RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 LIMD2Q9BT23 127 aa7.12□□□□□ -1.27
HLA-DOB-206ENST00000438763 IMUPQ9GZP8 106 aa7.12□□□□□ -1.27
HLA-DOB-206ENST00000438763 J3KT08 172 aa7.1□□□□□ -1.27
HLA-DOB-206ENST00000438763 Q96NJ1 140 aa7.1□□□□□ -1.27
HLA-DOB-206ENST00000438763 DEFB116Q30KQ4 102 aa7.09□□□□□ -1.27
HLA-DOB-206ENST00000438763 XP32Q5T750 250 aa7.09□□□□□ -1.27
HLA-DOB-206ENST00000438763 OXTP01178 125 aa7.08□□□□□ -1.28
HLA-DOB-206ENST00000438763 DSCR10P59022 87 aa7.08□□□□□ -1.28
HLA-DOB-206ENST00000438763 IGKV4-1P06312 121 aa7.07□□□□□ -1.28
HLA-DOB-206ENST00000438763 TNXBP22105 4242 aa7.07□□□□□ -1.28
HLA-DOB-206ENST00000438763 HIST1H4AP62805 103 aaKnown RBP7.06□□□□□ -1.28
HLA-DOB-206ENST00000438763 A8MWP4 228 aa7.05□□□□□ -1.28
HLA-DOB-206ENST00000438763 MT1HL1P0DM35 61 aa7.05□□□□□ -1.28
HLA-DOB-206ENST00000438763 C1orf195Q5TG92 126 aa7.05□□□□□ -1.28
HLA-DOB-206ENST00000438763 NDUFB1O75438 58 aa7.03□□□□□ -1.28
HLA-DOB-206ENST00000438763 Q8N9L7 120 aa7.03□□□□□ -1.28
HLA-DOB-206ENST00000438763 K7EQZ3 153 aa7.02□□□□□ -1.29
HLA-DOB-206ENST00000438763 PRR15Q8IV56 129 aa7.02□□□□□ -1.29
HLA-DOB-206ENST00000438763 A0A087WVE0 104 aa7.01□□□□□ -1.29
HLA-DOB-206ENST00000438763 KRTAP9-2Q9BYQ4 174 aa7□□□□□ -1.29
HLA-DOB-206ENST00000438763 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.99□□□□□ -1.29
HLA-DOB-206ENST00000438763 A0A1B0GVX0 72 aa6.98□□□□□ -1.29
HLA-DOB-206ENST00000438763 SCGB1A1P11684 91 aa6.98□□□□□ -1.29
HLA-DOB-206ENST00000438763 IGHV6-1A0A0B4J1U7 121 aa6.95□□□□□ -1.3
HLA-DOB-206ENST00000438763 KRTAP9-6A0A140TA67 174 aa6.95□□□□□ -1.3
HLA-DOB-206ENST00000438763 FAM236AA0A1B0GUQ0 79 aa6.95□□□□□ -1.3
HLA-DOB-206ENST00000438763 FAM236BA0A1B0GV22 79 aa6.95□□□□□ -1.3
HLA-DOB-206ENST00000438763 HCG22E2RYF7 251 aa6.94□□□□□ -1.3
HLA-DOB-206ENST00000438763 C8orf87E5RJ46 101 aa6.94□□□□□ -1.3
HLA-DOB-206ENST00000438763 C8orf17Q9NRJ1 99 aa6.94□□□□□ -1.3
HLA-DOB-206ENST00000438763 MMP24-AS1A0A0U1RRL7 71 aa6.93□□□□□ -1.3
HLA-DOB-206ENST00000438763 CASC2Q6XLA1 102 aa6.91□□□□□ -1.3
HLA-DOB-206ENST00000438763 RETNLBQ9BQ08 111 aa6.91□□□□□ -1.3
HLA-DOB-206ENST00000438763 LINC00313P59037 77 aa6.9□□□□□ -1.31
HLA-DOB-206ENST00000438763 WFDC13Q8IUB5 93 aa6.9□□□□□ -1.31
HLA-DOB-206ENST00000438763 hDV103S1A0JD37 113 aa6.89□□□□□ -1.31
HLA-DOB-206ENST00000438763 FP248Q71RG6 208 aaPredicted RBP6.89□□□□□ -1.31
HLA-DOB-206ENST00000438763 NOTCH2NLQ7Z3S9 236 aa6.89□□□□□ -1.31
HLA-DOB-206ENST00000438763 ATOX1O00244 68 aa6.88□□□□□ -1.31
HLA-DOB-206ENST00000438763 FAT4Q6V0I7 4981 aa6.88□□□□□ -1.31
HLA-DOB-206ENST00000438763 TMEM254Q8TBM7 123 aa6.87□□□□□ -1.31
HLA-DOB-206ENST00000438763 SMIM20Q8N5G0 67 aa6.85□□□□□ -1.31
HLA-DOB-206ENST00000438763 MRPL34Q9BQ48 92 aaKnown RBP6.85□□□□□ -1.31
HLA-DOB-206ENST00000438763 LPAP08519 4548 aa6.84□□□□□ -1.31
HLA-DOB-206ENST00000438763 IGLV7-46A0A075B6I9 117 aa6.82□□□□□ -1.32
HLA-DOB-206ENST00000438763 KRTAP16-1A8MUX0 517 aa6.82□□□□□ -1.32
HLA-DOB-206ENST00000438763 ANAPC13Q9BS18 74 aa6.82□□□□□ -1.32
HLA-DOB-206ENST00000438763 OCR1Q9BZK8 76 aa6.82□□□□□ -1.32
HLA-DOB-206ENST00000438763 TRAV7A0A075B6U4 112 aa6.81□□□□□ -1.32
HLA-DOB-206ENST00000438763 Q8N9P0 234 aaPredicted RBP6.8□□□□□ -1.32
HLA-DOB-206ENST00000438763 MUC2Q02817 5179 aa6.79□□□□□ -1.32
HLA-DOB-206ENST00000438763 C9orf92A6NGG3 77 aa6.79□□□□□ -1.32
HLA-DOB-206ENST00000438763 PRR4Q16378 134 aa6.79□□□□□ -1.32
HLA-DOB-206ENST00000438763 SERP2Q8N6R1 65 aa6.79□□□□□ -1.32
HLA-DOB-206ENST00000438763 TP53AIP1Q9HCN2 124 aa6.79□□□□□ -1.32
HLA-DOB-206ENST00000438763 UQCRQO14949 82 aa6.77□□□□□ -1.33
HLA-DOB-206ENST00000438763 NDUFS5O43920 106 aa6.77□□□□□ -1.33
HLA-DOB-206ENST00000438763 COX7CP15954 63 aa6.75□□□□□ -1.33
HLA-DOB-206ENST00000438763 KRTAP13-3Q3SY46 172 aa6.75□□□□□ -1.33
HLA-DOB-206ENST00000438763 LCE3BQ5TA77 95 aa6.75□□□□□ -1.33
HLA-DOB-206ENST00000438763 PCP4P48539 62 aa6.74□□□□□ -1.33
HLA-DOB-206ENST00000438763 A8MUU9 505 aa6.73□□□□□ -1.33
HLA-DOB-206ENST00000438763 C5orf47Q569G3 176 aa6.73□□□□□ -1.33
HLA-DOB-206ENST00000438763 C20orf166-AS1Q96NR2 134 aa6.73□□□□□ -1.33
HLA-DOB-206ENST00000438763 TPRXLQ17RH7 258 aa6.72□□□□□ -1.33
HLA-DOB-206ENST00000438763 Q75L30 129 aa6.69□□□□□ -1.34
HLA-DOB-206ENST00000438763 TRAV22A0A0B4J277 110 aa6.69□□□□□ -1.34
HLA-DOB-206ENST00000438763 H0Y9P7 68 aa6.68□□□□□ -1.34
HLA-DOB-206ENST00000438763 MP68P56378 58 aa6.68□□□□□ -1.34
HLA-DOB-206ENST00000438763 Q5W150 140 aa6.68□□□□□ -1.34
HLA-DOB-206ENST00000438763 KRTAP4-12Q9BQ66 201 aa6.68□□□□□ -1.34
HLA-DOB-206ENST00000438763 FSIP2Q5CZC0 6907 aa6.67□□□□□ -1.34
HLA-DOB-206ENST00000438763 H3BPC8 53 aa6.66□□□□□ -1.34
HLA-DOB-206ENST00000438763 CCDC179H3BU77 68 aa6.66□□□□□ -1.34
HLA-DOB-206ENST00000438763 C20orf197Q8N268 126 aa6.66□□□□□ -1.34
HLA-DOB-206ENST00000438763 RPL37P61927 97 aaKnown RBP6.65□□□□□ -1.35
HLA-DOB-206ENST00000438763 ZCCHC13Q8WW36 166 aaKnown RBP6.65□□□□□ -1.35
HLA-DOB-206ENST00000438763 KRTAP4-8A0A0G2JLE6 195 aa6.63□□□□□ -1.35
HLA-DOB-206ENST00000438763 A0A0U1RQV1 116 aa6.63□□□□□ -1.35
HLA-DOB-206ENST00000438763 LINC00208Q96KT6 92 aa6.63□□□□□ -1.35
HLA-DOB-206ENST00000438763 KLKP1Q107X0 134 aa6.62□□□□□ -1.35
HLA-DOB-206ENST00000438763 KRTAP9-9Q9BYP9 154 aa6.62□□□□□ -1.35
HLA-DOB-206ENST00000438763 KRTAP9-4Q9BYQ2 154 aa6.62□□□□□ -1.35
HLA-DOB-206ENST00000438763 C1orf64Q8NEQ6 169 aa6.61□□□□□ -1.35
HLA-DOB-206ENST00000438763 ATP11AUNQ6ZP68 121 aa6.6□□□□□ -1.35
HLA-DOB-206ENST00000438763 SNURFQ9Y675 71 aa6.6□□□□□ -1.35
HLA-DOB-206ENST00000438763 LOC101927531A0A1B0GV80 90 aa6.58□□□□□ -1.36
HLA-DOB-206ENST00000438763 IGKV2-30P06310 120 aa6.57□□□□□ -1.36
HLA-DOB-206ENST00000438763 NDUFC1O43677 76 aa6.56□□□□□ -1.36
HLA-DOB-206ENST00000438763 CYP4F30PQ9H0H9 118 aa6.55□□□□□ -1.36
HLA-DOB-206ENST00000438763 CYSTM1Q9H1C7 97 aa6.54□□□□□ -1.36
HLA-DOB-206ENST00000438763 IGKV2D-30A0A075B6S6 120 aa6.52□□□□□ -1.37
HLA-DOB-206ENST00000438763 C7orf65Q6ZTY9 151 aa6.52□□□□□ -1.37
HLA-DOB-206ENST00000438763 H7BZZ5 65 aa6.51□□□□□ -1.37
HLA-DOB-206ENST00000438763 PCOTHQ58A44 107 aa6.51□□□□□ -1.37
HLA-DOB-206ENST00000438763 CRCT1Q9UGL9 99 aa6.51□□□□□ -1.37
HLA-DOB-206ENST00000438763 SEC61BP60468 96 aaKnown RBP6.5□□□□□ -1.37
HLA-DOB-206ENST00000438763 SPINK7P58062 85 aa6.49□□□□□ -1.37
HLA-DOB-206ENST00000438763 MUC17Q685J3 4493 aa6.45□□□□□ -1.38
HLA-DOB-206ENST00000438763 TMEM258P61165 79 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms