RNA–Protein interactions for RNA: ENST00000440264.5

CCNA1-202, Transcript of cyclin A1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCNA1, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-202ENST00000440264 EPPK1P58107 5090 aaKnown RBP10.71□□□□□ -0.69
CCNA1-202ENST00000440264 A0A0U1RQV1 116 aa10.71□□□□□ -0.69
CCNA1-202ENST00000440264 IGHV6-1A0A0B4J1U7 121 aa10.7□□□□□ -0.7
CCNA1-202ENST00000440264 hDV103S1A0JD37 113 aa10.7□□□□□ -0.7
CCNA1-202ENST00000440264 KRTAP17-1Q9BYP8 105 aa10.7□□□□□ -0.7
CCNA1-202ENST00000440264 SNURFQ9Y675 71 aa10.7□□□□□ -0.7
CCNA1-202ENST00000440264 KIAA1109Q2LD37 5005 aa10.69□□□□□ -0.7
CCNA1-202ENST00000440264 H7BZZ5 65 aa10.68□□□□□ -0.7
CCNA1-202ENST00000440264 SPINK1P00995 79 aa10.68□□□□□ -0.7
CCNA1-202ENST00000440264 TNXBP22105 4242 aa10.67□□□□□ -0.7
CCNA1-202ENST00000440264 LIMD2Q9BT23 127 aa10.67□□□□□ -0.7
CCNA1-202ENST00000440264 LRP1Q07954 4544 aaKnown RBP10.66□□□□□ -0.7
CCNA1-202ENST00000440264 RPS29P62273 56 aaKnown RBP10.66□□□□□ -0.7
CCNA1-202ENST00000440264 ZCCHC13Q8WW36 166 aaKnown RBP10.66□□□□□ -0.7
CCNA1-202ENST00000440264 LINC00304Q8N9R0 145 aa10.65□□□□□ -0.71
CCNA1-202ENST00000440264 C5orf47Q569G3 176 aa10.64□□□□□ -0.71
CCNA1-202ENST00000440264 TMEM258P61165 79 aa10.62□□□□□ -0.71
CCNA1-202ENST00000440264 FAM229AH3BQW9 127 aa10.62□□□□□ -0.71
CCNA1-202ENST00000440264 C4orf48Q5BLP8 95 aa10.62□□□□□ -0.71
CCNA1-202ENST00000440264 FAT3Q8TDW7 4589 aa10.61□□□□□ -0.71
CCNA1-202ENST00000440264 SPAG11AQ6PDA7 123 aa10.61□□□□□ -0.71
CCNA1-202ENST00000440264 Q5VSD8 79 aa10.6□□□□□ -0.71
CCNA1-202ENST00000440264 MRPL34Q9BQ48 92 aaKnown RBP10.6□□□□□ -0.71
CCNA1-202ENST00000440264 C8orf87E5RJ46 101 aa10.59□□□□□ -0.71
CCNA1-202ENST00000440264 NDUFC1O43677 76 aa10.57□□□□□ -0.72
CCNA1-202ENST00000440264 KRTAP16-1A8MUX0 517 aa10.54□□□□□ -0.72
CCNA1-202ENST00000440264 TP53AIP1Q9HCN2 124 aa10.54□□□□□ -0.72
CCNA1-202ENST00000440264 H0Y9P7 68 aa10.52□□□□□ -0.72
CCNA1-202ENST00000440264 LINC00313P59037 77 aa10.52□□□□□ -0.73
CCNA1-202ENST00000440264 FLG2Q5D862 2391 aaPredicted RBP10.51□□□□□ -0.73
CCNA1-202ENST00000440264 TRAV22A0A0B4J277 110 aa10.5□□□□□ -0.73
CCNA1-202ENST00000440264 KRTAP10-8P60410 259 aa10.5□□□□□ -0.73
CCNA1-202ENST00000440264 KRTAP13-3Q3SY46 172 aa10.49□□□□□ -0.73
CCNA1-202ENST00000440264 Q8N9P0 234 aaPredicted RBP10.49□□□□□ -0.73
CCNA1-202ENST00000440264 H3BPC8 53 aa10.49□□□□□ -0.73
CCNA1-202ENST00000440264 MP68P56378 58 aa10.49□□□□□ -0.73
CCNA1-202ENST00000440264 LINC00208Q96KT6 92 aa10.47□□□□□ -0.73
CCNA1-202ENST00000440264 FAM236DA0A1B0GTK5 79 aa10.47□□□□□ -0.73
CCNA1-202ENST00000440264 FAM236CP0DP71 79 aa10.47□□□□□ -0.73
CCNA1-202ENST00000440264 MYCBP2O75592 4640 aa10.45□□□□□ -0.74
CCNA1-202ENST00000440264 NDUFS5O43920 106 aa10.44□□□□□ -0.74
CCNA1-202ENST00000440264 Q5W150 140 aa10.44□□□□□ -0.74
CCNA1-202ENST00000440264 Q8N1X5 172 aa10.44□□□□□ -0.74
CCNA1-202ENST00000440264 C1orf64Q8NEQ6 169 aa10.42□□□□□ -0.74
CCNA1-202ENST00000440264 RPS28P62857 69 aaKnown RBP10.39□□□□□ -0.75
CCNA1-202ENST00000440264 OXTP01178 125 aa10.38□□□□□ -0.75
CCNA1-202ENST00000440264 ATP5EP56381 51 aaPredicted RBP10.37□□□□□ -0.75
CCNA1-202ENST00000440264 BIRC6Q9NR09 4857 aa10.37□□□□□ -0.75
CCNA1-202ENST00000440264 MT1HL1P0DM35 61 aa10.34□□□□□ -0.75
CCNA1-202ENST00000440264 RETNLBQ9BQ08 111 aa10.33□□□□□ -0.76
CCNA1-202ENST00000440264 KRTAP4-5Q9BYR2 181 aa10.3□□□□□ -0.76
CCNA1-202ENST00000440264 SERP1Q9Y6X1 66 aa10.29□□□□□ -0.76
CCNA1-202ENST00000440264 SPANXA2-OT1Q8N9U9 137 aa10.29□□□□□ -0.76
CCNA1-202ENST00000440264 CYP4F30PQ9H0H9 118 aa10.28□□□□□ -0.76
CCNA1-202ENST00000440264 DMBT1Q9UGM3 2413 aaPredicted RBP10.27□□□□□ -0.76
CCNA1-202ENST00000440264 LOC101927531A0A1B0GV80 90 aa10.26□□□□□ -0.77
CCNA1-202ENST00000440264 C20orf166-AS1Q96NR2 134 aa10.23□□□□□ -0.77
CCNA1-202ENST00000440264 A8MUU9 505 aa10.22□□□□□ -0.77
CCNA1-202ENST00000440264 PCOTHQ58A44 107 aa10.22□□□□□ -0.77
CCNA1-202ENST00000440264 IGLV7-46A0A075B6I9 117 aa10.21□□□□□ -0.77
CCNA1-202ENST00000440264 C9orf92A6NGG3 77 aa10.21□□□□□ -0.77
CCNA1-202ENST00000440264 IGKV2-30P06310 120 aa10.2□□□□□ -0.78
CCNA1-202ENST00000440264 PRR4Q16378 134 aa10.2□□□□□ -0.78
CCNA1-202ENST00000440264 HERC2O95714 4834 aa10.18□□□□□ -0.78
CCNA1-202ENST00000440264 FP248Q71RG6 208 aaPredicted RBP10.16□□□□□ -0.78
CCNA1-202ENST00000440264 ABCA13Q86UQ4 5058 aa10.15□□□□□ -0.78
CCNA1-202ENST00000440264 Q75L30 129 aa10.09□□□□□ -0.79
CCNA1-202ENST00000440264 HRES1P13985 223 aa10.07□□□□□ -0.8
CCNA1-202ENST00000440264 IGKV2D-30A0A075B6S6 120 aa10.03□□□□□ -0.8
CCNA1-202ENST00000440264 SMIM26A0A096LP01 95 aa10.03□□□□□ -0.8
CCNA1-202ENST00000440264 C7orf65Q6ZTY9 151 aa9.98□□□□□ -0.81
CCNA1-202ENST00000440264 XP32Q5T750 250 aa9.98□□□□□ -0.81
CCNA1-202ENST00000440264 COA5Q86WW8 74 aa9.98□□□□□ -0.81
CCNA1-202ENST00000440264 DMAC1Q96GE9 116 aa9.98□□□□□ -0.81
CCNA1-202ENST00000440264 RPL37P61927 97 aaKnown RBP9.94□□□□□ -0.82
CCNA1-202ENST00000440264 LRP2P98164 4655 aa9.9□□□□□ -0.82
CCNA1-202ENST00000440264 J3QL48 77 aa9.9□□□□□ -0.82
CCNA1-202ENST00000440264 LPAP08519 4548 aa9.89□□□□□ -0.83
CCNA1-202ENST00000440264 SPINK7P58062 85 aa9.88□□□□□ -0.83
CCNA1-202ENST00000440264 C4orf26Q17RF5 130 aa9.88□□□□□ -0.83
CCNA1-202ENST00000440264 TPRXLQ17RH7 258 aa9.88□□□□□ -0.83
CCNA1-202ENST00000440264 ACYP2P14621 99 aa9.86□□□□□ -0.83
CCNA1-202ENST00000440264 PCLOQ9Y6V0 5065 aa9.85□□□□□ -0.83
CCNA1-202ENST00000440264 Q1T7F1 81 aa9.84□□□□□ -0.83
CCNA1-202ENST00000440264 ATP11AUNQ6ZP68 121 aa9.82□□□□□ -0.84
CCNA1-202ENST00000440264 MPLKIPQ8TAP9 179 aa9.82□□□□□ -0.84
CCNA1-202ENST00000440264 KRTAP3-1Q9BYR8 98 aa9.8□□□□□ -0.84
CCNA1-202ENST00000440264 A8MUN3 132 aa9.75□□□□□ -0.85
CCNA1-202ENST00000440264 V9GYY9 64 aa9.68□□□□□ -0.86
CCNA1-202ENST00000440264 COX6B2Q6YFQ2 88 aa9.67□□□□□ -0.86
CCNA1-202ENST00000440264 LINC01558Q9Y6Z2 57 aa9.66□□□□□ -0.86
CCNA1-202ENST00000440264 CHKB-CPT1BH3BT56 60 aa9.64□□□□□ -0.87
CCNA1-202ENST00000440264 PSPHP1O15172 72 aa9.61□□□□□ -0.87
CCNA1-202ENST00000440264 Q5VV11 94 aa9.6□□□□□ -0.87
CCNA1-202ENST00000440264 MUC17Q685J3 4493 aa9.58□□□□□ -0.88
CCNA1-202ENST00000440264 HERC1Q15751 4861 aa9.58□□□□□ -0.88
CCNA1-202ENST00000440264 PRR15LQ9BU68 103 aa9.55□□□□□ -0.88
CCNA1-202ENST00000440264 HMCN2Q8NDA2 5059 aa9.52□□□□□ -0.89
CCNA1-202ENST00000440264 SEC61BP60468 96 aaKnown RBP9.44□□□□□ -0.9
CCNA1-202ENST00000440264 KRTAP4-1Q9BYQ7 146 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms