000441871 NBEAQ8NFP9 2946 aa1.25□□□□□ -2.21
R3HDM1-209ENST00000441871 USP24Q9UPU5 2620 aa1.25□□□□□ -2.21
R3HDM1-209ENST00000441871 COL12A1Q99715 3063 aa1.25□□□□□ -2.21
R3HDM1-209ENST00000441871 USP9YO00507 2555 aaPredicted RBP1.25□□□□□ -2.21
R3HDM1-209ENST00000441871 FBN2P35556 2912 aa1.25□□□□□ -2.21
R3HDM1-209ENST00000441871 RIF1Q5UIP0 2472 aaKnown RBP1.24□□□□□ -2.21
R3HDM1-209ENST00000441871 FAM186AA6NE01 2351 aa1.24□□□□□ -2.21
R3HDM1-209ENST00000441871 C9orf92A6NGG3 77 aa1.24□□□□□ -2.21
R3HDM1-209ENST00000441871 ITPR3Q14573 2671 aa1.24□□□□□ -2.21
R3HDM1-209ENST00000441871 NF1P21359 2839 aa1.24□□□□□ -2.21
R3HDM1-209ENST00000441871 FRAS1Q86XX4 4008 aa1.24□□□□□ -2.21
R3HDM1-209ENST00000441871 SMG1Q96Q15 3661 aaKnown RBP1.24□□□□□ -2.21
R3HDM1-209ENST00000441871 LRRK2Q5S007 2527 aa1.23□□□□□ -2.21
R3HDM1-209ENST00000441871 HECTD4Q9Y4D8 3996 aa1.23□□□□□ -2.21
R3HDM1-209ENST00000441871 SPTBN5Q9NRC6 3674 aaKnown RBP1.23□□□□□ -2.21
R3HDM1-209ENST00000441871 HIVEP3Q5T1R4 2406 aa1.23□□□□□ -2.21
R3HDM1-209ENST00000441871 A0A096LPF7 62 aa1.23□□□□□ -2.21
R3HDM1-209ENST00000441871 KRTAP2-3P0C7H8 128 aa1.23□□□□□ -2.21
R3HDM1-209ENST00000441871 KRTAP2-4Q9BYR9 128 aa1.23□□□□□ -2.21
R3HDM1-209ENST00000441871 KRTAP2-1Q9BYU5 128 aa1.23□□□□□ -2.21
R3HDM1-209ENST00000441871 BDP1A6H8Y1 2624 aa1.23□□□□□ -2.21
R3HDM1-209ENST00000441871 CHD8Q9HCK8 2581 aa1.23□□□□□ -2.21
R3HDM1-209ENST00000441871 DNAH6Q9C0G6 4158 aa1.23□□□□□ -2.21
R3HDM1-209ENST00000441871 SETXQ7Z333 2677 aaKnown RBP1.22□□□□□ -2.21
R3HDM1-209ENST00000441871 FLNCQ14315 2725 aa1.22□□□□□ -2.21
R3HDM1-209ENST00000441871 DMDP11532 3685 aa1.22□□□□□ -2.21
R3HDM1-209ENST00000441871 ITPR1Q14643 2758 aa1.21□□□□□ -2.22
R3HDM1-209ENST00000441871 NCOR2Q9Y618 2525 aa1.21□□□□□ -2.22
R3HDM1-209ENST00000441871 HTTP42858 3142 aa1.21□□□□□ -2.22
R3HDM1-209ENST00000441871 BOD1L1Q8NFC6 3051 aa1.21□□□□□ -2.22
R3HDM1-209ENST00000441871 GCN1Q92616 2671 aaKnown RBP1.21□□□□□ -2.22
R3HDM1-209ENST00000441871 ZZEF1O43149 2961 aa1.21□□□□□ -2.22
R3HDM1-209ENST00000441871 EPG5Q9HCE0 2579 aa1.2□□□□□ -2.22
R3HDM1-209ENST00000441871 ATMQ13315 3056 aa1.2□□□□□ -2.22
R3HDM1-209ENST00000441871 FAT3Q8TDW7 4589 aa1.2□□□□□ -2.22
R3HDM1-209ENST00000441871 H3BNG1 76 aa1.2□□□□□ -2.22
R3HDM1-209ENST00000441871 SPG11Q96JI7 2443 aa1.2□□□□□ -2.22
R3HDM1-209ENST00000441871 COL7A1Q02388 2944 aa1.2□□□□□ -2.22
R3HDM1-209ENST00000441871 TRIOO75962 3097 aa1.19□□□□□ -2.22
R3HDM1-209ENST00000441871 LRBAP50851 2863 aa1.19□□□□□ -2.22
R3HDM1-209ENST00000441871 HSPG2P98160 4391 aa1.19□□□□□ -2.22
R3HDM1-209ENST00000441871 HUWE1Q7Z6Z7 4374 aaKnown RBP1.19□□□□□ -2.22
R3HDM1-209ENST00000441871 CACNA1AO00555 2505 aa1.19□□□□□ -2.22
R3HDM1-209ENST00000441871 Q9Y3F1 56 aa1.19□□□□□ -2.22
R3HDM1-209ENST00000441871 DMXL1Q9Y485 3027 aa1.19□□□□□ -2.22
R3HDM1-209ENST00000441871 DNAH1Q9P2D7 4330 aa1.19□□□□□ -2.22
R3HDM1-209ENST00000441871 LAMA5O15230 3695 aa1.19□□□□□ -2.22
R3HDM1-209ENST00000441871 CELSR3Q9NYQ7 3312 aa1.18□□□□□ -2.22
R3HDM1-209ENST00000441871 CSMD1Q96PZ7 3565 aa1.18□□□□□ -2.22
R3HDM1-209ENST00000441871 MKI67P46013 3256 aaKnown RBP1.18□□□□□ -2.22
R3HDM1-209ENST00000441871 TNXBP22105 4242 aa1.18□□□□□ -2.22
R3HDM1-209ENST00000441871 APCP25054 2843 aa1.18□□□□□ -2.22
R3HDM1-209ENST00000441871 SMR3AQ99954 134 aa1.18□□□□□ -2.22
R3HDM1-209ENST00000441871 CMYA5Q8N3K9 4069 aa1.18□□□□□ -2.22
R3HDM1-209ENST00000441871 HELZ2Q9BYK8 2649 aaKnown RBP1.18□□□□□ -2.22
R3HDM1-209ENST00000441871 CUBNO60494 3623 aa1.17□□□□□ -2.22
R3HDM1-209ENST00000441871 DNAH5Q8TE73 4624 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms