RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 NDUFB1O75438 58 aa11.71□□□□□ -0.53
VPS13B-204ENST00000441350 PRR4Q16378 134 aa11.71□□□□□ -0.53
VPS13B-204ENST00000441350 PRR15Q8IV56 129 aa11.71□□□□□ -0.53
VPS13B-204ENST00000441350 Q8N9L7 120 aa11.71□□□□□ -0.54
VPS13B-204ENST00000441350 HERC1Q15751 4861 aa11.68□□□□□ -0.54
VPS13B-204ENST00000441350 IGHV6-1A0A0B4J1U7 121 aa11.68□□□□□ -0.54
VPS13B-204ENST00000441350 MT-ATP8P03928 68 aa11.64□□□□□ -0.55
VPS13B-204ENST00000441350 NOTCH2NLQ7Z3S9 236 aa11.64□□□□□ -0.55
VPS13B-204ENST00000441350 C8orf87E5RJ46 101 aa11.61□□□□□ -0.55
VPS13B-204ENST00000441350 KRTAP13-3Q3SY46 172 aa11.61□□□□□ -0.55
VPS13B-204ENST00000441350 LINC00313P59037 77 aa11.6□□□□□ -0.55
VPS13B-204ENST00000441350 C8orf17Q9NRJ1 99 aa11.6□□□□□ -0.55
VPS13B-204ENST00000441350 HIST1H4AP62805 103 aaKnown RBP11.6□□□□□ -0.55
VPS13B-204ENST00000441350 C9orf92A6NGG3 77 aa11.58□□□□□ -0.56
VPS13B-204ENST00000441350 TPRXLQ17RH7 258 aa11.58□□□□□ -0.56
VPS13B-204ENST00000441350 MMP24-AS1A0A0U1RRL7 71 aa11.57□□□□□ -0.56
VPS13B-204ENST00000441350 IMUPQ9GZP8 106 aa11.57□□□□□ -0.56
VPS13B-204ENST00000441350 A0A087WVE0 104 aa11.53□□□□□ -0.56
VPS13B-204ENST00000441350 KRTAP16-1A8MUX0 517 aa11.53□□□□□ -0.56
VPS13B-204ENST00000441350 HCG22E2RYF7 251 aa11.53□□□□□ -0.56
VPS13B-204ENST00000441350 hDV103S1A0JD37 113 aa11.5□□□□□ -0.57
VPS13B-204ENST00000441350 CASC2Q6XLA1 102 aa11.49□□□□□ -0.57
VPS13B-204ENST00000441350 WFDC13Q8IUB5 93 aa11.49□□□□□ -0.57
VPS13B-204ENST00000441350 HMCN2Q8NDA2 5059 aa11.49□□□□□ -0.57
VPS13B-204ENST00000441350 TMEM254Q8TBM7 123 aa11.48□□□□□ -0.57
VPS13B-204ENST00000441350 LPAP08519 4548 aa11.46□□□□□ -0.58
VPS13B-204ENST00000441350 XP32Q5T750 250 aa11.46□□□□□ -0.58
VPS13B-204ENST00000441350 MRPL34Q9BQ48 92 aaKnown RBP11.45□□□□□ -0.58
VPS13B-204ENST00000441350 Q8N9P0 234 aaPredicted RBP11.42□□□□□ -0.58
VPS13B-204ENST00000441350 C20orf166-AS1Q96NR2 134 aa11.42□□□□□ -0.58
VPS13B-204ENST00000441350 A8MUU9 505 aa11.4□□□□□ -0.58
VPS13B-204ENST00000441350 Q75L30 129 aa11.38□□□□□ -0.59
VPS13B-204ENST00000441350 LRP2P98164 4655 aa11.35□□□□□ -0.59
VPS13B-204ENST00000441350 RPL37P61927 97 aaKnown RBP11.34□□□□□ -0.59
VPS13B-204ENST00000441350 FAM236AA0A1B0GUQ0 79 aa11.33□□□□□ -0.6
VPS13B-204ENST00000441350 FAM236BA0A1B0GV22 79 aa11.33□□□□□ -0.6
VPS13B-204ENST00000441350 NDUFS5O43920 106 aa11.31□□□□□ -0.6
VPS13B-204ENST00000441350 SCGB1A1P11684 91 aa11.26□□□□□ -0.61
VPS13B-204ENST00000441350 TP53AIP1Q9HCN2 124 aa11.25□□□□□ -0.61
VPS13B-204ENST00000441350 OCR1Q9BZK8 76 aa11.24□□□□□ -0.61
VPS13B-204ENST00000441350 ATP11AUNQ6ZP68 121 aa11.21□□□□□ -0.61
VPS13B-204ENST00000441350 ZCCHC13Q8WW36 166 aaKnown RBP11.21□□□□□ -0.61
VPS13B-204ENST00000441350 Q5W150 140 aa11.19□□□□□ -0.62
VPS13B-204ENST00000441350 ATOX1O00244 68 aa11.18□□□□□ -0.62
VPS13B-204ENST00000441350 UQCRQO14949 82 aa11.17□□□□□ -0.62
VPS13B-204ENST00000441350 SEC61BP60468 96 aaKnown RBP11.17□□□□□ -0.62
VPS13B-204ENST00000441350 PCOTHQ58A44 107 aa11.17□□□□□ -0.62
VPS13B-204ENST00000441350 SMIM20Q8N5G0 67 aa11.15□□□□□ -0.62
VPS13B-204ENST00000441350 MUC17Q685J3 4493 aa11.13□□□□□ -0.63
VPS13B-204ENST00000441350 TRAV7A0A075B6U4 112 aa11.12□□□□□ -0.63
VPS13B-204ENST00000441350 TRAV22A0A0B4J277 110 aa11.09□□□□□ -0.63
VPS13B-204ENST00000441350 C5orf47Q569G3 176 aa11.06□□□□□ -0.64
VPS13B-204ENST00000441350 H0Y9P7 68 aa11.05□□□□□ -0.64
VPS13B-204ENST00000441350 SERP2Q8N6R1 65 aa11.05□□□□□ -0.64
VPS13B-204ENST00000441350 MP68P56378 58 aa10.99□□□□□ -0.65
VPS13B-204ENST00000441350 KRTAP4-1Q9BYQ7 146 aa10.98□□□□□ -0.65
VPS13B-204ENST00000441350 UBR4Q5T4S7 5183 aa10.98□□□□□ -0.65
VPS13B-204ENST00000441350 IGKV2-30P06310 120 aa10.97□□□□□ -0.65
VPS13B-204ENST00000441350 SPINK7P58062 85 aa10.97□□□□□ -0.65
VPS13B-204ENST00000441350 ANAPC13Q9BS18 74 aa10.97□□□□□ -0.65
VPS13B-204ENST00000441350 IGKV2D-30A0A075B6S6 120 aa10.95□□□□□ -0.66
VPS13B-204ENST00000441350 H3BPC8 53 aa10.95□□□□□ -0.66
VPS13B-204ENST00000441350 LINC00208Q96KT6 92 aa10.95□□□□□ -0.66
VPS13B-204ENST00000441350 LOC101927531A0A1B0GV80 90 aa10.94□□□□□ -0.66
VPS13B-204ENST00000441350 C1orf64Q8NEQ6 169 aa10.94□□□□□ -0.66
VPS13B-204ENST00000441350 COX7CP15954 63 aa10.93□□□□□ -0.66
VPS13B-204ENST00000441350 C7orf65Q6ZTY9 151 aa10.93□□□□□ -0.66
VPS13B-204ENST00000441350 CYP4F30PQ9H0H9 118 aa10.91□□□□□ -0.66
VPS13B-204ENST00000441350 A0A0U1RQV1 116 aa10.88□□□□□ -0.67
VPS13B-204ENST00000441350 RNF213Q63HN8 5207 aa10.86□□□□□ -0.67
VPS13B-204ENST00000441350 C20orf197Q8N268 126 aa10.85□□□□□ -0.67
VPS13B-204ENST00000441350 HRES1P13985 223 aa10.83□□□□□ -0.68
VPS13B-204ENST00000441350 SNURFQ9Y675 71 aa10.82□□□□□ -0.68
VPS13B-204ENST00000441350 MUC2Q02817 5179 aa10.81□□□□□ -0.68
VPS13B-204ENST00000441350 KLKP1Q107X0 134 aa10.79□□□□□ -0.68
VPS13B-204ENST00000441350 MPLKIPQ8TAP9 179 aa10.76□□□□□ -0.69
VPS13B-204ENST00000441350 CCDC179H3BU77 68 aa10.75□□□□□ -0.69
VPS13B-204ENST00000441350 C4orf26Q17RF5 130 aa10.7□□□□□ -0.7
VPS13B-204ENST00000441350 CYSTM1Q9H1C7 97 aa10.68□□□□□ -0.7
VPS13B-204ENST00000441350 LCE2DQ5TA82 110 aaPredicted RBP10.67□□□□□ -0.7
VPS13B-204ENST00000441350 RBM12B-AS1Q9P1G2 102 aa10.66□□□□□ -0.7
VPS13B-204ENST00000441350 KRTAP19-2Q3LHN2 52 aa10.66□□□□□ -0.7
VPS13B-204ENST00000441350 COX6B2Q6YFQ2 88 aa10.63□□□□□ -0.71
VPS13B-204ENST00000441350 NDUFC1O43677 76 aa10.62□□□□□ -0.71
VPS13B-204ENST00000441350 PCP4P48539 62 aa10.61□□□□□ -0.71
VPS13B-204ENST00000441350 H7BZZ5 65 aa10.6□□□□□ -0.71
VPS13B-204ENST00000441350 KRTAP3-1Q9BYR8 98 aa10.59□□□□□ -0.71
VPS13B-204ENST00000441350 FAM236DA0A1B0GTK5 79 aa10.56□□□□□ -0.72
VPS13B-204ENST00000441350 FAM236CP0DP71 79 aa10.56□□□□□ -0.72
VPS13B-204ENST00000441350 SPANXA2-OT1Q8N9U9 137 aa10.55□□□□□ -0.72
VPS13B-204ENST00000441350 LCE2CQ5TA81 110 aa10.54□□□□□ -0.72
VPS13B-204ENST00000441350 A8MUN3 132 aa10.48□□□□□ -0.73
VPS13B-204ENST00000441350 H1FX-AS1Q4G0G2 97 aa10.48□□□□□ -0.73
VPS13B-204ENST00000441350 DMAC1Q96GE9 116 aa10.48□□□□□ -0.73
VPS13B-204ENST00000441350 FAT4Q6V0I7 4981 aa10.45□□□□□ -0.74
VPS13B-204ENST00000441350 FLGP20930 4061 aaPredicted RBP10.44□□□□□ -0.74
VPS13B-204ENST00000441350 ACYP2P14621 99 aa10.36□□□□□ -0.75
VPS13B-204ENST00000441350 TMEM258P61165 79 aa10.36□□□□□ -0.75
VPS13B-204ENST00000441350 MT1HP80294 61 aa10.33□□□□□ -0.76
VPS13B-204ENST00000441350 ATP5EP56381 51 aaPredicted RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms