RNA–Protein interactions for RNA: ENST00000436842.5

RNASEH1-202, Transcript of ribonuclease H1, humanhuman

TSL 2

Gene RNASEH1, Length 2,120 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNASEH1-202ENST00000436842 CD164Q04900 197 aa12.62□□□□□ -0.39
RNASEH1-202ENST00000436842 MPLKIPQ8TAP9 179 aa12.62□□□□□ -0.39
RNASEH1-202ENST00000436842 SACSQ9NZJ4 4579 aa12.62□□□□□ -0.39
RNASEH1-202ENST00000436842 IGHV6-1A0A0B4J1U7 121 aa12.62□□□□□ -0.39
RNASEH1-202ENST00000436842 SPANXA2-OT1Q8N9U9 137 aa12.61□□□□□ -0.39
RNASEH1-202ENST00000436842 CDK2AP2O75956 126 aa12.6□□□□□ -0.39
RNASEH1-202ENST00000436842 A0A087X002 238 aa12.59□□□□□ -0.39
RNASEH1-202ENST00000436842 LINC00336Q6ZUF6 198 aa12.59□□□□□ -0.39
RNASEH1-202ENST00000436842 TP53AIP1Q9HCN2 124 aa12.58□□□□□ -0.4
RNASEH1-202ENST00000436842 NOTCH2NLQ7Z3S9 236 aa12.58□□□□□ -0.4
RNASEH1-202ENST00000436842 VPS13BQ7Z7G8 4022 aa12.57□□□□□ -0.4
RNASEH1-202ENST00000436842 KRTAP13-2Q52LG2 175 aa12.55□□□□□ -0.4
RNASEH1-202ENST00000436842 SPINK6Q6UWN8 80 aa12.54□□□□□ -0.4
RNASEH1-202ENST00000436842 PKHD1P08F94 4074 aa12.54□□□□□ -0.4
RNASEH1-202ENST00000436842 MRPL34Q9BQ48 92 aaKnown RBP12.52□□□□□ -0.4
RNASEH1-202ENST00000436842 KRTAP1-4P0C5Y4 121 aa12.5□□□□□ -0.41
RNASEH1-202ENST00000436842 Q1T7F1 81 aa12.5□□□□□ -0.41
RNASEH1-202ENST00000436842 NDUFS5O43920 106 aa12.46□□□□□ -0.42
RNASEH1-202ENST00000436842 IGLV7-46A0A075B6I9 117 aa12.44□□□□□ -0.42
RNASEH1-202ENST00000436842 PRO0628Q9UI54 55 aa12.41□□□□□ -0.42
RNASEH1-202ENST00000436842 PCOTHQ58A44 107 aa12.4□□□□□ -0.42
RNASEH1-202ENST00000436842 RYR2Q92736 4967 aa12.4□□□□□ -0.42
RNASEH1-202ENST00000436842 KMT2CQ8NEZ4 4911 aaKnown RBP12.39□□□□□ -0.43
RNASEH1-202ENST00000436842 C1orf195Q5TG92 126 aa12.37□□□□□ -0.43
RNASEH1-202ENST00000436842 KRTAP13-3Q3SY46 172 aa12.37□□□□□ -0.43
RNASEH1-202ENST00000436842 PLA2G1BP04054 148 aaKnown RBP12.36□□□□□ -0.43
RNASEH1-202ENST00000436842 DYNC1H1Q14204 4646 aaKnown RBP12.36□□□□□ -0.43
RNASEH1-202ENST00000436842 C8orf87E5RJ46 101 aa12.35□□□□□ -0.43
RNASEH1-202ENST00000436842 Q5W150 140 aa12.35□□□□□ -0.43
RNASEH1-202ENST00000436842 A0A1B0GVY2 172 aa12.32□□□□□ -0.44
RNASEH1-202ENST00000436842 BRK1Q8WUW1 75 aa12.32□□□□□ -0.44
RNASEH1-202ENST00000436842 Q8N9P0 234 aaPredicted RBP12.31□□□□□ -0.44
RNASEH1-202ENST00000436842 LIMD2Q9BT23 127 aa12.31□□□□□ -0.44
RNASEH1-202ENST00000436842 COA5Q86WW8 74 aa12.3□□□□□ -0.44
RNASEH1-202ENST00000436842 TYMSOSQ8TAI1 123 aa12.29□□□□□ -0.44
RNASEH1-202ENST00000436842 PSPHP1O15172 72 aa12.29□□□□□ -0.44
RNASEH1-202ENST00000436842 LINC00313P59037 77 aa12.28□□□□□ -0.44
RNASEH1-202ENST00000436842 V9GYY9 64 aa12.27□□□□□ -0.45
RNASEH1-202ENST00000436842 LOC101927531A0A1B0GV80 90 aa12.25□□□□□ -0.45
RNASEH1-202ENST00000436842 SMR3BP02814 79 aaPredicted RBP12.25□□□□□ -0.45
RNASEH1-202ENST00000436842 C4orf48Q5BLP8 95 aa12.24□□□□□ -0.45
RNASEH1-202ENST00000436842 APOBP04114 4563 aaKnown RBP12.24□□□□□ -0.45
RNASEH1-202ENST00000436842 A8MUN3 132 aa12.23□□□□□ -0.45
RNASEH1-202ENST00000436842 SPINK1P00995 79 aa12.22□□□□□ -0.45
RNASEH1-202ENST00000436842 PRR26Q8N8Z3 221 aa12.19□□□□□ -0.46
RNASEH1-202ENST00000436842 Q5VV11 94 aa12.18□□□□□ -0.46
RNASEH1-202ENST00000436842 KRTAP16-1A8MUX0 517 aa12.17□□□□□ -0.46
RNASEH1-202ENST00000436842 HRES1P13985 223 aa12.17□□□□□ -0.46
RNASEH1-202ENST00000436842 FAT1Q14517 4588 aa12.16□□□□□ -0.46
RNASEH1-202ENST00000436842 KRTAP10-4P60372 401 aaPredicted RBP12.14□□□□□ -0.47
RNASEH1-202ENST00000436842 LINC00304Q8N9R0 145 aa12.13□□□□□ -0.47
RNASEH1-202ENST00000436842 RYR3Q15413 4870 aa12.11□□□□□ -0.47
RNASEH1-202ENST00000436842 FAM229AH3BQW9 127 aa12.11□□□□□ -0.47
RNASEH1-202ENST00000436842 RPS29P62273 56 aaKnown RBP12.1□□□□□ -0.47
RNASEH1-202ENST00000436842 PRR15LQ9BU68 103 aa12.08□□□□□ -0.48
RNASEH1-202ENST00000436842 SPAG11AQ6PDA7 123 aa12.07□□□□□ -0.48
RNASEH1-202ENST00000436842 RETNLBQ9BQ08 111 aa12.06□□□□□ -0.48
RNASEH1-202ENST00000436842 PKHD1L1Q86WI1 4243 aa12.04□□□□□ -0.48
RNASEH1-202ENST00000436842 IGKV2-30P06310 120 aa12.03□□□□□ -0.48
RNASEH1-202ENST00000436842 LINC01558Q9Y6Z2 57 aa12.02□□□□□ -0.48
RNASEH1-202ENST00000436842 Q75L30 129 aa12.01□□□□□ -0.49
RNASEH1-202ENST00000436842 CHKB-CPT1BH3BT56 60 aa12□□□□□ -0.49
RNASEH1-202ENST00000436842 A8MU10 97 aa11.98□□□□□ -0.49
RNASEH1-202ENST00000436842 DMAC1Q96GE9 116 aa11.98□□□□□ -0.49
RNASEH1-202ENST00000436842 ACYP2P14621 99 aa11.95□□□□□ -0.5
RNASEH1-202ENST00000436842 LCA10Q71F78 164 aa11.86□□□□□ -0.51
RNASEH1-202ENST00000436842 IGKV2D-30A0A075B6S6 120 aa11.85□□□□□ -0.51
RNASEH1-202ENST00000436842 A6NED7 52 aa11.83□□□□□ -0.52
RNASEH1-202ENST00000436842 HSPG2P98160 4391 aa11.8□□□□□ -0.52
RNASEH1-202ENST00000436842 C9orf92A6NGG3 77 aa11.78□□□□□ -0.52
RNASEH1-202ENST00000436842 SPINK7P58062 85 aa11.75□□□□□ -0.53
RNASEH1-202ENST00000436842 CDC42SE1Q9NRR8 79 aa11.74□□□□□ -0.53
RNASEH1-202ENST00000436842 C20orf166-AS1Q96NR2 134 aa11.74□□□□□ -0.53
RNASEH1-202ENST00000436842 A8MUU9 505 aa11.72□□□□□ -0.53
RNASEH1-202ENST00000436842 Q5VSD8 79 aa11.72□□□□□ -0.53
RNASEH1-202ENST00000436842 TNXBP22105 4242 aa11.72□□□□□ -0.53
RNASEH1-202ENST00000436842 C7orf65Q6ZTY9 151 aa11.71□□□□□ -0.53
RNASEH1-202ENST00000436842 LRP1Q07954 4544 aaKnown RBP11.71□□□□□ -0.54
RNASEH1-202ENST00000436842 FLG2Q5D862 2391 aaPredicted RBP11.69□□□□□ -0.54
RNASEH1-202ENST00000436842 RYR1P21817 5038 aa11.69□□□□□ -0.54
RNASEH1-202ENST00000436842 Q8N1X5 172 aa11.68□□□□□ -0.54
RNASEH1-202ENST00000436842 EPPK1P58107 5090 aaKnown RBP11.68□□□□□ -0.54
RNASEH1-202ENST00000436842 ATP11AUNQ6ZP68 121 aa11.68□□□□□ -0.54
RNASEH1-202ENST00000436842 KRTAP10-8P60410 259 aa11.65□□□□□ -0.54
RNASEH1-202ENST00000436842 PMAIP1Q13794 54 aa11.65□□□□□ -0.55
RNASEH1-202ENST00000436842 FAT3Q8TDW7 4589 aa11.63□□□□□ -0.55
RNASEH1-202ENST00000436842 SPTSSBQ8NFR3 76 aa11.63□□□□□ -0.55
RNASEH1-202ENST00000436842 KIAA1109Q2LD37 5005 aa11.61□□□□□ -0.55
RNASEH1-202ENST00000436842 KRTAP17-1Q9BYP8 105 aa11.58□□□□□ -0.56
RNASEH1-202ENST00000436842 A0A1B0GU69 56 aa11.57□□□□□ -0.56
RNASEH1-202ENST00000436842 A6NN06 94 aa11.52□□□□□ -0.57
RNASEH1-202ENST00000436842 KRTAP3-1Q9BYR8 98 aa11.43□□□□□ -0.58
RNASEH1-202ENST00000436842 SPATA8Q6RVD6 105 aa11.41□□□□□ -0.58
RNASEH1-202ENST00000436842 MYCBP2O75592 4640 aa11.4□□□□□ -0.58
RNASEH1-202ENST00000436842 MT1HL1P0DM35 61 aa11.38□□□□□ -0.59
RNASEH1-202ENST00000436842 KTN1-AS1Q86SY8 53 aa11.38□□□□□ -0.59
RNASEH1-202ENST00000436842 DMBT1Q9UGM3 2413 aaPredicted RBP11.36□□□□□ -0.59
RNASEH1-202ENST00000436842 UQCR11O14957 56 aa11.35□□□□□ -0.59
RNASEH1-202ENST00000436842 RPL37P61927 97 aaKnown RBP11.3□□□□□ -0.6
RNASEH1-202ENST00000436842 MIR22HGQ0VDD5 57 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms