RNA–Protein interactions for RNA: ENST00000439649.7

GFRA1-204, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene GFRA1, Length 9,216 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-204ENST00000439649 KRTAP25-1Q3LHN0 102 aa7.24□□□□□ -1.25
GFRA1-204ENST00000439649 KRTAP4-16G5E9R7 235 aaPredicted RBP7.24□□□□□ -1.25
GFRA1-204ENST00000439649 Q5VSD8 79 aa7.23□□□□□ -1.25
GFRA1-204ENST00000439649 BOD1L1Q8NFC6 3051 aa7.21□□□□□ -1.25
GFRA1-204ENST00000439649 A6NN06 94 aa7.2□□□□□ -1.26
GFRA1-204ENST00000439649 ATMQ13315 3056 aa7.18□□□□□ -1.26
GFRA1-204ENST00000439649 LCE6AA0A183 80 aa7.17□□□□□ -1.26
GFRA1-204ENST00000439649 USP34Q70CQ2 3546 aa7.15□□□□□ -1.26
GFRA1-204ENST00000439649 TENM2Q9NT68 2774 aa7.15□□□□□ -1.26
GFRA1-204ENST00000439649 DMXL1Q9Y485 3027 aa7.15□□□□□ -1.26
GFRA1-204ENST00000439649 CELSR1Q9NYQ6 3014 aa7.14□□□□□ -1.27
GFRA1-204ENST00000439649 HRNRQ86YZ3 2850 aaPredicted RBP7.14□□□□□ -1.27
GFRA1-204ENST00000439649 KRTAP1-5Q9BYS1 174 aa7.13□□□□□ -1.27
GFRA1-204ENST00000439649 LAMA3Q16787 3333 aa7.13□□□□□ -1.27
GFRA1-204ENST00000439649 PP632Q6XCG6 107 aa7.12□□□□□ -1.27
GFRA1-204ENST00000439649 MKI67P46013 3256 aaKnown RBP7.1□□□□□ -1.27
GFRA1-204ENST00000439649 ADGRG4Q8IZF6 3080 aa7.1□□□□□ -1.27
GFRA1-204ENST00000439649 COL7A1Q02388 2944 aa7.09□□□□□ -1.27
GFRA1-204ENST00000439649 C20orf166-AS1Q96NR2 134 aa7.09□□□□□ -1.28
GFRA1-204ENST00000439649 A8MUU9 505 aa7.08□□□□□ -1.28
GFRA1-204ENST00000439649 UNC80Q8N2C7 3258 aa7.07□□□□□ -1.28
GFRA1-204ENST00000439649 NDUFAF8A1L188 74 aa7.05□□□□□ -1.28
GFRA1-204ENST00000439649 COL6A3P12111 3177 aa7.05□□□□□ -1.28
GFRA1-204ENST00000439649 TNP1P09430 55 aa7.04□□□□□ -1.28
GFRA1-204ENST00000439649 KRTAP10-1P60331 282 aa7.03□□□□□ -1.28
GFRA1-204ENST00000439649 NOTCH2NLQ7Z3S9 236 aa7□□□□□ -1.29
GFRA1-204ENST00000439649 BRCA2P51587 3418 aa6.98□□□□□ -1.29
GFRA1-204ENST00000439649 KRTAP10-2P60368 255 aa6.97□□□□□ -1.29
GFRA1-204ENST00000439649 CELSR3Q9NYQ7 3312 aa6.95□□□□□ -1.3
GFRA1-204ENST00000439649 DNAH14Q0VDD8 3507 aa6.92□□□□□ -1.3
GFRA1-204ENST00000439649 KRTAP11-1Q8IUC1 163 aa6.91□□□□□ -1.3
GFRA1-204ENST00000439649 Q6ZRN7 208 aaPredicted RBP6.89□□□□□ -1.31
GFRA1-204ENST00000439649 C10orf95Q9H7T3 257 aa6.87□□□□□ -1.31
GFRA1-204ENST00000439649 A8MU10 97 aa6.86□□□□□ -1.31
GFRA1-204ENST00000439649 KRTAP13-1Q8IUC0 172 aa6.84□□□□□ -1.31
GFRA1-204ENST00000439649 VCANP13611 3396 aa6.83□□□□□ -1.32
GFRA1-204ENST00000439649 FBN1P35555 2871 aaKnown RBP6.82□□□□□ -1.32
GFRA1-204ENST00000439649 CFAP47Q6ZTR5 3102 aa6.81□□□□□ -1.32
GFRA1-204ENST00000439649 KRTAP13-2Q52LG2 175 aa6.74□□□□□ -1.33
GFRA1-204ENST00000439649 MEGF8Q7Z7M0 2845 aa6.72□□□□□ -1.33
GFRA1-204ENST00000439649 MYO15AQ9UKN7 3530 aa6.7□□□□□ -1.34
GFRA1-204ENST00000439649 SPEGQ15772 3267 aa6.7□□□□□ -1.34
GFRA1-204ENST00000439649 PRO2289Q9P1D8 64 aa6.69□□□□□ -1.34
GFRA1-204ENST00000439649 P0C880 135 aa6.69□□□□□ -1.34
GFRA1-204ENST00000439649 CDH23Q9H251 3354 aa6.67□□□□□ -1.34
GFRA1-204ENST00000439649 EYSQ5T1H1 3165 aa6.64□□□□□ -1.35
GFRA1-204ENST00000439649 SPTBN5Q9NRC6 3674 aaKnown RBP6.6□□□□□ -1.35
GFRA1-204ENST00000439649 H0YAA0 97 aa6.6□□□□□ -1.35
GFRA1-204ENST00000439649 KRTAP7-1Q8IUC3 87 aa6.6□□□□□ -1.35
GFRA1-204ENST00000439649 FBN3Q75N90 2809 aa6.59□□□□□ -1.35
GFRA1-204ENST00000439649 TPRXLQ17RH7 258 aa6.55□□□□□ -1.36
GFRA1-204ENST00000439649 KRTAP10-8P60410 259 aa6.55□□□□□ -1.36
GFRA1-204ENST00000439649 ZFHX3Q15911 3703 aa6.52□□□□□ -1.37
GFRA1-204ENST00000439649 KRTAP21-3Q3LHN1 58 aa6.52□□□□□ -1.37
GFRA1-204ENST00000439649 XP32Q5T750 250 aa6.5□□□□□ -1.37
GFRA1-204ENST00000439649 OTOGQ6ZRI0 2925 aa6.46□□□□□ -1.37
GFRA1-204ENST00000439649 SZT2Q5T011 3432 aa6.45□□□□□ -1.38
GFRA1-204ENST00000439649 LOC400499M0QZD8 3231 aa6.44□□□□□ -1.38
GFRA1-204ENST00000439649 NBPF19A0A087WUL8 3843 aa6.4□□□□□ -1.39
GFRA1-204ENST00000439649 KRTAP1-4P0C5Y4 121 aa6.37□□□□□ -1.39
GFRA1-204ENST00000439649 ZFHX4Q86UP3 3567 aa6.31□□□□□ -1.4
GFRA1-204ENST00000439649 WDFY3Q8IZQ1 3526 aa6.31□□□□□ -1.4
GFRA1-204ENST00000439649 KRTAP10-10P60014 251 aa6.28□□□□□ -1.4
GFRA1-204ENST00000439649 KRTAP13-3Q3SY46 172 aa6.26□□□□□ -1.41
GFRA1-204ENST00000439649 DMDP11532 3685 aa6.26□□□□□ -1.41
GFRA1-204ENST00000439649 KRTAP13-4Q3LI77 160 aa6.25□□□□□ -1.41
GFRA1-204ENST00000439649 SPENQ96T58 3664 aaKnown RBP6.25□□□□□ -1.41
GFRA1-204ENST00000439649 SMG1Q96Q15 3661 aaKnown RBP6.18□□□□□ -1.42
GFRA1-204ENST00000439649 RELNP78509 3460 aa6.17□□□□□ -1.42
GFRA1-204ENST00000439649 DCHS1Q96JQ0 3298 aa6.17□□□□□ -1.42
GFRA1-204ENST00000439649 ASPMQ8IZT6 3477 aa6.14□□□□□ -1.43
GFRA1-204ENST00000439649 LAMA5O15230 3695 aa6.11□□□□□ -1.43
GFRA1-204ENST00000439649 INE1O15225 51 aa6.09□□□□□ -1.43
GFRA1-204ENST00000439649 A0A1B0GVY2 172 aa6.09□□□□□ -1.43
GFRA1-204ENST00000439649 KRTAP12-2P59991 146 aa6.08□□□□□ -1.44
GFRA1-204ENST00000439649 TRRAPQ9Y4A5 3859 aa6.06□□□□□ -1.44
GFRA1-204ENST00000439649 KRTAP12-1P59990 96 aa6□□□□□ -1.45
GFRA1-204ENST00000439649 VPS13CQ709C8 3753 aa5.94□□□□□ -1.46
GFRA1-204ENST00000439649 KRTAP15-1Q3LI76 137 aa5.91□□□□□ -1.46
GFRA1-204ENST00000439649 AKAP9Q99996 3911 aa5.84□□□□□ -1.47
GFRA1-204ENST00000439649 KRTAP23-1A1A580 65 aa5.75□□□□□ -1.49
GFRA1-204ENST00000439649 CSMD1Q96PZ7 3565 aa5.73□□□□□ -1.49
GFRA1-204ENST00000439649 CUBNO60494 3623 aa5.72□□□□□ -1.49
GFRA1-204ENST00000439649 MUC3AQ02505 3323 aa5.72□□□□□ -1.49
GFRA1-204ENST00000439649 KRTAP10-6P60371 365 aaPredicted RBP5.69□□□□□ -1.5
GFRA1-204ENST00000439649 KRTAP10-12P60413 245 aa5.66□□□□□ -1.5
GFRA1-204ENST00000439649 KRTAP3-1Q9BYR8 98 aa5.66□□□□□ -1.5
GFRA1-204ENST00000439649 BSNQ9UPA5 3926 aa5.62□□□□□ -1.51
GFRA1-204ENST00000439649 SVEP1Q4LDE5 3571 aa5.62□□□□□ -1.51
GFRA1-204ENST00000439649 CSMD3Q7Z407 3707 aa5.6□□□□□ -1.51
GFRA1-204ENST00000439649 LYSTQ99698 3801 aa5.49□□□□□ -1.53
GFRA1-204ENST00000439649 KRTAP12-3P60328 96 aa5.47□□□□□ -1.53
GFRA1-204ENST00000439649 CSMD2Q7Z408 3487 aa5.43□□□□□ -1.54
GFRA1-204ENST00000439649 KRTAP3-2Q9BYR7 98 aa5.39□□□□□ -1.55
GFRA1-204ENST00000439649 KRTAP3-3Q9BYR6 98 aa5.35□□□□□ -1.55
GFRA1-204ENST00000439649 ANK2Q01484 3957 aa5.26□□□□□ -1.57
GFRA1-204ENST00000439649 ZNF469Q96JG9 3925 aaPredicted RBP5.26□□□□□ -1.57
GFRA1-204ENST00000439649 ALMS1Q8TCU4 4167 aa5.25□□□□□ -1.57
GFRA1-204ENST00000439649 CRCT1Q9UGL9 99 aa5.21□□□□□ -1.57
GFRA1-204ENST00000439649 MT1HL1P0DM35 61 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms