RNA–Protein interactions for RNA: ENST00000438826.7

TVP23C-204, Transcript of trans-golgi network vesicle protein 23 homolog C, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TVP23C, Length 1,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-204ENST00000438826 LIMD2Q9BT23 127 aa10.02□□□□□ -0.8
TVP23C-204ENST00000438826 FAM236DA0A1B0GTK5 79 aa10.02□□□□□ -0.81
TVP23C-204ENST00000438826 FAM236CP0DP71 79 aa10.02□□□□□ -0.81
TVP23C-204ENST00000438826 MP68P56378 58 aa10.02□□□□□ -0.81
TVP23C-204ENST00000438826 APOBP04114 4563 aaKnown RBP10□□□□□ -0.81
TVP23C-204ENST00000438826 C1orf195Q5TG92 126 aa10□□□□□ -0.81
TVP23C-204ENST00000438826 NOTCH2NLQ7Z3S9 236 aa10□□□□□ -0.81
TVP23C-204ENST00000438826 ZCCHC13Q8WW36 166 aaKnown RBP10□□□□□ -0.81
TVP23C-204ENST00000438826 SPINK1P00995 79 aa9.99□□□□□ -0.81
TVP23C-204ENST00000438826 PRR26Q8N8Z3 221 aa9.99□□□□□ -0.81
TVP23C-204ENST00000438826 MRPL34Q9BQ48 92 aaKnown RBP9.98□□□□□ -0.81
TVP23C-204ENST00000438826 TP53AIP1Q9HCN2 124 aa9.98□□□□□ -0.81
TVP23C-204ENST00000438826 H0Y9P7 68 aa9.97□□□□□ -0.81
TVP23C-204ENST00000438826 C8orf87E5RJ46 101 aa9.96□□□□□ -0.82
TVP23C-204ENST00000438826 RPS28P62857 69 aaKnown RBP9.96□□□□□ -0.82
TVP23C-204ENST00000438826 H3BPC8 53 aa9.95□□□□□ -0.82
TVP23C-204ENST00000438826 TRAV22A0A0B4J277 110 aa9.94□□□□□ -0.82
TVP23C-204ENST00000438826 NDUFS5O43920 106 aa9.94□□□□□ -0.82
TVP23C-204ENST00000438826 LINC00208Q96KT6 92 aa9.94□□□□□ -0.82
TVP23C-204ENST00000438826 LINC00304Q8N9R0 145 aa9.93□□□□□ -0.82
TVP23C-204ENST00000438826 ATP5EP56381 51 aaPredicted RBP9.93□□□□□ -0.82
TVP23C-204ENST00000438826 SPAG11AQ6PDA7 123 aa9.92□□□□□ -0.82
TVP23C-204ENST00000438826 LINC00313P59037 77 aa9.91□□□□□ -0.82
TVP23C-204ENST00000438826 RPS29P62273 56 aaKnown RBP9.91□□□□□ -0.82
TVP23C-204ENST00000438826 FAT1Q14517 4588 aa9.91□□□□□ -0.82
TVP23C-204ENST00000438826 FAM229AH3BQW9 127 aa9.89□□□□□ -0.83
TVP23C-204ENST00000438826 C1orf64Q8NEQ6 169 aa9.89□□□□□ -0.83
TVP23C-204ENST00000438826 SERP1Q9Y6X1 66 aa9.85□□□□□ -0.83
TVP23C-204ENST00000438826 RYR3Q15413 4870 aa9.83□□□□□ -0.84
TVP23C-204ENST00000438826 OXTP01178 125 aa9.81□□□□□ -0.84
TVP23C-204ENST00000438826 Q8N9P0 234 aaPredicted RBP9.79□□□□□ -0.84
TVP23C-204ENST00000438826 Q5VSD8 79 aa9.79□□□□□ -0.84
TVP23C-204ENST00000438826 KRTAP16-1A8MUX0 517 aa9.77□□□□□ -0.85
TVP23C-204ENST00000438826 Q5W150 140 aa9.76□□□□□ -0.85
TVP23C-204ENST00000438826 KRTAP13-3Q3SY46 172 aa9.74□□□□□ -0.85
TVP23C-204ENST00000438826 SPANXA2-OT1Q8N9U9 137 aa9.74□□□□□ -0.85
TVP23C-204ENST00000438826 PKHD1L1Q86WI1 4243 aa9.74□□□□□ -0.85
TVP23C-204ENST00000438826 CYP4F30PQ9H0H9 118 aa9.72□□□□□ -0.85
TVP23C-204ENST00000438826 HSPG2P98160 4391 aa9.72□□□□□ -0.85
TVP23C-204ENST00000438826 LOC101927531A0A1B0GV80 90 aa9.71□□□□□ -0.85
TVP23C-204ENST00000438826 PRR4Q16378 134 aa9.71□□□□□ -0.85
TVP23C-204ENST00000438826 PCOTHQ58A44 107 aa9.7□□□□□ -0.86
TVP23C-204ENST00000438826 IGLV7-46A0A075B6I9 117 aa9.66□□□□□ -0.86
TVP23C-204ENST00000438826 KRTAP10-8P60410 259 aa9.65□□□□□ -0.86
TVP23C-204ENST00000438826 RYR1P21817 5038 aa9.64□□□□□ -0.87
TVP23C-204ENST00000438826 SMIM26A0A096LP01 95 aa9.64□□□□□ -0.87
TVP23C-204ENST00000438826 RETNLBQ9BQ08 111 aa9.64□□□□□ -0.87
TVP23C-204ENST00000438826 Q8N1X5 172 aa9.63□□□□□ -0.87
TVP23C-204ENST00000438826 KRTAP17-1Q9BYP8 105 aa9.62□□□□□ -0.87
TVP23C-204ENST00000438826 FLG2Q5D862 2391 aaPredicted RBP9.57□□□□□ -0.88
TVP23C-204ENST00000438826 IGKV2-30P06310 120 aa9.57□□□□□ -0.88
TVP23C-204ENST00000438826 C9orf92A6NGG3 77 aa9.56□□□□□ -0.88
TVP23C-204ENST00000438826 TNXBP22105 4242 aa9.55□□□□□ -0.88
TVP23C-204ENST00000438826 FP248Q71RG6 208 aaPredicted RBP9.55□□□□□ -0.88
TVP23C-204ENST00000438826 LRP1Q07954 4544 aaKnown RBP9.55□□□□□ -0.88
TVP23C-204ENST00000438826 KIAA1109Q2LD37 5005 aa9.53□□□□□ -0.88
TVP23C-204ENST00000438826 C20orf166-AS1Q96NR2 134 aa9.51□□□□□ -0.89
TVP23C-204ENST00000438826 A8MUU9 505 aa9.5□□□□□ -0.89
TVP23C-204ENST00000438826 HRES1P13985 223 aa9.49□□□□□ -0.89
TVP23C-204ENST00000438826 IGKV2D-30A0A075B6S6 120 aa9.49□□□□□ -0.89
TVP23C-204ENST00000438826 EPPK1P58107 5090 aaKnown RBP9.48□□□□□ -0.89
TVP23C-204ENST00000438826 C4orf26Q17RF5 130 aa9.47□□□□□ -0.89
TVP23C-204ENST00000438826 COA5Q86WW8 74 aa9.47□□□□□ -0.89
TVP23C-204ENST00000438826 MPLKIPQ8TAP9 179 aa9.45□□□□□ -0.9
TVP23C-204ENST00000438826 MT1HL1P0DM35 61 aa9.45□□□□□ -0.9
TVP23C-204ENST00000438826 FAT3Q8TDW7 4589 aa9.44□□□□□ -0.9
TVP23C-204ENST00000438826 C7orf65Q6ZTY9 151 aa9.41□□□□□ -0.9
TVP23C-204ENST00000438826 DMBT1Q9UGM3 2413 aaPredicted RBP9.4□□□□□ -0.9
TVP23C-204ENST00000438826 Q1T7F1 81 aa9.39□□□□□ -0.91
TVP23C-204ENST00000438826 Q75L30 129 aa9.39□□□□□ -0.91
TVP23C-204ENST00000438826 DMAC1Q96GE9 116 aa9.39□□□□□ -0.91
TVP23C-204ENST00000438826 ACYP2P14621 99 aa9.38□□□□□ -0.91
TVP23C-204ENST00000438826 MYCBP2O75592 4640 aa9.35□□□□□ -0.91
TVP23C-204ENST00000438826 V9GYY9 64 aa9.33□□□□□ -0.92
TVP23C-204ENST00000438826 KRTAP4-5Q9BYR2 181 aa9.3□□□□□ -0.92
TVP23C-204ENST00000438826 SPINK7P58062 85 aa9.25□□□□□ -0.93
TVP23C-204ENST00000438826 ATP11AUNQ6ZP68 121 aa9.25□□□□□ -0.93
TVP23C-204ENST00000438826 CHKB-CPT1BH3BT56 60 aa9.25□□□□□ -0.93
TVP23C-204ENST00000438826 RPL37P61927 97 aaKnown RBP9.24□□□□□ -0.93
TVP23C-204ENST00000438826 XP32Q5T750 250 aa9.24□□□□□ -0.93
TVP23C-204ENST00000438826 PSPHP1O15172 72 aa9.23□□□□□ -0.93
TVP23C-204ENST00000438826 A8MUN3 132 aa9.21□□□□□ -0.94
TVP23C-204ENST00000438826 LINC01558Q9Y6Z2 57 aa9.17□□□□□ -0.94
TVP23C-204ENST00000438826 PRR15LQ9BU68 103 aa9.15□□□□□ -0.94
TVP23C-204ENST00000438826 TPRXLQ17RH7 258 aa9.13□□□□□ -0.95
TVP23C-204ENST00000438826 Q5VV11 94 aa9.13□□□□□ -0.95
TVP23C-204ENST00000438826 KRTAP3-1Q9BYR8 98 aa9.08□□□□□ -0.96
TVP23C-204ENST00000438826 J3QL48 77 aa9.05□□□□□ -0.96
TVP23C-204ENST00000438826 COX6B2Q6YFQ2 88 aa9.05□□□□□ -0.96
TVP23C-204ENST00000438826 BRK1Q8WUW1 75 aa9.04□□□□□ -0.96
TVP23C-204ENST00000438826 ABCA13Q86UQ4 5058 aa9.01□□□□□ -0.97
TVP23C-204ENST00000438826 BIRC6Q9NR09 4857 aa8.99□□□□□ -0.97
TVP23C-204ENST00000438826 SPTSSBQ8NFR3 76 aa8.98□□□□□ -0.97
TVP23C-204ENST00000438826 PRO0628Q9UI54 55 aa8.98□□□□□ -0.97
TVP23C-204ENST00000438826 HERC2O95714 4834 aa8.96□□□□□ -0.98
TVP23C-204ENST00000438826 A0A1B0GU69 56 aa8.96□□□□□ -0.98
TVP23C-204ENST00000438826 A6NED7 52 aa8.94□□□□□ -0.98
TVP23C-204ENST00000438826 LRP2P98164 4655 aa8.88□□□□□ -0.99
TVP23C-204ENST00000438826 LPAP08519 4548 aa8.88□□□□□ -0.99
TVP23C-204ENST00000438826 SVIPQ8NHG7 77 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms