RNA–Protein interactions for RNA: ENST00000436140.2

LINC01516-201, Transcript of long intergenic non-protein coding RNA 1516, humanhuman

TSL 5 BASIC

Gene LINC01516, Length 2,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01516-201ENST00000436140 A8MWP4 228 aa6.31□□□□□ -1.4
LINC01516-201ENST00000436140 CASC2Q6XLA1 102 aa6.31□□□□□ -1.4
LINC01516-201ENST00000436140 RETNLBQ9BQ08 111 aa6.31□□□□□ -1.4
LINC01516-201ENST00000436140 MYCBP2O75592 4640 aa6.3□□□□□ -1.4
LINC01516-201ENST00000436140 TMEM258P61165 79 aa6.3□□□□□ -1.4
LINC01516-201ENST00000436140 FAM229AH3BQW9 127 aa6.29□□□□□ -1.4
LINC01516-201ENST00000436140 Q5VSD8 79 aa6.29□□□□□ -1.4
LINC01516-201ENST00000436140 PRO0628Q9UI54 55 aa6.28□□□□□ -1.4
LINC01516-201ENST00000436140 HSPG2P98160 4391 aa6.27□□□□□ -1.41
LINC01516-201ENST00000436140 TRAV7A0A075B6U4 112 aa6.27□□□□□ -1.41
LINC01516-201ENST00000436140 KRTAP10-4P60372 401 aaPredicted RBP6.27□□□□□ -1.41
LINC01516-201ENST00000436140 hDV103S1A0JD37 113 aa6.26□□□□□ -1.41
LINC01516-201ENST00000436140 OCR1Q9BZK8 76 aa6.26□□□□□ -1.41
LINC01516-201ENST00000436140 RYR1P21817 5038 aa6.25□□□□□ -1.41
LINC01516-201ENST00000436140 C1orf195Q5TG92 126 aa6.25□□□□□ -1.41
LINC01516-201ENST00000436140 LINC00304Q8N9R0 145 aa6.25□□□□□ -1.41
LINC01516-201ENST00000436140 PRR4Q16378 134 aa6.24□□□□□ -1.41
LINC01516-201ENST00000436140 MMP24-AS1A0A0U1RRL7 71 aa6.24□□□□□ -1.41
LINC01516-201ENST00000436140 A0A1B0GVX0 72 aa6.24□□□□□ -1.41
LINC01516-201ENST00000436140 FAM229BQ4G0N7 80 aa6.24□□□□□ -1.41
LINC01516-201ENST00000436140 C8orf17Q9NRJ1 99 aa6.24□□□□□ -1.41
LINC01516-201ENST00000436140 SEC61GP60059 68 aa6.23□□□□□ -1.41
LINC01516-201ENST00000436140 TMEM254Q8TBM7 123 aa6.23□□□□□ -1.41
LINC01516-201ENST00000436140 LINC00208Q96KT6 92 aa6.21□□□□□ -1.42
LINC01516-201ENST00000436140 C9orf92A6NGG3 77 aa6.21□□□□□ -1.42
LINC01516-201ENST00000436140 KRTAP29-1A8MX34 341 aaPredicted RBP6.21□□□□□ -1.42
LINC01516-201ENST00000436140 Q8N1X5 172 aa6.18□□□□□ -1.42
LINC01516-201ENST00000436140 CD164Q04900 197 aa6.18□□□□□ -1.42
LINC01516-201ENST00000436140 KRTAP4-5Q9BYR2 181 aa6.18□□□□□ -1.42
LINC01516-201ENST00000436140 ABCA13Q86UQ4 5058 aa6.17□□□□□ -1.42
LINC01516-201ENST00000436140 LINC00313P59037 77 aa6.17□□□□□ -1.42
LINC01516-201ENST00000436140 PCLOQ9Y6V0 5065 aa6.17□□□□□ -1.42
LINC01516-201ENST00000436140 SPINK1P00995 79 aa6.16□□□□□ -1.42
LINC01516-201ENST00000436140 FP248Q71RG6 208 aaPredicted RBP6.16□□□□□ -1.42
LINC01516-201ENST00000436140 H0Y9P7 68 aa6.16□□□□□ -1.42
LINC01516-201ENST00000436140 FAM236DA0A1B0GTK5 79 aa6.15□□□□□ -1.42
LINC01516-201ENST00000436140 FAM236CP0DP71 79 aa6.15□□□□□ -1.42
LINC01516-201ENST00000436140 PCOTHQ58A44 107 aa6.15□□□□□ -1.42
LINC01516-201ENST00000436140 LIMD2Q9BT23 127 aa6.15□□□□□ -1.42
LINC01516-201ENST00000436140 FAT3Q8TDW7 4589 aa6.15□□□□□ -1.42
LINC01516-201ENST00000436140 MRPL34Q9BQ48 92 aaKnown RBP6.15□□□□□ -1.42
LINC01516-201ENST00000436140 PKHD1L1Q86WI1 4243 aa6.14□□□□□ -1.43
LINC01516-201ENST00000436140 H7BZZ5 65 aa6.14□□□□□ -1.43
LINC01516-201ENST00000436140 Q5W150 140 aa6.13□□□□□ -1.43
LINC01516-201ENST00000436140 V9GYY9 64 aa6.13□□□□□ -1.43
LINC01516-201ENST00000436140 MP68P56378 58 aa6.13□□□□□ -1.43
LINC01516-201ENST00000436140 A0A0U1RQV1 116 aa6.12□□□□□ -1.43
LINC01516-201ENST00000436140 C1orf64Q8NEQ6 169 aa6.12□□□□□ -1.43
LINC01516-201ENST00000436140 SERP1Q9Y6X1 66 aa6.11□□□□□ -1.43
LINC01516-201ENST00000436140 KLKP1Q107X0 134 aa6.1□□□□□ -1.43
LINC01516-201ENST00000436140 TRAV22A0A0B4J277 110 aa6.09□□□□□ -1.44
LINC01516-201ENST00000436140 BIRC6Q9NR09 4857 aa6.08□□□□□ -1.44
LINC01516-201ENST00000436140 HERC2O95714 4834 aa6.07□□□□□ -1.44
LINC01516-201ENST00000436140 SPAG11AQ6PDA7 123 aa6.07□□□□□ -1.44
LINC01516-201ENST00000436140 ASB16-AS1Q495Z4 193 aa6.05□□□□□ -1.44
LINC01516-201ENST00000436140 SMIM26A0A096LP01 95 aa6.05□□□□□ -1.44
LINC01516-201ENST00000436140 HERC1Q15751 4861 aa6.05□□□□□ -1.44
LINC01516-201ENST00000436140 IGKV2D-30A0A075B6S6 120 aa6.04□□□□□ -1.44
LINC01516-201ENST00000436140 IGKV2-30P06310 120 aa6.04□□□□□ -1.44
LINC01516-201ENST00000436140 KRTAP10-8P60410 259 aa6.03□□□□□ -1.44
LINC01516-201ENST00000436140 Q8N9P0 234 aaPredicted RBP6.03□□□□□ -1.44
LINC01516-201ENST00000436140 BRK1Q8WUW1 75 aa6.03□□□□□ -1.44
LINC01516-201ENST00000436140 TNXBP22105 4242 aa6.03□□□□□ -1.44
LINC01516-201ENST00000436140 C8orf87E5RJ46 101 aa6.02□□□□□ -1.45
LINC01516-201ENST00000436140 KRTAP16-1A8MUX0 517 aa6□□□□□ -1.45
LINC01516-201ENST00000436140 ZCCHC13Q8WW36 166 aaKnown RBP6□□□□□ -1.45
LINC01516-201ENST00000436140 TP53AIP1Q9HCN2 124 aa6□□□□□ -1.45
LINC01516-201ENST00000436140 MT1HL1P0DM35 61 aa5.98□□□□□ -1.45
LINC01516-201ENST00000436140 NDUFC1O43677 76 aa5.97□□□□□ -1.45
LINC01516-201ENST00000436140 IGLV7-46A0A075B6I9 117 aa5.96□□□□□ -1.46
LINC01516-201ENST00000436140 LPAP08519 4548 aa5.95□□□□□ -1.46
LINC01516-201ENST00000436140 PMAIP1Q13794 54 aa5.93□□□□□ -1.46
LINC01516-201ENST00000436140 CYP4F30PQ9H0H9 118 aa5.93□□□□□ -1.46
LINC01516-201ENST00000436140 MPLKIPQ8TAP9 179 aa5.93□□□□□ -1.46
LINC01516-201ENST00000436140 RPS29P62273 56 aaKnown RBP5.92□□□□□ -1.46
LINC01516-201ENST00000436140 J3QL48 77 aa5.91□□□□□ -1.46
LINC01516-201ENST00000436140 LRP2P98164 4655 aa5.91□□□□□ -1.46
LINC01516-201ENST00000436140 KRTAP13-3Q3SY46 172 aa5.91□□□□□ -1.46
LINC01516-201ENST00000436140 HRES1P13985 223 aa5.89□□□□□ -1.47
LINC01516-201ENST00000436140 LOC101927531A0A1B0GV80 90 aa5.88□□□□□ -1.47
LINC01516-201ENST00000436140 H3BPC8 53 aa5.88□□□□□ -1.47
LINC01516-201ENST00000436140 ATP5EP56381 51 aaPredicted RBP5.87□□□□□ -1.47
LINC01516-201ENST00000436140 MUC2Q02817 5179 aa5.85□□□□□ -1.47
LINC01516-201ENST00000436140 SPINK7P58062 85 aa5.83□□□□□ -1.48
LINC01516-201ENST00000436140 ATP11AUNQ6ZP68 121 aa5.82□□□□□ -1.48
LINC01516-201ENST00000436140 A8MUU9 505 aa5.82□□□□□ -1.48
LINC01516-201ENST00000436140 XP32Q5T750 250 aa5.82□□□□□ -1.48
LINC01516-201ENST00000436140 C20orf166-AS1Q96NR2 134 aa5.82□□□□□ -1.48
LINC01516-201ENST00000436140 COA5Q86WW8 74 aa5.81□□□□□ -1.48
LINC01516-201ENST00000436140 C7orf65Q6ZTY9 151 aa5.8□□□□□ -1.48
LINC01516-201ENST00000436140 A8MU10 97 aa5.79□□□□□ -1.48
LINC01516-201ENST00000436140 Q1T7F1 81 aa5.79□□□□□ -1.48
LINC01516-201ENST00000436140 RNF213Q63HN8 5207 aa5.79□□□□□ -1.48
LINC01516-201ENST00000436140 PSPHP1O15172 72 aa5.78□□□□□ -1.48
LINC01516-201ENST00000436140 SPANXA2-OT1Q8N9U9 137 aa5.78□□□□□ -1.48
LINC01516-201ENST00000436140 UBR4Q5T4S7 5183 aa5.77□□□□□ -1.49
LINC01516-201ENST00000436140 CHKB-CPT1BH3BT56 60 aa5.76□□□□□ -1.49
LINC01516-201ENST00000436140 RBM12B-AS1Q9P1G2 102 aa5.75□□□□□ -1.49
LINC01516-201ENST00000436140 Q75L30 129 aa5.75□□□□□ -1.49
LINC01516-201ENST00000436140 RPL37P61927 97 aaKnown RBP5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms