RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 KRTAP16-1A8MUX0 517 aa9.43□□□□□ -0.9
HMGN1-207ENST00000436324 BATFQ16520 125 aa9.39□□□□□ -0.91
HMGN1-207ENST00000436324 TRBV20-1A0A075B6N2 111 aa9.38□□□□□ -0.91
HMGN1-207ENST00000436324 FLGP20930 4061 aaPredicted RBP9.37□□□□□ -0.91
HMGN1-207ENST00000436324 A0A1B0GVX0 72 aa9.36□□□□□ -0.91
HMGN1-207ENST00000436324 TSTD3H0UI37 97 aa9.36□□□□□ -0.91
HMGN1-207ENST00000436324 Q6ZQT0 140 aa9.35□□□□□ -0.91
HMGN1-207ENST00000436324 C8orf87E5RJ46 101 aa9.34□□□□□ -0.91
HMGN1-207ENST00000436324 JMJD7-PLA2G4BH0Y9G9 81 aa9.34□□□□□ -0.91
HMGN1-207ENST00000436324 C21orf62-AS1Q17RA5 79 aa9.33□□□□□ -0.92
HMGN1-207ENST00000436324 J3KT08 172 aa9.32□□□□□ -0.92
HMGN1-207ENST00000436324 LYRM7Q5U5X0 104 aa9.32□□□□□ -0.92
HMGN1-207ENST00000436324 C14orf132Q9NPU4 83 aa9.31□□□□□ -0.92
HMGN1-207ENST00000436324 LOC110117498A0A087WWA1 95 aa9.3□□□□□ -0.92
HMGN1-207ENST00000436324 LOC105371267A0A1B0GV96 52 aa9.28□□□□□ -0.92
HMGN1-207ENST00000436324 FAM236DA0A1B0GTK5 79 aa9.27□□□□□ -0.93
HMGN1-207ENST00000436324 NDUFB1O75438 58 aa9.27□□□□□ -0.93
HMGN1-207ENST00000436324 FAM236CP0DP71 79 aa9.27□□□□□ -0.93
HMGN1-207ENST00000436324 PDE6GP18545 87 aa9.27□□□□□ -0.93
HMGN1-207ENST00000436324 CRCT1Q9UGL9 99 aa9.26□□□□□ -0.93
HMGN1-207ENST00000436324 A0A1B0GW54 56 aa9.23□□□□□ -0.93
HMGN1-207ENST00000436324 C9orf118A6NHY6 69 aa9.23□□□□□ -0.93
HMGN1-207ENST00000436324 HRES1P13985 223 aa9.23□□□□□ -0.93
HMGN1-207ENST00000436324 TAX1BP3O14907 124 aa9.22□□□□□ -0.93
HMGN1-207ENST00000436324 A8MWP4 228 aa9.21□□□□□ -0.94
HMGN1-207ENST00000436324 MTURNQ8N3F0 131 aa9.21□□□□□ -0.94
HMGN1-207ENST00000436324 ZCCHC13Q8WW36 166 aaKnown RBP9.21□□□□□ -0.94
HMGN1-207ENST00000436324 C8orf17Q9NRJ1 99 aa9.21□□□□□ -0.94
HMGN1-207ENST00000436324 RBM12B-AS1Q9P1G2 102 aa9.21□□□□□ -0.94
HMGN1-207ENST00000436324 FSIP2Q5CZC0 6907 aa9.2□□□□□ -0.94
HMGN1-207ENST00000436324 IGKV3D-7A0A0C4DH55 119 aa9.2□□□□□ -0.94
HMGN1-207ENST00000436324 NREPQ16612 68 aa9.2□□□□□ -0.94
HMGN1-207ENST00000436324 A0A1W2PPM0 123 aa9.19□□□□□ -0.94
HMGN1-207ENST00000436324 MPLKIPQ8TAP9 179 aa9.18□□□□□ -0.94
HMGN1-207ENST00000436324 H3BT86 120 aa9.16□□□□□ -0.94
HMGN1-207ENST00000436324 Q8N9P0 234 aaPredicted RBP9.16□□□□□ -0.94
HMGN1-207ENST00000436324 PRR15Q8IV56 129 aa9.14□□□□□ -0.95
HMGN1-207ENST00000436324 SPINK7P58062 85 aa9.13□□□□□ -0.95
HMGN1-207ENST00000436324 Q6ZVQ6 151 aa9.13□□□□□ -0.95
HMGN1-207ENST00000436324 KRTAP9-8Q9BYQ0 159 aa9.12□□□□□ -0.95
HMGN1-207ENST00000436324 KRTAP4-8Q9BYQ9 185 aa9.11□□□□□ -0.95
HMGN1-207ENST00000436324 SPCS1Q9Y6A9 102 aa9.08□□□□□ -0.96
HMGN1-207ENST00000436324 MMP24-AS1A0A0U1RRL7 71 aa9.07□□□□□ -0.96
HMGN1-207ENST00000436324 K7EQZ3 153 aa9.05□□□□□ -0.96
HMGN1-207ENST00000436324 MRPL34Q9BQ48 92 aaKnown RBP9.05□□□□□ -0.96
HMGN1-207ENST00000436324 TMEM254Q8TBM7 123 aa9.04□□□□□ -0.96
HMGN1-207ENST00000436324 hDV103S1A0JD37 113 aa9.02□□□□□ -0.97
HMGN1-207ENST00000436324 BPY2O14599 106 aa9.02□□□□□ -0.97
HMGN1-207ENST00000436324 NDUFS5O43920 106 aa9.02□□□□□ -0.97
HMGN1-207ENST00000436324 MT2AP02795 61 aa9.01□□□□□ -0.97
HMGN1-207ENST00000436324 WFDC13Q8IUB5 93 aa9.01□□□□□ -0.97
HMGN1-207ENST00000436324 COL5A1-AS1Q5SY13 56 aa8.98□□□□□ -0.97
HMGN1-207ENST00000436324 Q8N9L7 120 aa8.96□□□□□ -0.98
HMGN1-207ENST00000436324 MT1FP04733 61 aa8.94□□□□□ -0.98
HMGN1-207ENST00000436324 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.93□□□□□ -0.98
HMGN1-207ENST00000436324 KRTAP10-10P60014 251 aa8.93□□□□□ -0.98
HMGN1-207ENST00000436324 PRO0461Q9UI25 63 aa8.92□□□□□ -0.98
HMGN1-207ENST00000436324 K7EP34 96 aa8.91□□□□□ -0.98
HMGN1-207ENST00000436324 CASC2Q6XLA1 102 aa8.89□□□□□ -0.99
HMGN1-207ENST00000436324 IGKV2D-30A0A075B6S6 120 aa8.88□□□□□ -0.99
HMGN1-207ENST00000436324 IGKV2-30P06310 120 aa8.88□□□□□ -0.99
HMGN1-207ENST00000436324 Q5W150 140 aa8.88□□□□□ -0.99
HMGN1-207ENST00000436324 LINC00846Q9NV44 126 aa8.87□□□□□ -0.99
HMGN1-207ENST00000436324 HCG22E2RYF7 251 aa8.86□□□□□ -0.99
HMGN1-207ENST00000436324 UBL5Q9BZL1 73 aa8.85□□□□□ -0.99
HMGN1-207ENST00000436324 KRTAP9-3Q9BYQ3 159 aa8.84□□□□□ -0.99
HMGN1-207ENST00000436324 PCP4L1A6NKN8 68 aa8.83□□□□□ -1
HMGN1-207ENST00000436324 C7orf65Q6ZTY9 151 aa8.81□□□□□ -1
HMGN1-207ENST00000436324 USH2AO75445 5202 aa8.81□□□□□ -1
HMGN1-207ENST00000436324 H1FX-AS1Q4G0G2 97 aa8.8□□□□□ -1
HMGN1-207ENST00000436324 GTF2H5Q6ZYL4 71 aa8.79□□□□□ -1
HMGN1-207ENST00000436324 KRTAP4-12Q9BQ66 201 aa8.79□□□□□ -1
HMGN1-207ENST00000436324 CXCL6P80162 114 aa8.76□□□□□ -1.01
HMGN1-207ENST00000436324 F8W1H4 67 aa8.72□□□□□ -1.01
HMGN1-207ENST00000436324 ETDBQ3ZM63 59 aa8.72□□□□□ -1.01
HMGN1-207ENST00000436324 KRTAP19-1Q8IUB9 90 aa8.72□□□□□ -1.01
HMGN1-207ENST00000436324 C4orf26Q17RF5 130 aa8.71□□□□□ -1.02
HMGN1-207ENST00000436324 LCE3BQ5TA77 95 aa8.7□□□□□ -1.02
HMGN1-207ENST00000436324 SSPOA2VEC9 5147 aa8.7□□□□□ -1.02
HMGN1-207ENST00000436324 TP53AIP1Q9HCN2 124 aa8.58□□□□□ -1.04
HMGN1-207ENST00000436324 KRTAP3-1Q9BYR8 98 aa8.56□□□□□ -1.04
HMGN1-207ENST00000436324 C5orf47Q569G3 176 aa8.55□□□□□ -1.04
HMGN1-207ENST00000436324 C1orf64Q8NEQ6 169 aa8.55□□□□□ -1.04
HMGN1-207ENST00000436324 FCGBPQ9Y6R7 5405 aaPredicted RBP8.52□□□□□ -1.05
HMGN1-207ENST00000436324 KRTAP9-9Q9BYP9 154 aa8.51□□□□□ -1.05
HMGN1-207ENST00000436324 KRTAP9-4Q9BYQ2 154 aa8.51□□□□□ -1.05
HMGN1-207ENST00000436324 S4R3F8 94 aa8.51□□□□□ -1.05
HMGN1-207ENST00000436324 KRTAP9-7A8MTY7 169 aa8.5□□□□□ -1.05
HMGN1-207ENST00000436324 ACYP1P07311 99 aa8.49□□□□□ -1.05
HMGN1-207ENST00000436324 H3BS24 57 aa8.47□□□□□ -1.05
HMGN1-207ENST00000436324 KRTAP19-6Q3LI70 58 aa8.46□□□□□ -1.06
HMGN1-207ENST00000436324 FAM236AA0A1B0GUQ0 79 aa8.44□□□□□ -1.06
HMGN1-207ENST00000436324 FAM236BA0A1B0GV22 79 aa8.44□□□□□ -1.06
HMGN1-207ENST00000436324 LCA10Q71F78 164 aa8.44□□□□□ -1.06
HMGN1-207ENST00000436324 CYP4F30PQ9H0H9 118 aa8.44□□□□□ -1.06
HMGN1-207ENST00000436324 FAM240AA0A1B0GVK7 77 aa8.43□□□□□ -1.06
HMGN1-207ENST00000436324 HIST1H4AP62805 103 aaKnown RBP8.43□□□□□ -1.06
HMGN1-207ENST00000436324 CSAG1Q6PB30 78 aa8.43□□□□□ -1.06
HMGN1-207ENST00000436324 TRAV22A0A0B4J277 110 aa8.41□□□□□ -1.06
HMGN1-207ENST00000436324 ATP5EP2Q5VTU8 51 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms