RNA–Protein interactions for RNA: ENST00000440421.2

LTBR-202, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 729 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-202ENST00000440421 A0A1B0GVX0 72 aa7.08□□□□□ -1.28
LTBR-202ENST00000440421 C21orf62-AS1Q17RA5 79 aa7.08□□□□□ -1.28
LTBR-202ENST00000440421 C9orf118A6NHY6 69 aa7.06□□□□□ -1.28
LTBR-202ENST00000440421 C8orf87E5RJ46 101 aa7.06□□□□□ -1.28
LTBR-202ENST00000440421 J3KT08 172 aa7.06□□□□□ -1.28
LTBR-202ENST00000440421 TAX1BP3O14907 124 aa7.05□□□□□ -1.28
LTBR-202ENST00000440421 PDE6GP18545 87 aa7.05□□□□□ -1.28
LTBR-202ENST00000440421 KRTAP10-6P60371 365 aaPredicted RBP7.05□□□□□ -1.28
LTBR-202ENST00000440421 A0A1W2PPM0 123 aa7.03□□□□□ -1.28
LTBR-202ENST00000440421 LORP23490 312 aaPredicted RBP7.03□□□□□ -1.28
LTBR-202ENST00000440421 LCE2DQ5TA82 110 aaPredicted RBP7.03□□□□□ -1.28
LTBR-202ENST00000440421 MTURNQ8N3F0 131 aa7.03□□□□□ -1.28
LTBR-202ENST00000440421 A0A1B0GW54 56 aa7.02□□□□□ -1.29
LTBR-202ENST00000440421 NDUFB1O75438 58 aa7.01□□□□□ -1.29
LTBR-202ENST00000440421 A8MWP4 228 aa6.99□□□□□ -1.29
LTBR-202ENST00000440421 H3BT86 120 aa6.99□□□□□ -1.29
LTBR-202ENST00000440421 FLGP20930 4061 aaPredicted RBP6.98□□□□□ -1.29
LTBR-202ENST00000440421 IGKV3D-7A0A0C4DH55 119 aa6.97□□□□□ -1.29
LTBR-202ENST00000440421 KRTAP9-6A0A140TA67 174 aa6.97□□□□□ -1.29
LTBR-202ENST00000440421 NREPQ16612 68 aa6.97□□□□□ -1.29
LTBR-202ENST00000440421 C8orf17Q9NRJ1 99 aa6.97□□□□□ -1.29
LTBR-202ENST00000440421 FAM236DA0A1B0GTK5 79 aa6.95□□□□□ -1.3
LTBR-202ENST00000440421 FAM236CP0DP71 79 aa6.95□□□□□ -1.3
LTBR-202ENST00000440421 ZCCHC13Q8WW36 166 aaKnown RBP6.95□□□□□ -1.3
LTBR-202ENST00000440421 SPCS1Q9Y6A9 102 aa6.95□□□□□ -1.3
LTBR-202ENST00000440421 HRES1P13985 223 aa6.94□□□□□ -1.3
LTBR-202ENST00000440421 Q8N9P0 234 aaPredicted RBP6.93□□□□□ -1.3
LTBR-202ENST00000440421 PRR15Q8IV56 129 aa6.92□□□□□ -1.3
LTBR-202ENST00000440421 RBM12B-AS1Q9P1G2 102 aa6.92□□□□□ -1.3
LTBR-202ENST00000440421 Q6ZVQ6 151 aa6.91□□□□□ -1.3
LTBR-202ENST00000440421 COL5A1-AS1Q5SY13 56 aa6.9□□□□□ -1.3
LTBR-202ENST00000440421 MPLKIPQ8TAP9 179 aa6.9□□□□□ -1.3
LTBR-202ENST00000440421 SMCPP49901 116 aaPredicted RBP6.89□□□□□ -1.31
LTBR-202ENST00000440421 K7EQZ3 153 aa6.88□□□□□ -1.31
LTBR-202ENST00000440421 SPINK7P58062 85 aa6.88□□□□□ -1.31
LTBR-202ENST00000440421 MMP24-AS1A0A0U1RRL7 71 aa6.87□□□□□ -1.31
LTBR-202ENST00000440421 BPY2O14599 106 aa6.85□□□□□ -1.31
LTBR-202ENST00000440421 TMEM254Q8TBM7 123 aa6.85□□□□□ -1.31
LTBR-202ENST00000440421 MRPL34Q9BQ48 92 aaKnown RBP6.85□□□□□ -1.31
LTBR-202ENST00000440421 CRCT1Q9UGL9 99 aa6.84□□□□□ -1.31
LTBR-202ENST00000440421 hDV103S1A0JD37 113 aa6.83□□□□□ -1.32
LTBR-202ENST00000440421 K7EP34 96 aa6.83□□□□□ -1.32
LTBR-202ENST00000440421 NDUFS5O43920 106 aa6.82□□□□□ -1.32
LTBR-202ENST00000440421 KRTAP9-8Q9BYQ0 159 aa6.82□□□□□ -1.32
LTBR-202ENST00000440421 PRO0461Q9UI25 63 aa6.82□□□□□ -1.32
LTBR-202ENST00000440421 PCP4L1A6NKN8 68 aa6.81□□□□□ -1.32
LTBR-202ENST00000440421 Q8N9L7 120 aa6.8□□□□□ -1.32
LTBR-202ENST00000440421 KRTAP3-3Q9BYR6 98 aa6.8□□□□□ -1.32
LTBR-202ENST00000440421 KRTAP3-2Q9BYR7 98 aa6.8□□□□□ -1.32
LTBR-202ENST00000440421 FSIP2Q5CZC0 6907 aa6.8□□□□□ -1.32
LTBR-202ENST00000440421 WFDC13Q8IUB5 93 aa6.79□□□□□ -1.32
LTBR-202ENST00000440421 LINC00846Q9NV44 126 aa6.77□□□□□ -1.33
LTBR-202ENST00000440421 CASC2Q6XLA1 102 aa6.75□□□□□ -1.33
LTBR-202ENST00000440421 GTF2H5Q6ZYL4 71 aa6.75□□□□□ -1.33
LTBR-202ENST00000440421 UBL5Q9BZL1 73 aa6.75□□□□□ -1.33
LTBR-202ENST00000440421 MT2AP02795 61 aa6.73□□□□□ -1.33
LTBR-202ENST00000440421 Q5W150 140 aa6.72□□□□□ -1.33
LTBR-202ENST00000440421 HCG22E2RYF7 251 aa6.71□□□□□ -1.34
LTBR-202ENST00000440421 IGKV2D-30A0A075B6S6 120 aa6.7□□□□□ -1.34
LTBR-202ENST00000440421 IGKV2-30P06310 120 aa6.7□□□□□ -1.34
LTBR-202ENST00000440421 F8W1H4 67 aa6.69□□□□□ -1.34
LTBR-202ENST00000440421 MT1FP04733 61 aa6.69□□□□□ -1.34
LTBR-202ENST00000440421 ETDBQ3ZM63 59 aa6.68□□□□□ -1.34
LTBR-202ENST00000440421 KRTAP10-10P60014 251 aa6.67□□□□□ -1.34
LTBR-202ENST00000440421 C7orf65Q6ZTY9 151 aa6.66□□□□□ -1.34
LTBR-202ENST00000440421 CXCL6P80162 114 aa6.64□□□□□ -1.35
LTBR-202ENST00000440421 H1FX-AS1Q4G0G2 97 aa6.63□□□□□ -1.35
LTBR-202ENST00000440421 KRTAP9-3Q9BYQ3 159 aa6.59□□□□□ -1.35
LTBR-202ENST00000440421 C4orf26Q17RF5 130 aa6.58□□□□□ -1.36
LTBR-202ENST00000440421 LCE2BO14633 110 aa6.56□□□□□ -1.36
LTBR-202ENST00000440421 USH2AO75445 5202 aa6.55□□□□□ -1.36
LTBR-202ENST00000440421 TP53AIP1Q9HCN2 124 aa6.52□□□□□ -1.37
LTBR-202ENST00000440421 ACYP1P07311 99 aa6.5□□□□□ -1.37
LTBR-202ENST00000440421 SSPOA2VEC9 5147 aa6.47□□□□□ -1.37
LTBR-202ENST00000440421 FAM240AA0A1B0GVK7 77 aa6.46□□□□□ -1.38
LTBR-202ENST00000440421 C1orf64Q8NEQ6 169 aa6.46□□□□□ -1.38
LTBR-202ENST00000440421 KRTAP3-1Q9BYR8 98 aa6.46□□□□□ -1.38
LTBR-202ENST00000440421 HIST1H4AP62805 103 aaKnown RBP6.44□□□□□ -1.38
LTBR-202ENST00000440421 C5orf47Q569G3 176 aa6.44□□□□□ -1.38
LTBR-202ENST00000440421 KRTAP19-1Q8IUB9 90 aa6.44□□□□□ -1.38
LTBR-202ENST00000440421 ATP5EP2Q5VTU8 51 aa6.43□□□□□ -1.38
LTBR-202ENST00000440421 S4R3F8 94 aa6.42□□□□□ -1.38
LTBR-202ENST00000440421 A0A1B0GV90 55 aa6.41□□□□□ -1.38
LTBR-202ENST00000440421 TRAV22A0A0B4J277 110 aa6.4□□□□□ -1.38
LTBR-202ENST00000440421 CYP4F30PQ9H0H9 118 aa6.4□□□□□ -1.38
LTBR-202ENST00000440421 LCA10Q71F78 164 aa6.38□□□□□ -1.39
LTBR-202ENST00000440421 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.37□□□□□ -1.39
LTBR-202ENST00000440421 A0A087WVE0 104 aa6.36□□□□□ -1.39
LTBR-202ENST00000440421 LOC101927531A0A1B0GV80 90 aa6.36□□□□□ -1.39
LTBR-202ENST00000440421 LINC00643Q86TS7 51 aa6.36□□□□□ -1.39
LTBR-202ENST00000440421 CSAG1Q6PB30 78 aa6.35□□□□□ -1.39
LTBR-202ENST00000440421 FAM236AA0A1B0GUQ0 79 aa6.34□□□□□ -1.39
LTBR-202ENST00000440421 FAM236BA0A1B0GV22 79 aa6.34□□□□□ -1.39
LTBR-202ENST00000440421 UQCRQO14949 82 aa6.34□□□□□ -1.39
LTBR-202ENST00000440421 H0Y9P7 68 aa6.33□□□□□ -1.4
LTBR-202ENST00000440421 FCGBPQ9Y6R7 5405 aaPredicted RBP6.33□□□□□ -1.4
LTBR-202ENST00000440421 KRTAP19-6Q3LI70 58 aa6.31□□□□□ -1.4
LTBR-202ENST00000440421 ATOX1O00244 68 aa6.29□□□□□ -1.4
LTBR-202ENST00000440421 KRTAP9-7A8MTY7 169 aa6.27□□□□□ -1.41
LTBR-202ENST00000440421 J3QR89 54 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms