RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.17□□□□□ -0.94
CDC42EP4-202ENST00000439510 NDUFS5O43920 106 aa9.15□□□□□ -0.94
CDC42EP4-202ENST00000439510 WWC2-AS2Q96NR7 200 aa9.14□□□□□ -0.95
CDC42EP4-202ENST00000439510 ZNF706Q9Y5V0 76 aaPredicted RBP9.14□□□□□ -0.95
CDC42EP4-202ENST00000439510 IGHV6-1A0A0B4J1U7 121 aa9.13□□□□□ -0.95
CDC42EP4-202ENST00000439510 MRPL34Q9BQ48 92 aaKnown RBP9.11□□□□□ -0.95
CDC42EP4-202ENST00000439510 PLAC8Q9NZF1 115 aa9.11□□□□□ -0.95
CDC42EP4-202ENST00000439510 LCA10Q71F78 164 aa9.1□□□□□ -0.95
CDC42EP4-202ENST00000439510 LINC01558Q9Y6Z2 57 aa9.1□□□□□ -0.95
CDC42EP4-202ENST00000439510 HYDINQ4G0P3 5121 aa9.1□□□□□ -0.95
CDC42EP4-202ENST00000439510 DNAH2Q9P225 4427 aa9.1□□□□□ -0.95
CDC42EP4-202ENST00000439510 CDK2AP2O75956 126 aa9.09□□□□□ -0.95
CDC42EP4-202ENST00000439510 A6NED7 52 aa9.08□□□□□ -0.96
CDC42EP4-202ENST00000439510 LY6G6CO95867 125 aa9.08□□□□□ -0.96
CDC42EP4-202ENST00000439510 IGLV5-52A0A0A0MRZ9 124 aa9.07□□□□□ -0.96
CDC42EP4-202ENST00000439510 ATP11AUNQ6ZP68 121 aa9.07□□□□□ -0.96
CDC42EP4-202ENST00000439510 PSORS1C2Q9UIG4 136 aa9.07□□□□□ -0.96
CDC42EP4-202ENST00000439510 A0A087X002 238 aa9.06□□□□□ -0.96
CDC42EP4-202ENST00000439510 HRES1P13985 223 aa9.06□□□□□ -0.96
CDC42EP4-202ENST00000439510 NOTCH2NLQ7Z3S9 236 aa9.06□□□□□ -0.96
CDC42EP4-202ENST00000439510 A6NN06 94 aa9.06□□□□□ -0.96
CDC42EP4-202ENST00000439510 C7orf65Q6ZTY9 151 aa9.06□□□□□ -0.96
CDC42EP4-202ENST00000439510 SPAG11AQ6PDA7 123 aa9.05□□□□□ -0.96
CDC42EP4-202ENST00000439510 HECTD4Q9Y4D8 3996 aa9.05□□□□□ -0.96
CDC42EP4-202ENST00000439510 CDC42SE1Q9NRR8 79 aa9.04□□□□□ -0.96
CDC42EP4-202ENST00000439510 A0A087WTM6 91 aa9.04□□□□□ -0.96
CDC42EP4-202ENST00000439510 DNAH8Q96JB1 4490 aa9.04□□□□□ -0.96
CDC42EP4-202ENST00000439510 ZNF861PO60384 105 aa9.03□□□□□ -0.96
CDC42EP4-202ENST00000439510 ANAPC11Q9NYG5 84 aa9.03□□□□□ -0.96
CDC42EP4-202ENST00000439510 KRTAP13-3Q3SY46 172 aa9.01□□□□□ -0.97
CDC42EP4-202ENST00000439510 LINC00313P59037 77 aa9□□□□□ -0.97
CDC42EP4-202ENST00000439510 FRAS1Q86XX4 4008 aa9□□□□□ -0.97
CDC42EP4-202ENST00000439510 RTL8CO15255 209 aa8.99□□□□□ -0.97
CDC42EP4-202ENST00000439510 Q5W150 140 aa8.98□□□□□ -0.97
CDC42EP4-202ENST00000439510 SACSQ9NZJ4 4579 aa8.96□□□□□ -0.97
CDC42EP4-202ENST00000439510 ALMS1Q8TCU4 4167 aa8.96□□□□□ -0.98
CDC42EP4-202ENST00000439510 PRAC1Q96KF2 57 aa8.96□□□□□ -0.98
CDC42EP4-202ENST00000439510 DNAH17Q9UFH2 4485 aa8.94□□□□□ -0.98
CDC42EP4-202ENST00000439510 LINC01554Q52M75 96 aa8.94□□□□□ -0.98
CDC42EP4-202ENST00000439510 KMT2CQ8NEZ4 4911 aaKnown RBP8.93□□□□□ -0.98
CDC42EP4-202ENST00000439510 SPINK7P58062 85 aa8.93□□□□□ -0.98
CDC42EP4-202ENST00000439510 SPINK6Q6UWN8 80 aa8.93□□□□□ -0.98
CDC42EP4-202ENST00000439510 A0A0A0MQY5 61 aa8.91□□□□□ -0.98
CDC42EP4-202ENST00000439510 DNAH6Q9C0G6 4158 aa8.9□□□□□ -0.98
CDC42EP4-202ENST00000439510 IGLV7-43P04211 117 aa8.9□□□□□ -0.99
CDC42EP4-202ENST00000439510 C1orf134Q5TEV5 83 aa8.88□□□□□ -0.99
CDC42EP4-202ENST00000439510 ACYP2P14621 99 aa8.88□□□□□ -0.99
CDC42EP4-202ENST00000439510 CIRBP-AS1Q8TBR5 109 aa8.88□□□□□ -0.99
CDC42EP4-202ENST00000439510 SSBP3-AS1Q7Z2R9 100 aa8.86□□□□□ -0.99
CDC42EP4-202ENST00000439510 DMAC1Q96GE9 116 aa8.85□□□□□ -0.99
CDC42EP4-202ENST00000439510 FAT2Q9NYQ8 4349 aa8.85□□□□□ -0.99
CDC42EP4-202ENST00000439510 ADM2Q7Z4H4 148 aa8.82□□□□□ -1
CDC42EP4-202ENST00000439510 DNAH11Q96DT5 4516 aa8.81□□□□□ -1
CDC42EP4-202ENST00000439510 FAM229AH3BQW9 127 aa8.8□□□□□ -1
CDC42EP4-202ENST00000439510 DNAH5Q8TE73 4624 aa8.8□□□□□ -1
CDC42EP4-202ENST00000439510 RYR2Q92736 4967 aa8.78□□□□□ -1
CDC42EP4-202ENST00000439510 PKD1P98161 4303 aa8.78□□□□□ -1
CDC42EP4-202ENST00000439510 PKHD1P08F94 4074 aa8.78□□□□□ -1
CDC42EP4-202ENST00000439510 IGKV2-30P06310 120 aa8.76□□□□□ -1.01
CDC42EP4-202ENST00000439510 KRTAP10-2P60368 255 aa8.74□□□□□ -1.01
CDC42EP4-202ENST00000439510 RYR3Q15413 4870 aa8.73□□□□□ -1.01
CDC42EP4-202ENST00000439510 KRTAP16-1A8MUX0 517 aa8.71□□□□□ -1.01
CDC42EP4-202ENST00000439510 KRTAP13-2Q52LG2 175 aa8.71□□□□□ -1.02
CDC42EP4-202ENST00000439510 RETNLBQ9BQ08 111 aa8.7□□□□□ -1.02
CDC42EP4-202ENST00000439510 A0A1B0GU69 56 aa8.69□□□□□ -1.02
CDC42EP4-202ENST00000439510 SPATA8Q6RVD6 105 aa8.65□□□□□ -1.03
CDC42EP4-202ENST00000439510 LRP1BQ9NZR2 4599 aa8.6□□□□□ -1.03
CDC42EP4-202ENST00000439510 KRTAP10-1P60331 282 aa8.59□□□□□ -1.03
CDC42EP4-202ENST00000439510 Q6ZSA8 131 aa8.59□□□□□ -1.03
CDC42EP4-202ENST00000439510 KRTAP1-4P0C5Y4 121 aa8.59□□□□□ -1.04
CDC42EP4-202ENST00000439510 IGKV2D-30A0A075B6S6 120 aa8.58□□□□□ -1.04
CDC42EP4-202ENST00000439510 UQCR11O14957 56 aa8.58□□□□□ -1.04
CDC42EP4-202ENST00000439510 PLA2G1BP04054 148 aaKnown RBP8.57□□□□□ -1.04
CDC42EP4-202ENST00000439510 DYNC1H1Q14204 4646 aaKnown RBP8.57□□□□□ -1.04
CDC42EP4-202ENST00000439510 MIR22HGQ0VDD5 57 aa8.56□□□□□ -1.04
CDC42EP4-202ENST00000439510 A0A1B0GVY2 172 aa8.5□□□□□ -1.05
CDC42EP4-202ENST00000439510 VPS13BQ7Z7G8 4022 aa8.49□□□□□ -1.05
CDC42EP4-202ENST00000439510 SPINK1P00995 79 aa8.47□□□□□ -1.05
CDC42EP4-202ENST00000439510 CSAG1Q6PB30 78 aa8.47□□□□□ -1.05
CDC42EP4-202ENST00000439510 APOBP04114 4563 aaKnown RBP8.45□□□□□ -1.06
CDC42EP4-202ENST00000439510 TYMSOSQ8TAI1 123 aa8.44□□□□□ -1.06
CDC42EP4-202ENST00000439510 FAT1Q14517 4588 aa8.43□□□□□ -1.06
CDC42EP4-202ENST00000439510 EPPK1P58107 5090 aaKnown RBP8.42□□□□□ -1.06
CDC42EP4-202ENST00000439510 SMR3BP02814 79 aaPredicted RBP8.41□□□□□ -1.06
CDC42EP4-202ENST00000439510 Q8N1X5 172 aa8.39□□□□□ -1.07
CDC42EP4-202ENST00000439510 RPS29P62273 56 aaKnown RBP8.38□□□□□ -1.07
CDC42EP4-202ENST00000439510 ROMO1P60602 79 aa8.33□□□□□ -1.08
CDC42EP4-202ENST00000439510 LINC00304Q8N9R0 145 aa8.33□□□□□ -1.08
CDC42EP4-202ENST00000439510 KIAA1109Q2LD37 5005 aa8.3□□□□□ -1.08
CDC42EP4-202ENST00000439510 HSPG2P98160 4391 aa8.3□□□□□ -1.08
CDC42EP4-202ENST00000439510 C20orf166-AS1Q96NR2 134 aa8.27□□□□□ -1.09
CDC42EP4-202ENST00000439510 A8MUU9 505 aa8.26□□□□□ -1.09
CDC42EP4-202ENST00000439510 H0YAA0 97 aa8.26□□□□□ -1.09
CDC42EP4-202ENST00000439510 RYR1P21817 5038 aa8.24□□□□□ -1.09
CDC42EP4-202ENST00000439510 KRTAP3-1Q9BYR8 98 aa8.23□□□□□ -1.09
CDC42EP4-202ENST00000439510 P0C880 135 aa8.2□□□□□ -1.1
CDC42EP4-202ENST00000439510 C9orf92A6NGG3 77 aa8.19□□□□□ -1.1
CDC42EP4-202ENST00000439510 A0A1B0GU33 70 aa8.17□□□□□ -1.1
CDC42EP4-202ENST00000439510 PKHD1L1Q86WI1 4243 aa8.17□□□□□ -1.1
CDC42EP4-202ENST00000439510 KRTAP17-1Q9BYP8 105 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms