RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 A0A1B0GVX0 72 aa5.47□□□□□ -1.53
MCF2L-216ENST00000439475 H3BT86 120 aa5.47□□□□□ -1.53
MCF2L-216ENST00000439475 KRTAP19-2Q3LHN2 52 aa5.47□□□□□ -1.53
MCF2L-216ENST00000439475 A0A1W2PPM0 123 aa5.46□□□□□ -1.54
MCF2L-216ENST00000439475 TAX1BP3O14907 124 aa5.46□□□□□ -1.54
MCF2L-216ENST00000439475 C14orf132Q9NPU4 83 aa5.46□□□□□ -1.54
MCF2L-216ENST00000439475 KRTAP16-1A8MUX0 517 aa5.44□□□□□ -1.54
MCF2L-216ENST00000439475 M0R2T5 61 aa5.44□□□□□ -1.54
MCF2L-216ENST00000439475 MT1HP80294 61 aa5.44□□□□□ -1.54
MCF2L-216ENST00000439475 NREPQ16612 68 aa5.44□□□□□ -1.54
MCF2L-216ENST00000439475 NOTCH2NLQ7Z3S9 236 aa5.44□□□□□ -1.54
MCF2L-216ENST00000439475 KRTAP9-2Q9BYQ4 174 aa5.43□□□□□ -1.54
MCF2L-216ENST00000439475 A8MWP4 228 aa5.41□□□□□ -1.54
MCF2L-216ENST00000439475 SPCS1Q9Y6A9 102 aa5.41□□□□□ -1.54
MCF2L-216ENST00000439475 COL5A1-AS1Q5SY13 56 aa5.4□□□□□ -1.54
MCF2L-216ENST00000439475 MTURNQ8N3F0 131 aa5.39□□□□□ -1.55
MCF2L-216ENST00000439475 C8orf17Q9NRJ1 99 aa5.38□□□□□ -1.55
MCF2L-216ENST00000439475 RBM12B-AS1Q9P1G2 102 aa5.37□□□□□ -1.55
MCF2L-216ENST00000439475 IGKV3D-7A0A0C4DH55 119 aa5.36□□□□□ -1.55
MCF2L-216ENST00000439475 FAM236DA0A1B0GTK5 79 aa5.36□□□□□ -1.55
MCF2L-216ENST00000439475 FAM236CP0DP71 79 aa5.36□□□□□ -1.55
MCF2L-216ENST00000439475 PRR15Q8IV56 129 aa5.36□□□□□ -1.55
MCF2L-216ENST00000439475 Q8N9P0 234 aaPredicted RBP5.36□□□□□ -1.55
MCF2L-216ENST00000439475 ZCCHC13Q8WW36 166 aaKnown RBP5.36□□□□□ -1.55
MCF2L-216ENST00000439475 BPY2O14599 106 aa5.34□□□□□ -1.55
MCF2L-216ENST00000439475 Q6ZVQ6 151 aa5.34□□□□□ -1.55
MCF2L-216ENST00000439475 KRTAP10-6P60371 365 aaPredicted RBP5.33□□□□□ -1.56
MCF2L-216ENST00000439475 LCE2DQ5TA82 110 aaPredicted RBP5.33□□□□□ -1.56
MCF2L-216ENST00000439475 GTF2H5Q6ZYL4 71 aa5.32□□□□□ -1.56
MCF2L-216ENST00000439475 MRPL34Q9BQ48 92 aaKnown RBP5.32□□□□□ -1.56
MCF2L-216ENST00000439475 K7EP34 96 aa5.31□□□□□ -1.56
MCF2L-216ENST00000439475 LORP23490 312 aaPredicted RBP5.31□□□□□ -1.56
MCF2L-216ENST00000439475 TMEM254Q8TBM7 123 aa5.31□□□□□ -1.56
MCF2L-216ENST00000439475 hDV103S1A0JD37 113 aa5.3□□□□□ -1.56
MCF2L-216ENST00000439475 PCP4L1A6NKN8 68 aa5.3□□□□□ -1.56
MCF2L-216ENST00000439475 SMCPP49901 116 aaPredicted RBP5.3□□□□□ -1.56
MCF2L-216ENST00000439475 SPINK7P58062 85 aa5.3□□□□□ -1.56
MCF2L-216ENST00000439475 MMP24-AS1A0A0U1RRL7 71 aa5.29□□□□□ -1.56
MCF2L-216ENST00000439475 K7EQZ3 153 aa5.29□□□□□ -1.56
MCF2L-216ENST00000439475 NDUFS5O43920 106 aa5.29□□□□□ -1.56
MCF2L-216ENST00000439475 HRES1P13985 223 aa5.29□□□□□ -1.56
MCF2L-216ENST00000439475 UBL5Q9BZL1 73 aa5.29□□□□□ -1.56
MCF2L-216ENST00000439475 MPLKIPQ8TAP9 179 aa5.27□□□□□ -1.57
MCF2L-216ENST00000439475 F8W1H4 67 aa5.26□□□□□ -1.57
MCF2L-216ENST00000439475 PRO0461Q9UI25 63 aa5.26□□□□□ -1.57
MCF2L-216ENST00000439475 KRTAP9-6A0A140TA67 174 aa5.24□□□□□ -1.57
MCF2L-216ENST00000439475 FLGP20930 4061 aaPredicted RBP5.23□□□□□ -1.57
MCF2L-216ENST00000439475 CASC2Q6XLA1 102 aa5.23□□□□□ -1.57
MCF2L-216ENST00000439475 WFDC13Q8IUB5 93 aa5.23□□□□□ -1.57
MCF2L-216ENST00000439475 LINC00846Q9NV44 126 aa5.23□□□□□ -1.57
MCF2L-216ENST00000439475 HCG22E2RYF7 251 aa5.2□□□□□ -1.58
MCF2L-216ENST00000439475 Q8N9L7 120 aa5.2□□□□□ -1.58
MCF2L-216ENST00000439475 ETDBQ3ZM63 59 aa5.19□□□□□ -1.58
MCF2L-216ENST00000439475 CXCL6P80162 114 aa5.17□□□□□ -1.58
MCF2L-216ENST00000439475 C7orf65Q6ZTY9 151 aa5.17□□□□□ -1.58
MCF2L-216ENST00000439475 IGKV2D-30A0A075B6S6 120 aa5.16□□□□□ -1.58
MCF2L-216ENST00000439475 IGKV2-30P06310 120 aa5.16□□□□□ -1.58
MCF2L-216ENST00000439475 CRCT1Q9UGL9 99 aa5.16□□□□□ -1.58
MCF2L-216ENST00000439475 KRTAP9-8Q9BYQ0 159 aa5.15□□□□□ -1.59
MCF2L-216ENST00000439475 Q5W150 140 aa5.14□□□□□ -1.59
MCF2L-216ENST00000439475 ACYP1P07311 99 aa5.13□□□□□ -1.59
MCF2L-216ENST00000439475 H1FX-AS1Q4G0G2 97 aa5.12□□□□□ -1.59
MCF2L-216ENST00000439475 TP53AIP1Q9HCN2 124 aa5.12□□□□□ -1.59
MCF2L-216ENST00000439475 MT2AP02795 61 aa5.08□□□□□ -1.6
MCF2L-216ENST00000439475 KRTAP10-10P60014 251 aa5.08□□□□□ -1.6
MCF2L-216ENST00000439475 FAM240AA0A1B0GVK7 77 aa5.07□□□□□ -1.6
MCF2L-216ENST00000439475 ATP5EP2Q5VTU8 51 aa5.05□□□□□ -1.6
MCF2L-216ENST00000439475 C4orf26Q17RF5 130 aa5.04□□□□□ -1.6
MCF2L-216ENST00000439475 MT1FP04733 61 aa5.03□□□□□ -1.6
MCF2L-216ENST00000439475 HIST1H4AP62805 103 aaKnown RBP5.02□□□□□ -1.61
MCF2L-216ENST00000439475 FSIP2Q5CZC0 6907 aa5.02□□□□□ -1.61
MCF2L-216ENST00000439475 LINC00643Q86TS7 51 aa4.99□□□□□ -1.61
MCF2L-216ENST00000439475 C1orf64Q8NEQ6 169 aa4.99□□□□□ -1.61
MCF2L-216ENST00000439475 KRTAP9-3Q9BYQ3 159 aa4.99□□□□□ -1.61
MCF2L-216ENST00000439475 TRAV22A0A0B4J277 110 aa4.98□□□□□ -1.61
MCF2L-216ENST00000439475 A0A1B0GV90 55 aa4.98□□□□□ -1.61
MCF2L-216ENST00000439475 LOC101927531A0A1B0GV80 90 aa4.96□□□□□ -1.62
MCF2L-216ENST00000439475 J3QR89 54 aa4.96□□□□□ -1.62
MCF2L-216ENST00000439475 UQCRQO14949 82 aa4.96□□□□□ -1.62
MCF2L-216ENST00000439475 CYP4F30PQ9H0H9 118 aa4.96□□□□□ -1.62
MCF2L-216ENST00000439475 S4R3F8 94 aa4.95□□□□□ -1.62
MCF2L-216ENST00000439475 ATOX1O00244 68 aa4.94□□□□□ -1.62
MCF2L-216ENST00000439475 LCE2BO14633 110 aa4.94□□□□□ -1.62
MCF2L-216ENST00000439475 CSAG1Q6PB30 78 aa4.94□□□□□ -1.62
MCF2L-216ENST00000439475 C5orf47Q569G3 176 aa4.93□□□□□ -1.62
MCF2L-216ENST00000439475 KRTAP3-1Q9BYR8 98 aa4.93□□□□□ -1.62
MCF2L-216ENST00000439475 H0Y9P7 68 aa4.91□□□□□ -1.62
MCF2L-216ENST00000439475 A0A087WVE0 104 aa4.9□□□□□ -1.63
MCF2L-216ENST00000439475 FAM236AA0A1B0GUQ0 79 aa4.89□□□□□ -1.63
MCF2L-216ENST00000439475 FAM236BA0A1B0GV22 79 aa4.89□□□□□ -1.63
MCF2L-216ENST00000439475 MP68P56378 58 aa4.87□□□□□ -1.63
MCF2L-216ENST00000439475 LCA10Q71F78 164 aa4.87□□□□□ -1.63
MCF2L-216ENST00000439475 USH2AO75445 5202 aa4.86□□□□□ -1.63
MCF2L-216ENST00000439475 LINC00208Q96KT6 92 aa4.85□□□□□ -1.63
MCF2L-216ENST00000439475 KRTAP19-1Q8IUB9 90 aa4.84□□□□□ -1.63
MCF2L-216ENST00000439475 SCGB1A1P11684 91 aa4.83□□□□□ -1.64
MCF2L-216ENST00000439475 A8MUN3 132 aa4.82□□□□□ -1.64
MCF2L-216ENST00000439475 OCR1Q9BZK8 76 aa4.82□□□□□ -1.64
MCF2L-216ENST00000439475 H3BPC8 53 aa4.8□□□□□ -1.64
MCF2L-216ENST00000439475 NDUFC1O43677 76 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms