RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 UBE2D4Q9Y2X8 147 aa0.85□□□□□ -2.27
HMGB1P31-201ENST00000437242 MDN1Q9NU22 5596 aa0.85□□□□□ -2.27
HMGB1P31-201ENST00000437242 TRBV20-1A0A075B6N2 111 aa0.84□□□□□ -2.27
HMGB1P31-201ENST00000437242 GVQW2A0A096LPI5 108 aaPredicted RBP0.84□□□□□ -2.27
HMGB1P31-201ENST00000437242 TRBV6-8A0A0A6YYG3 113 aa0.84□□□□□ -2.27
HMGB1P31-201ENST00000437242 TRBV30A0A0K0K1B3 111 aa0.84□□□□□ -2.27
HMGB1P31-201ENST00000437242 TRBV10-2A0A0K0K1G8 114 aa0.84□□□□□ -2.27
HMGB1P31-201ENST00000437242 MYMXA0A1B0GTQ4 84 aa0.84□□□□□ -2.27
HMGB1P31-201ENST00000437242 A0A1B0GX51 115 aa0.84□□□□□ -2.27
HMGB1P31-201ENST00000437242 NDUFA1O15239 70 aa0.84□□□□□ -2.27
HMGB1P31-201ENST00000437242 NDUFC2O95298 119 aa0.84□□□□□ -2.27
HMGB1P31-201ENST00000437242 MT1FP04733 61 aa0.84□□□□□ -2.27
HMGB1P31-201ENST00000437242 CNBPP62633 177 aaKnown RBP0.84□□□□□ -2.27
HMGB1P31-201ENST00000437242 PMAIP1Q13794 54 aa0.84□□□□□ -2.27
HMGB1P31-201ENST00000437242 COX17Q14061 63 aa0.84□□□□□ -2.27
HMGB1P31-201ENST00000437242 Q1T7F1 81 aa0.84□□□□□ -2.27
HMGB1P31-201ENST00000437242 ASB16-AS1Q495Z4 193 aa0.84□□□□□ -2.27
HMGB1P31-201ENST00000437242 C1orf137Q5JT78 98 aa0.84□□□□□ -2.27
HMGB1P31-201ENST00000437242 ATOH7Q8N100 152 aa0.84□□□□□ -2.27
HMGB1P31-201ENST00000437242 PRADC1Q9BSG0 188 aa0.84□□□□□ -2.27
HMGB1P31-201ENST00000437242 PRO1933Q9H354 126 aa0.84□□□□□ -2.27
HMGB1P31-201ENST00000437242 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 LINC00959A0A1B0GUT2 108 aa0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 A0A1B0GV90 55 aa0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 TMEM238C9JI98 176 aa0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 F8W1H4 67 aa0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 MT2AP02795 61 aa0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 SMIM13P0DJ93 91 aa0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 CRYGAP11844 174 aa0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 RPL39P62891 51 aaKnown RBP0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 ZNF56Q15929 161 aa0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 MEIG1Q5JSS6 88 aa0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 C2orf82Q6UX34 121 aa0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 UNQ6190/PRO20217Q6UXQ8 127 aa0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 C7orf65Q6ZTY9 151 aa0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 GTF2H5Q6ZYL4 71 aa0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 FP248Q71RG6 208 aaPredicted RBP0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 Q8IZM0 81 aa0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 LINC00269Q8N2A0 174 aa0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 COPS9Q8WXC6 57 aa0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 DPH3Q96FX2 82 aa0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 CARD19Q96LW7 228 aa0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 CDKN2A-AS1Q9UH64 79 aa0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 PRO1854Q9UHT4 67 aa0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 DSTQ03001 7570 aaKnown RBP0.83□□□□□ -2.28
HMGB1P31-201ENST00000437242 IGKV3D-7A0A0C4DH55 119 aa0.82□□□□□ -2.28
HMGB1P31-201ENST00000437242 IGKV3OR2-268A0A0C4DH90 116 aa0.82□□□□□ -2.28
HMGB1P31-201ENST00000437242 TRBV7-6A0A0J9YX20 115 aa0.82□□□□□ -2.28
HMGB1P31-201ENST00000437242 A0A1W2PPM0 123 aa0.82□□□□□ -2.28
HMGB1P31-201ENST00000437242 ZNF815PA8K554 130 aa0.82□□□□□ -2.28
HMGB1P31-201ENST00000437242 H3BMG7 143 aa0.82□□□□□ -2.28
HMGB1P31-201ENST00000437242 K7EP34 96 aa0.82□□□□□ -2.28
HMGB1P31-201ENST00000437242 CRPP02741 224 aa0.82□□□□□ -2.28
HMGB1P31-201ENST00000437242 MGPP08493 103 aa0.82□□□□□ -2.28
HMGB1P31-201ENST00000437242 KRTAP19-6Q3LI70 58 aa0.82□□□□□ -2.28
HMGB1P31-201ENST00000437242 C9orf116Q5BN46 136 aaPredicted RBP0.82□□□□□ -2.28
HMGB1P31-201ENST00000437242 FAM74A4Q5TZK3 123 aa0.82□□□□□ -2.28
HMGB1P31-201ENST00000437242 LYRM7Q5U5X0 104 aa0.82□□□□□ -2.28
HMGB1P31-201ENST00000437242 Q6ZUT4 128 aa0.82□□□□□ -2.28
HMGB1P31-201ENST00000437242 MUSTN1Q8IVN3 82 aa0.82□□□□□ -2.28
HMGB1P31-201ENST00000437242 LINC00308Q8TCZ7 52 aa0.82□□□□□ -2.28
HMGB1P31-201ENST00000437242 OBSCN-AS1Q96MR7 158 aa0.82□□□□□ -2.28
HMGB1P31-201ENST00000437242 NDUFA12Q9UI09 145 aa0.82□□□□□ -2.28
HMGB1P31-201ENST00000437242 MUC5BQ9HC84 5762 aaPredicted RBP0.82□□□□□ -2.28
HMGB1P31-201ENST00000437242 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.81□□□□□ -2.28
HMGB1P31-201ENST00000437242 TRAV13-2A0A0B4J235 113 aa0.81□□□□□ -2.28
HMGB1P31-201ENST00000437242 TMEM262E9PQX1 116 aa0.81□□□□□ -2.28
HMGB1P31-201ENST00000437242 H0YGX0 51 aa0.81□□□□□ -2.28
HMGB1P31-201ENST00000437242 K7ERU9 68 aa0.81□□□□□ -2.28
HMGB1P31-201ENST00000437242 M0R2T5 61 aa0.81□□□□□ -2.28
HMGB1P31-201ENST00000437242 TRACP01848 142 aa0.81□□□□□ -2.28
HMGB1P31-201ENST00000437242 FABP2P12104 132 aa0.81□□□□□ -2.28
HMGB1P31-201ENST00000437242 SPRR1AP35321 89 aa0.81□□□□□ -2.28
HMGB1P31-201ENST00000437242 TMEM170BQ5T4T1 132 aa0.81□□□□□ -2.28
HMGB1P31-201ENST00000437242 Q6Q795 121 aa0.81□□□□□ -2.28
HMGB1P31-201ENST00000437242 SOSTDC1Q6X4U4 206 aa0.81□□□□□ -2.28
HMGB1P31-201ENST00000437242 TEN1Q86WV5 123 aa0.81□□□□□ -2.28
HMGB1P31-201ENST00000437242 COX7B2Q8TF08 81 aa0.81□□□□□ -2.28
HMGB1P31-201ENST00000437242 IMUPQ9GZP8 106 aa0.81□□□□□ -2.28
HMGB1P31-201ENST00000437242 ERG28Q9UKR5 140 aa0.81□□□□□ -2.28
HMGB1P31-201ENST00000437242 C22orf24Q9Y442 160 aa0.81□□□□□ -2.28
HMGB1P31-201ENST00000437242 SPCS1Q9Y6A9 102 aa0.81□□□□□ -2.28
HMGB1P31-201ENST00000437242 H3BUT2 72 aa0.8□□□□□ -2.28
HMGB1P31-201ENST00000437242 J3QR89 54 aa0.8□□□□□ -2.28
HMGB1P31-201ENST00000437242 BCE1O60756 84 aa0.8□□□□□ -2.28
HMGB1P31-201ENST00000437242 TCL1BO95988 128 aa0.8□□□□□ -2.28
HMGB1P31-201ENST00000437242 ACYP1P07311 99 aa0.8□□□□□ -2.28
HMGB1P31-201ENST00000437242 COX6CP09669 75 aa0.8□□□□□ -2.28
HMGB1P31-201ENST00000437242 SCGB1A1P11684 91 aa0.8□□□□□ -2.28
HMGB1P31-201ENST00000437242 OCIAD2Q56VL3 154 aa0.8□□□□□ -2.28
HMGB1P31-201ENST00000437242 ANKRD29Q8N6D5 301 aa0.8□□□□□ -2.28
HMGB1P31-201ENST00000437242 PPDPFLQ8WWR9 84 aa0.8□□□□□ -2.28
HMGB1P31-201ENST00000437242 TMEM126AQ9H061 195 aa0.8□□□□□ -2.28
HMGB1P31-201ENST00000437242 NHP2Q9NX24 153 aaKnown RBP0.8□□□□□ -2.28
HMGB1P31-201ENST00000437242 IGLV5-48A0A075B6I7 105 aa0.79□□□□□ -2.28
HMGB1P31-201ENST00000437242 LOC110117498A0A087WWA1 95 aa0.79□□□□□ -2.28
HMGB1P31-201ENST00000437242 TRAV13-1A0A0B4J241 112 aa0.79□□□□□ -2.28
HMGB1P31-201ENST00000437242 TRBV10-3A0A0K0K1G6 114 aa0.79□□□□□ -2.28
HMGB1P31-201ENST00000437242 JMJD7-PLA2G4BH0Y9G9 81 aa0.79□□□□□ -2.28
HMGB1P31-201ENST00000437242 TMEM256-PLSCR3K7ERE1 68 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 1017.7 ms