RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 PRR4Q16378 134 aa6.35□□□□□ -1.39
HMGCL-204ENST00000436439 MUC2Q02817 5179 aa6.34□□□□□ -1.39
HMGCL-204ENST00000436439 A0A0G2JQZ4 141 aa6.33□□□□□ -1.4
HMGCL-204ENST00000436439 A0A087WSZ3 146 aa6.32□□□□□ -1.4
HMGCL-204ENST00000436439 Q8N9L7 120 aa6.32□□□□□ -1.4
HMGCL-204ENST00000436439 TYMSOSQ8TAI1 123 aa6.32□□□□□ -1.4
HMGCL-204ENST00000436439 DSCR10P59022 87 aa6.31□□□□□ -1.4
HMGCL-204ENST00000436439 K7EQZ3 153 aa6.28□□□□□ -1.4
HMGCL-204ENST00000436439 RPS29P62273 56 aaKnown RBP6.28□□□□□ -1.4
HMGCL-204ENST00000436439 Q5XG85 94 aa6.28□□□□□ -1.4
HMGCL-204ENST00000436439 SPAG11AQ6PDA7 123 aa6.28□□□□□ -1.4
HMGCL-204ENST00000436439 SS18L2Q9UHA2 77 aa6.28□□□□□ -1.4
HMGCL-204ENST00000436439 J3KT08 172 aa6.27□□□□□ -1.41
HMGCL-204ENST00000436439 SPINK1P00995 79 aa6.27□□□□□ -1.41
HMGCL-204ENST00000436439 LINC00472Q9H8W2 130 aa6.26□□□□□ -1.41
HMGCL-204ENST00000436439 ASB16-AS1Q495Z4 193 aa6.25□□□□□ -1.41
HMGCL-204ENST00000436439 C4orf48Q5BLP8 95 aa6.25□□□□□ -1.41
HMGCL-204ENST00000436439 HRCT1Q6UXD1 115 aa6.25□□□□□ -1.41
HMGCL-204ENST00000436439 C20orf197Q8N268 126 aa6.25□□□□□ -1.41
HMGCL-204ENST00000436439 LINC00304Q8N9R0 145 aa6.25□□□□□ -1.41
HMGCL-204ENST00000436439 OCR1Q9BZK8 76 aa6.25□□□□□ -1.41
HMGCL-204ENST00000436439 A8MWP4 228 aa6.24□□□□□ -1.41
HMGCL-204ENST00000436439 HCG22E2RYF7 251 aa6.24□□□□□ -1.41
HMGCL-204ENST00000436439 TMEM258P61165 79 aa6.24□□□□□ -1.41
HMGCL-204ENST00000436439 KLKP1Q107X0 134 aa6.24□□□□□ -1.41
HMGCL-204ENST00000436439 RETNLBQ9BQ08 111 aa6.24□□□□□ -1.41
HMGCL-204ENST00000436439 LIMD2Q9BT23 127 aa6.23□□□□□ -1.41
HMGCL-204ENST00000436439 DEFB116Q30KQ4 102 aa6.22□□□□□ -1.41
HMGCL-204ENST00000436439 PRR15Q8IV56 129 aa6.22□□□□□ -1.41
HMGCL-204ENST00000436439 CYSTM1Q9H1C7 97 aa6.22□□□□□ -1.41
HMGCL-204ENST00000436439 LCE2BO14633 110 aa6.2□□□□□ -1.42
HMGCL-204ENST00000436439 NDUFC1O43677 76 aa6.2□□□□□ -1.42
HMGCL-204ENST00000436439 Q96NJ1 140 aa6.2□□□□□ -1.42
HMGCL-204ENST00000436439 MUC17Q685J3 4493 aa6.2□□□□□ -1.42
HMGCL-204ENST00000436439 NDUFB1O75438 58 aa6.19□□□□□ -1.42
HMGCL-204ENST00000436439 TMEM254Q8TBM7 123 aa6.19□□□□□ -1.42
HMGCL-204ENST00000436439 LCE2AQ5TA79 106 aaPredicted RBP6.18□□□□□ -1.42
HMGCL-204ENST00000436439 A0A0U1RQV1 116 aa6.18□□□□□ -1.42
HMGCL-204ENST00000436439 FAT4Q6V0I7 4981 aa6.17□□□□□ -1.42
HMGCL-204ENST00000436439 H7BZZ5 65 aa6.17□□□□□ -1.42
HMGCL-204ENST00000436439 CASC2Q6XLA1 102 aa6.17□□□□□ -1.42
HMGCL-204ENST00000436439 KRTAP9-2Q9BYQ4 174 aa6.17□□□□□ -1.42
HMGCL-204ENST00000436439 TPRXLQ17RH7 258 aa6.16□□□□□ -1.42
HMGCL-204ENST00000436439 C5orf47Q569G3 176 aa6.16□□□□□ -1.42
HMGCL-204ENST00000436439 WFDC13Q8IUB5 93 aa6.16□□□□□ -1.42
HMGCL-204ENST00000436439 SNURFQ9Y675 71 aa6.16□□□□□ -1.42
HMGCL-204ENST00000436439 C1orf195Q5TG92 126 aa6.15□□□□□ -1.43
HMGCL-204ENST00000436439 IGLV7-46A0A075B6I9 117 aa6.14□□□□□ -1.43
HMGCL-204ENST00000436439 MMP24-AS1A0A0U1RRL7 71 aa6.14□□□□□ -1.43
HMGCL-204ENST00000436439 RPS28P62857 69 aaKnown RBP6.14□□□□□ -1.43
HMGCL-204ENST00000436439 FAM236DA0A1B0GTK5 79 aa6.13□□□□□ -1.43
HMGCL-204ENST00000436439 FAM236CP0DP71 79 aa6.13□□□□□ -1.43
HMGCL-204ENST00000436439 ATP5EP56381 51 aaPredicted RBP6.13□□□□□ -1.43
HMGCL-204ENST00000436439 A0A1B0GVX0 72 aa6.12□□□□□ -1.43
HMGCL-204ENST00000436439 hDV103S1A0JD37 113 aa6.11□□□□□ -1.43
HMGCL-204ENST00000436439 C8orf17Q9NRJ1 99 aa6.1□□□□□ -1.43
HMGCL-204ENST00000436439 H3BPC8 53 aa6.09□□□□□ -1.43
HMGCL-204ENST00000436439 MP68P56378 58 aa6.09□□□□□ -1.43
HMGCL-204ENST00000436439 ZCCHC13Q8WW36 166 aaKnown RBP6.09□□□□□ -1.43
HMGCL-204ENST00000436439 IGHV6-1A0A0B4J1U7 121 aa6.07□□□□□ -1.44
HMGCL-204ENST00000436439 SVIPQ8NHG7 77 aa6.07□□□□□ -1.44
HMGCL-204ENST00000436439 TP53AIP1Q9HCN2 124 aa6.07□□□□□ -1.44
HMGCL-204ENST00000436439 C8orf87E5RJ46 101 aa6.06□□□□□ -1.44
HMGCL-204ENST00000436439 FP248Q71RG6 208 aaPredicted RBP6.06□□□□□ -1.44
HMGCL-204ENST00000436439 SERP1Q9Y6X1 66 aa6.06□□□□□ -1.44
HMGCL-204ENST00000436439 H0Y9P7 68 aa6.05□□□□□ -1.44
HMGCL-204ENST00000436439 KRTAP13-3Q3SY46 172 aa6.05□□□□□ -1.44
HMGCL-204ENST00000436439 MRPL34Q9BQ48 92 aaKnown RBP6.04□□□□□ -1.44
HMGCL-204ENST00000436439 TRAV22A0A0B4J277 110 aa6.03□□□□□ -1.44
HMGCL-204ENST00000436439 KRTAP4-1Q9BYQ7 146 aa6.03□□□□□ -1.44
HMGCL-204ENST00000436439 LINC00313P59037 77 aa6.01□□□□□ -1.45
HMGCL-204ENST00000436439 LINC00208Q96KT6 92 aa6.01□□□□□ -1.45
HMGCL-204ENST00000436439 KRTAP9-6A0A140TA67 174 aa6□□□□□ -1.45
HMGCL-204ENST00000436439 NOTCH2NLQ7Z3S9 236 aa5.99□□□□□ -1.45
HMGCL-204ENST00000436439 NDUFS5O43920 106 aa5.98□□□□□ -1.45
HMGCL-204ENST00000436439 C1orf64Q8NEQ6 169 aa5.98□□□□□ -1.45
HMGCL-204ENST00000436439 KRTAP16-1A8MUX0 517 aa5.96□□□□□ -1.45
HMGCL-204ENST00000436439 SPANXA2-OT1Q8N9U9 137 aa5.96□□□□□ -1.45
HMGCL-204ENST00000436439 CYP4F30PQ9H0H9 118 aa5.96□□□□□ -1.45
HMGCL-204ENST00000436439 SEC61BP60468 96 aaKnown RBP5.93□□□□□ -1.46
HMGCL-204ENST00000436439 Q8N9P0 234 aaPredicted RBP5.93□□□□□ -1.46
HMGCL-204ENST00000436439 SMIM26A0A096LP01 95 aa5.92□□□□□ -1.46
HMGCL-204ENST00000436439 XP32Q5T750 250 aa5.92□□□□□ -1.46
HMGCL-204ENST00000436439 LOC101927531A0A1B0GV80 90 aa5.91□□□□□ -1.46
HMGCL-204ENST00000436439 C9orf92A6NGG3 77 aa5.9□□□□□ -1.47
HMGCL-204ENST00000436439 C20orf166-AS1Q96NR2 134 aa5.9□□□□□ -1.47
HMGCL-204ENST00000436439 LCE2CQ5TA81 110 aa5.89□□□□□ -1.47
HMGCL-204ENST00000436439 A8MUU9 505 aa5.88□□□□□ -1.47
HMGCL-204ENST00000436439 KRTAP19-2Q3LHN2 52 aa5.87□□□□□ -1.47
HMGCL-204ENST00000436439 Q75L30 129 aa5.87□□□□□ -1.47
HMGCL-204ENST00000436439 Q5W150 140 aa5.86□□□□□ -1.47
HMGCL-204ENST00000436439 PCOTHQ58A44 107 aa5.84□□□□□ -1.47
HMGCL-204ENST00000436439 RPL37P61927 97 aaKnown RBP5.81□□□□□ -1.48
HMGCL-204ENST00000436439 IGKV2-30P06310 120 aa5.8□□□□□ -1.48
HMGCL-204ENST00000436439 MT1HP80294 61 aa5.8□□□□□ -1.48
HMGCL-204ENST00000436439 CRCT1Q9UGL9 99 aa5.79□□□□□ -1.48
HMGCL-204ENST00000436439 C4orf26Q17RF5 130 aa5.78□□□□□ -1.48
HMGCL-204ENST00000436439 FSIP2Q5CZC0 6907 aa5.77□□□□□ -1.49
HMGCL-204ENST00000436439 Q1T7F1 81 aa5.76□□□□□ -1.49
HMGCL-204ENST00000436439 ATP11AUNQ6ZP68 121 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 274.3 ms