RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 DNAL4O96015 105 aa9.59□□□□□ -0.87
TRIM39-210ENST00000440271 TMEM256-PLSCR3K7ERE1 68 aa9.58□□□□□ -0.88
TRIM39-210ENST00000440271 HIGD1BQ9P298 99 aa9.58□□□□□ -0.88
TRIM39-210ENST00000440271 C14orf144Q96I85 54 aa9.56□□□□□ -0.88
TRIM39-210ENST00000440271 LYRM7Q5U5X0 104 aa9.55□□□□□ -0.88
TRIM39-210ENST00000440271 VPS25Q9BRG1 176 aa9.55□□□□□ -0.88
TRIM39-210ENST00000440271 J3KT08 172 aa9.54□□□□□ -0.88
TRIM39-210ENST00000440271 H1FX-AS1Q4G0G2 97 aa9.54□□□□□ -0.88
TRIM39-210ENST00000440271 CEND1Q8N111 149 aa9.52□□□□□ -0.89
TRIM39-210ENST00000440271 A6NN06 94 aa9.51□□□□□ -0.89
TRIM39-210ENST00000440271 C2orf91Q6ZV80 131 aa9.51□□□□□ -0.89
TRIM39-210ENST00000440271 UBE2V1Q13404 147 aa9.5□□□□□ -0.89
TRIM39-210ENST00000440271 TMEM238LA0A1B0GVL6 79 aa9.49□□□□□ -0.89
TRIM39-210ENST00000440271 A6NJY4 79 aa9.49□□□□□ -0.89
TRIM39-210ENST00000440271 NDUFB1O75438 58 aa9.48□□□□□ -0.89
TRIM39-210ENST00000440271 FXYD2P54710 66 aa9.46□□□□□ -0.9
TRIM39-210ENST00000440271 C8orf17Q9NRJ1 99 aa9.46□□□□□ -0.9
TRIM39-210ENST00000440271 IGKV3D-7A0A0C4DH55 119 aa9.45□□□□□ -0.9
TRIM39-210ENST00000440271 RBM3P98179 157 aaKnown RBP9.45□□□□□ -0.9
TRIM39-210ENST00000440271 PSMB2P49721 201 aa9.44□□□□□ -0.9
TRIM39-210ENST00000440271 DSCR8Q96T75 97 aa9.44□□□□□ -0.9
TRIM39-210ENST00000440271 S100A6P06703 90 aa9.42□□□□□ -0.9
TRIM39-210ENST00000440271 SPATA45Q537H7 98 aa9.42□□□□□ -0.9
TRIM39-210ENST00000440271 PAM16Q9Y3D7 125 aa9.42□□□□□ -0.9
TRIM39-210ENST00000440271 C21orf62-AS1Q17RA5 79 aa9.41□□□□□ -0.9
TRIM39-210ENST00000440271 Q6ZQT0 140 aa9.41□□□□□ -0.9
TRIM39-210ENST00000440271 COX6CP09669 75 aa9.4□□□□□ -0.9
TRIM39-210ENST00000440271 MT1BP07438 61 aa9.39□□□□□ -0.91
TRIM39-210ENST00000440271 Q6ZVQ6 151 aa9.39□□□□□ -0.91
TRIM39-210ENST00000440271 KRTAP5-9P26371 169 aa9.37□□□□□ -0.91
TRIM39-210ENST00000440271 C9JAW5 83 aa9.35□□□□□ -0.91
TRIM39-210ENST00000440271 K7ERJ3 54 aa9.34□□□□□ -0.91
TRIM39-210ENST00000440271 Q5VV11 94 aa9.33□□□□□ -0.92
TRIM39-210ENST00000440271 KMT2DO14686 5537 aa9.32□□□□□ -0.92
TRIM39-210ENST00000440271 VAMP8Q9BV40 100 aa9.31□□□□□ -0.92
TRIM39-210ENST00000440271 KRTAP10-5P60370 271 aa9.29□□□□□ -0.92
TRIM39-210ENST00000440271 MDN1Q9NU22 5596 aa9.29□□□□□ -0.92
TRIM39-210ENST00000440271 FAM236AA0A1B0GUQ0 79 aa9.27□□□□□ -0.93
TRIM39-210ENST00000440271 FAM236BA0A1B0GV22 79 aa9.27□□□□□ -0.93
TRIM39-210ENST00000440271 KRTAP19-8Q3LI54 63 aa9.27□□□□□ -0.93
TRIM39-210ENST00000440271 MRPL34Q9BQ48 92 aaKnown RBP9.27□□□□□ -0.93
TRIM39-210ENST00000440271 PRR15Q8IV56 129 aa9.26□□□□□ -0.93
TRIM39-210ENST00000440271 BAALC-AS2P0C853 105 aa9.25□□□□□ -0.93
TRIM39-210ENST00000440271 TMEM254Q8TBM7 123 aa9.25□□□□□ -0.93
TRIM39-210ENST00000440271 IGKV2D-30A0A075B6S6 120 aa9.24□□□□□ -0.93
TRIM39-210ENST00000440271 IGKV2-30P06310 120 aa9.24□□□□□ -0.93
TRIM39-210ENST00000440271 S100A1P23297 94 aa9.24□□□□□ -0.93
TRIM39-210ENST00000440271 HSD52Q0P140 79 aa9.23□□□□□ -0.93
TRIM39-210ENST00000440271 SPRR2GQ9BYE4 73 aa9.23□□□□□ -0.93
TRIM39-210ENST00000440271 MMP24-AS1A0A0U1RRL7 71 aa9.22□□□□□ -0.93
TRIM39-210ENST00000440271 A0A1B0GW54 56 aa9.21□□□□□ -0.94
TRIM39-210ENST00000440271 KRTAP2-3P0C7H8 128 aa9.21□□□□□ -0.94
TRIM39-210ENST00000440271 SCGB1C2P0DMR2 95 aa9.21□□□□□ -0.94
TRIM39-210ENST00000440271 C5orf47Q569G3 176 aa9.21□□□□□ -0.94
TRIM39-210ENST00000440271 KRTAP2-4Q9BYR9 128 aa9.21□□□□□ -0.94
TRIM39-210ENST00000440271 NDUFS5O43920 106 aa9.2□□□□□ -0.94
TRIM39-210ENST00000440271 C7orf65Q6ZTY9 151 aa9.19□□□□□ -0.94
TRIM39-210ENST00000440271 hDV103S1A0JD37 113 aa9.16□□□□□ -0.94
TRIM39-210ENST00000440271 LOC110117498A0A087WWA1 95 aa9.15□□□□□ -0.94
TRIM39-210ENST00000440271 C4orf26Q17RF5 130 aa9.15□□□□□ -0.94
TRIM39-210ENST00000440271 Q5W150 140 aa9.15□□□□□ -0.94
TRIM39-210ENST00000440271 JMJD7-PLA2G4BH0Y9G9 81 aa9.13□□□□□ -0.95
TRIM39-210ENST00000440271 NREPQ16612 68 aa9.12□□□□□ -0.95
TRIM39-210ENST00000440271 PDE6GP18545 87 aa9.09□□□□□ -0.95
TRIM39-210ENST00000440271 K7EQZ3 153 aa9.07□□□□□ -0.96
TRIM39-210ENST00000440271 CSAG1Q6PB30 78 aa9.06□□□□□ -0.96
TRIM39-210ENST00000440271 C14orf132Q9NPU4 83 aa9.05□□□□□ -0.96
TRIM39-210ENST00000440271 S4R3F8 94 aa9.03□□□□□ -0.96
TRIM39-210ENST00000440271 KRTAP3-1Q9BYR8 98 aa9.02□□□□□ -0.97
TRIM39-210ENST00000440271 KLKP1Q107X0 134 aa9.01□□□□□ -0.97
TRIM39-210ENST00000440271 IMUPQ9GZP8 106 aa9.01□□□□□ -0.97
TRIM39-210ENST00000440271 ATXN8Q156A1 80 aa9□□□□□ -0.97
TRIM39-210ENST00000440271 LCA10Q71F78 164 aa8.98□□□□□ -0.97
TRIM39-210ENST00000440271 SPRR2EP22531 72 aa8.97□□□□□ -0.97
TRIM39-210ENST00000440271 SPRR2BP35325 72 aa8.97□□□□□ -0.97
TRIM39-210ENST00000440271 SPRR2AP35326 72 aa8.97□□□□□ -0.97
TRIM39-210ENST00000440271 SPRR2FQ96RM1 72 aa8.95□□□□□ -0.98
TRIM39-210ENST00000440271 HCG22E2RYF7 251 aa8.93□□□□□ -0.98
TRIM39-210ENST00000440271 SMCPP49901 116 aaPredicted RBP8.93□□□□□ -0.98
TRIM39-210ENST00000440271 UQCR10Q9UDW1 63 aa8.93□□□□□ -0.98
TRIM39-210ENST00000440271 PYY3Q5JQD4 70 aa8.92□□□□□ -0.98
TRIM39-210ENST00000440271 CASC2Q6XLA1 102 aa8.9□□□□□ -0.98
TRIM39-210ENST00000440271 C1orf64Q8NEQ6 169 aa8.9□□□□□ -0.98
TRIM39-210ENST00000440271 BPY2O14599 106 aa8.89□□□□□ -0.99
TRIM39-210ENST00000440271 KRTAP2-2Q9BYT5 123 aa8.89□□□□□ -0.99
TRIM39-210ENST00000440271 KRTAP2-1Q9BYU5 128 aa8.89□□□□□ -0.99
TRIM39-210ENST00000440271 CXCL6P80162 114 aa8.88□□□□□ -0.99
TRIM39-210ENST00000440271 NAA38Q9BRA0 125 aaKnown RBP8.87□□□□□ -0.99
TRIM39-210ENST00000440271 Q8N9L7 120 aa8.84□□□□□ -0.99
TRIM39-210ENST00000440271 CRIPTQ9P021 101 aa8.84□□□□□ -0.99
TRIM39-210ENST00000440271 KRTAP3-3Q9BYR6 98 aa8.8□□□□□ -1
TRIM39-210ENST00000440271 LCE1AQ5T7P2 110 aa8.78□□□□□ -1
TRIM39-210ENST00000440271 KRTAP8-1Q8IUC2 63 aa8.73□□□□□ -1.01
TRIM39-210ENST00000440271 PRO2289Q9P1D8 64 aa8.69□□□□□ -1.02
TRIM39-210ENST00000440271 SPRR2DP22532 72 aa8.67□□□□□ -1.02
TRIM39-210ENST00000440271 M0R143 59 aa8.66□□□□□ -1.02
TRIM39-210ENST00000440271 MT1XP80297 61 aa8.65□□□□□ -1.02
TRIM39-210ENST00000440271 A0A087WVE0 104 aa8.63□□□□□ -1.03
TRIM39-210ENST00000440271 H3BT86 120 aa8.61□□□□□ -1.03
TRIM39-210ENST00000440271 TSTD3H0UI37 97 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms