RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 NOTCH2NLQ7Z3S9 236 aa9.54□□□□□ -0.88
CCDC78-204ENST00000439619 A0A1B0GVX0 72 aa9.53□□□□□ -0.88
CCDC78-204ENST00000439619 M0R143 59 aa9.5□□□□□ -0.89
CCDC78-204ENST00000439619 NDUFB1O75438 58 aa9.49□□□□□ -0.89
CCDC78-204ENST00000439619 ATXN8Q156A1 80 aa9.48□□□□□ -0.89
CCDC78-204ENST00000439619 JMJD7-PLA2G4BH0Y9G9 81 aa9.47□□□□□ -0.89
CCDC78-204ENST00000439619 MTURNQ8N3F0 131 aa9.47□□□□□ -0.89
CCDC78-204ENST00000439619 Q6ZQT0 140 aa9.46□□□□□ -0.9
CCDC78-204ENST00000439619 A0A1B0GW54 56 aa9.45□□□□□ -0.9
CCDC78-204ENST00000439619 PDE6GP18545 87 aa9.44□□□□□ -0.9
CCDC78-204ENST00000439619 HRES1P13985 223 aa9.43□□□□□ -0.9
CCDC78-204ENST00000439619 MPLKIPQ8TAP9 179 aa9.42□□□□□ -0.9
CCDC78-204ENST00000439619 ZCCHC13Q8WW36 166 aaKnown RBP9.42□□□□□ -0.9
CCDC78-204ENST00000439619 KRTAP9-8Q9BYQ0 159 aa9.42□□□□□ -0.9
CCDC78-204ENST00000439619 LYRM7Q5U5X0 104 aa9.41□□□□□ -0.9
CCDC78-204ENST00000439619 LOC110117498A0A087WWA1 95 aa9.39□□□□□ -0.91
CCDC78-204ENST00000439619 A8MWP4 228 aa9.37□□□□□ -0.91
CCDC78-204ENST00000439619 NAA38Q9BRA0 125 aaKnown RBP9.37□□□□□ -0.91
CCDC78-204ENST00000439619 SPINK7P58062 85 aa9.35□□□□□ -0.91
CCDC78-204ENST00000439619 Q8N9P0 234 aaPredicted RBP9.34□□□□□ -0.91
CCDC78-204ENST00000439619 C8orf17Q9NRJ1 99 aa9.34□□□□□ -0.91
CCDC78-204ENST00000439619 SMIM6P0DI80 62 aa9.32□□□□□ -0.92
CCDC78-204ENST00000439619 C14orf132Q9NPU4 83 aa9.32□□□□□ -0.92
CCDC78-204ENST00000439619 NREPQ16612 68 aa9.31□□□□□ -0.92
CCDC78-204ENST00000439619 IGKV3D-7A0A0C4DH55 119 aa9.29□□□□□ -0.92
CCDC78-204ENST00000439619 MT2AP02795 61 aa9.29□□□□□ -0.92
CCDC78-204ENST00000439619 TSTD3H0UI37 97 aa9.28□□□□□ -0.92
CCDC78-204ENST00000439619 Q6ZVQ6 151 aa9.28□□□□□ -0.92
CCDC78-204ENST00000439619 KRTAP10-10P60014 251 aa9.26□□□□□ -0.93
CCDC78-204ENST00000439619 PRR15Q8IV56 129 aa9.26□□□□□ -0.93
CCDC78-204ENST00000439619 BATFQ16520 125 aa9.25□□□□□ -0.93
CCDC78-204ENST00000439619 WFDC13Q8IUB5 93 aa9.23□□□□□ -0.93
CCDC78-204ENST00000439619 MT1FP04733 61 aa9.21□□□□□ -0.94
CCDC78-204ENST00000439619 TMEM254Q8TBM7 123 aa9.2□□□□□ -0.94
CCDC78-204ENST00000439619 H3BT86 120 aa9.19□□□□□ -0.94
CCDC78-204ENST00000439619 MRPL34Q9BQ48 92 aaKnown RBP9.19□□□□□ -0.94
CCDC78-204ENST00000439619 NDUFS5O43920 106 aa9.16□□□□□ -0.94
CCDC78-204ENST00000439619 MMP24-AS1A0A0U1RRL7 71 aa9.15□□□□□ -0.94
CCDC78-204ENST00000439619 hDV103S1A0JD37 113 aa9.15□□□□□ -0.94
CCDC78-204ENST00000439619 C9orf118A6NHY6 69 aa9.15□□□□□ -0.94
CCDC78-204ENST00000439619 KRTAP9-3Q9BYQ3 159 aa9.13□□□□□ -0.95
CCDC78-204ENST00000439619 A0A1W2PPM0 123 aa9.12□□□□□ -0.95
CCDC78-204ENST00000439619 K7EQZ3 153 aa9.12□□□□□ -0.95
CCDC78-204ENST00000439619 BPY2O14599 106 aa9.12□□□□□ -0.95
CCDC78-204ENST00000439619 USH2AO75445 5202 aa9.12□□□□□ -0.95
CCDC78-204ENST00000439619 LOC105371267A0A1B0GV96 52 aa9.09□□□□□ -0.95
CCDC78-204ENST00000439619 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.08□□□□□ -0.96
CCDC78-204ENST00000439619 LCE2BO14633 110 aa9.08□□□□□ -0.96
CCDC78-204ENST00000439619 TAX1BP3O14907 124 aa9.07□□□□□ -0.96
CCDC78-204ENST00000439619 H1FX-AS1Q4G0G2 97 aa9.05□□□□□ -0.96
CCDC78-204ENST00000439619 LINC00846Q9NV44 126 aa9.05□□□□□ -0.96
CCDC78-204ENST00000439619 SSPOA2VEC9 5147 aa9.03□□□□□ -0.96
CCDC78-204ENST00000439619 IGKV2D-30A0A075B6S6 120 aa9.02□□□□□ -0.97
CCDC78-204ENST00000439619 KRTAP9-7A8MTY7 169 aa9.02□□□□□ -0.97
CCDC78-204ENST00000439619 IGKV2-30P06310 120 aa9.02□□□□□ -0.97
CCDC78-204ENST00000439619 C7orf65Q6ZTY9 151 aa9.02□□□□□ -0.97
CCDC78-204ENST00000439619 CASC2Q6XLA1 102 aa9.01□□□□□ -0.97
CCDC78-204ENST00000439619 KRTAP19-1Q8IUB9 90 aa9.01□□□□□ -0.97
CCDC78-204ENST00000439619 SPCS1Q9Y6A9 102 aa9□□□□□ -0.97
CCDC78-204ENST00000439619 HCG22E2RYF7 251 aa8.95□□□□□ -0.98
CCDC78-204ENST00000439619 Q8N9L7 120 aa8.95□□□□□ -0.98
CCDC78-204ENST00000439619 CXCL6P80162 114 aa8.94□□□□□ -0.98
CCDC78-204ENST00000439619 Q5W150 140 aa8.94□□□□□ -0.98
CCDC78-204ENST00000439619 UBL5Q9BZL1 73 aa8.94□□□□□ -0.98
CCDC78-204ENST00000439619 FCGBPQ9Y6R7 5405 aaPredicted RBP8.89□□□□□ -0.99
CCDC78-204ENST00000439619 COL5A1-AS1Q5SY13 56 aa8.88□□□□□ -0.99
CCDC78-204ENST00000439619 SMCPP49901 116 aaPredicted RBP8.86□□□□□ -0.99
CCDC78-204ENST00000439619 C4orf26Q17RF5 130 aa8.85□□□□□ -0.99
CCDC78-204ENST00000439619 KRTAP19-6Q3LI70 58 aa8.84□□□□□ -0.99
CCDC78-204ENST00000439619 K7EP34 96 aa8.8□□□□□ -1
CCDC78-204ENST00000439619 PRO0461Q9UI25 63 aa8.79□□□□□ -1
CCDC78-204ENST00000439619 GTF2H5Q6ZYL4 71 aa8.75□□□□□ -1.01
CCDC78-204ENST00000439619 TP53AIP1Q9HCN2 124 aa8.75□□□□□ -1.01
CCDC78-204ENST00000439619 C5orf47Q569G3 176 aa8.73□□□□□ -1.01
CCDC78-204ENST00000439619 FAM236AA0A1B0GUQ0 79 aa8.72□□□□□ -1.01
CCDC78-204ENST00000439619 FAM236BA0A1B0GV22 79 aa8.72□□□□□ -1.01
CCDC78-204ENST00000439619 S4R3F8 94 aa8.71□□□□□ -1.02
CCDC78-204ENST00000439619 C1orf64Q8NEQ6 169 aa8.7□□□□□ -1.02
CCDC78-204ENST00000439619 CSAG1Q6PB30 78 aa8.69□□□□□ -1.02
CCDC78-204ENST00000439619 F8W1H4 67 aa8.68□□□□□ -1.02
CCDC78-204ENST00000439619 MACF1Q9UPN3 7388 aaKnown RBP8.68□□□□□ -1.02
CCDC78-204ENST00000439619 KRTAP3-1Q9BYR8 98 aa8.63□□□□□ -1.03
CCDC78-204ENST00000439619 ETDBQ3ZM63 59 aa8.62□□□□□ -1.03
CCDC78-204ENST00000439619 LCA10Q71F78 164 aa8.6□□□□□ -1.03
CCDC78-204ENST00000439619 SYNE2Q8WXH0 6885 aaKnown RBP8.59□□□□□ -1.03
CCDC78-204ENST00000439619 PCP4L1A6NKN8 68 aa8.53□□□□□ -1.04
CCDC78-204ENST00000439619 CYP4F30PQ9H0H9 118 aa8.53□□□□□ -1.04
CCDC78-204ENST00000439619 TRAV22A0A0B4J277 110 aa8.52□□□□□ -1.05
CCDC78-204ENST00000439619 ACYP1P07311 99 aa8.52□□□□□ -1.05
CCDC78-204ENST00000439619 Q5VV11 94 aa8.52□□□□□ -1.05
CCDC78-204ENST00000439619 LOC101927531A0A1B0GV80 90 aa8.51□□□□□ -1.05
CCDC78-204ENST00000439619 KRTAP6-3Q3LI67 103 aa8.48□□□□□ -1.05
CCDC78-204ENST00000439619 SPRR2GQ9BYE4 73 aa8.48□□□□□ -1.05
CCDC78-204ENST00000439619 A6NN06 94 aa8.47□□□□□ -1.05
CCDC78-204ENST00000439619 ATP5EP2Q5VTU8 51 aa8.47□□□□□ -1.05
CCDC78-204ENST00000439619 KLKP1Q107X0 134 aa8.46□□□□□ -1.06
CCDC78-204ENST00000439619 HIST1H4AP62805 103 aaKnown RBP8.43□□□□□ -1.06
CCDC78-204ENST00000439619 FAM240AA0A1B0GVK7 77 aa8.42□□□□□ -1.06
CCDC78-204ENST00000439619 ATOX1O00244 68 aa8.42□□□□□ -1.06
CCDC78-204ENST00000439619 KRTAP19-8Q3LI54 63 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms