RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 SPRR1BP22528 89 aa3.49□□□□□ -1.85
VRK2-206ENST00000435505 A0A1B0GU33 70 aa3.49□□□□□ -1.85
VRK2-206ENST00000435505 VWFP04275 2813 aa3.49□□□□□ -1.85
VRK2-206ENST00000435505 HIVEP2P31629 2446 aa3.49□□□□□ -1.85
VRK2-206ENST00000435505 ZNF469Q96JG9 3925 aaPredicted RBP3.48□□□□□ -1.85
VRK2-206ENST00000435505 LINC01556Q5JQF7 62 aa3.48□□□□□ -1.85
VRK2-206ENST00000435505 KRTAP11-1Q8IUC1 163 aa3.48□□□□□ -1.85
VRK2-206ENST00000435505 FBN1P35555 2871 aaKnown RBP3.47□□□□□ -1.85
VRK2-206ENST00000435505 FLNCQ14315 2725 aa3.47□□□□□ -1.85
VRK2-206ENST00000435505 LINC00304Q8N9R0 145 aa3.47□□□□□ -1.85
VRK2-206ENST00000435505 TTC28Q96AY4 2481 aa3.47□□□□□ -1.85
VRK2-206ENST00000435505 DEFB123Q8N688 67 aa3.46□□□□□ -1.85
VRK2-206ENST00000435505 CRIPTQ9P021 101 aa3.46□□□□□ -1.85
VRK2-206ENST00000435505 C20orf166-AS1Q96NR2 134 aa3.46□□□□□ -1.86
VRK2-206ENST00000435505 CCDC168Q8NDH2 2452 aa3.46□□□□□ -1.86
VRK2-206ENST00000435505 ZNF462Q96JM2 2506 aa3.46□□□□□ -1.86
VRK2-206ENST00000435505 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
VRK2-206ENST00000435505 DOPEY1Q5JWR5 2465 aa3.45□□□□□ -1.86
VRK2-206ENST00000435505 H0YAA0 97 aa3.44□□□□□ -1.86
VRK2-206ENST00000435505 KRTAP19-1Q8IUB9 90 aa3.44□□□□□ -1.86
VRK2-206ENST00000435505 HECTD1Q9ULT8 2610 aa3.44□□□□□ -1.86
VRK2-206ENST00000435505 ACACBO00763 2458 aa3.44□□□□□ -1.86
VRK2-206ENST00000435505 R4GN34 69 aa3.43□□□□□ -1.86
VRK2-206ENST00000435505 PIEZO1Q92508 2521 aa3.42□□□□□ -1.86
VRK2-206ENST00000435505 DNAH10Q8IVF4 4471 aa3.42□□□□□ -1.86
VRK2-206ENST00000435505 H3BNG1 76 aa3.42□□□□□ -1.86
VRK2-206ENST00000435505 DEFB113Q30KQ7 82 aa3.42□□□□□ -1.86
VRK2-206ENST00000435505 ITPR3Q14573 2671 aa3.42□□□□□ -1.86
VRK2-206ENST00000435505 ABCA12Q86UK0 2595 aa3.41□□□□□ -1.86
VRK2-206ENST00000435505 COL7A1Q02388 2944 aa3.41□□□□□ -1.86
VRK2-206ENST00000435505 KRTAP10-3P60369 221 aa3.41□□□□□ -1.86
VRK2-206ENST00000435505 FLG2Q5D862 2391 aaPredicted RBP3.4□□□□□ -1.86
VRK2-206ENST00000435505 A0A087WTM6 91 aa3.4□□□□□ -1.87
VRK2-206ENST00000435505 SPINK6Q6UWN8 80 aa3.39□□□□□ -1.87
VRK2-206ENST00000435505 Q6ZSA8 131 aa3.39□□□□□ -1.87
VRK2-206ENST00000435505 KRTAP9-3Q9BYQ3 159 aa3.39□□□□□ -1.87
VRK2-206ENST00000435505 PSORS1C2Q9UIG4 136 aa3.39□□□□□ -1.87
VRK2-206ENST00000435505 LY6G6CO95867 125 aa3.39□□□□□ -1.87
VRK2-206ENST00000435505 SPINT4Q6UDR6 99 aa3.39□□□□□ -1.87
VRK2-206ENST00000435505 SSBP3-AS1Q7Z2R9 100 aa3.39□□□□□ -1.87
VRK2-206ENST00000435505 KMT2BQ9UMN6 2715 aaPredicted RBP3.38□□□□□ -1.87
VRK2-206ENST00000435505 PDZD2O15018 2839 aa3.38□□□□□ -1.87
VRK2-206ENST00000435505 ANK2Q01484 3957 aa3.38□□□□□ -1.87
VRK2-206ENST00000435505 LYSTQ99698 3801 aa3.38□□□□□ -1.87
VRK2-206ENST00000435505 TENM3Q9P273 2699 aa3.38□□□□□ -1.87
VRK2-206ENST00000435505 SPINK1P00995 79 aa3.38□□□□□ -1.87
VRK2-206ENST00000435505 KRTAP13-1Q8IUC0 172 aa3.38□□□□□ -1.87
VRK2-206ENST00000435505 HELZ2Q9BYK8 2649 aaKnown RBP3.37□□□□□ -1.87
VRK2-206ENST00000435505 FLNAP21333 2647 aaKnown RBP3.37□□□□□ -1.87
VRK2-206ENST00000435505 KRTAP10-9P60411 292 aa3.37□□□□□ -1.87
VRK2-206ENST00000435505 NUPR2A6NF83 97 aa3.36□□□□□ -1.87
VRK2-206ENST00000435505 MEGF8Q7Z7M0 2845 aa3.36□□□□□ -1.87
VRK2-206ENST00000435505 NBEAL1Q6ZS30 2694 aa3.36□□□□□ -1.87
VRK2-206ENST00000435505 KRTAP1-3Q8IUG1 177 aa3.35□□□□□ -1.87
VRK2-206ENST00000435505 FRAS1Q86XX4 4008 aa3.35□□□□□ -1.87
VRK2-206ENST00000435505 MYO18BQ8IUG5 2567 aa3.35□□□□□ -1.87
VRK2-206ENST00000435505 ANAPC11Q9NYG5 84 aa3.34□□□□□ -1.87
VRK2-206ENST00000435505 TENM4Q6N022 2769 aa3.33□□□□□ -1.88
VRK2-206ENST00000435505 TENM1Q9UKZ4 2725 aa3.33□□□□□ -1.88
VRK2-206ENST00000435505 FAM208BQ5VWN6 2430 aa3.33□□□□□ -1.88
VRK2-206ENST00000435505 TEP1Q99973 2627 aaKnown RBP3.32□□□□□ -1.88
VRK2-206ENST00000435505 TPRXLQ17RH7 258 aa3.31□□□□□ -1.88
VRK2-206ENST00000435505 DNAH8Q96JB1 4490 aa3.31□□□□□ -1.88
VRK2-206ENST00000435505 DNAH9Q9NYC9 4486 aa3.31□□□□□ -1.88
VRK2-206ENST00000435505 H1FX-AS1Q4G0G2 97 aa3.3□□□□□ -1.88
VRK2-206ENST00000435505 ACANP16112 2415 aa3.3□□□□□ -1.88
VRK2-206ENST00000435505 NOTCH2Q04721 2471 aa3.29□□□□□ -1.88
VRK2-206ENST00000435505 KRTAP1-1Q07627 177 aa3.29□□□□□ -1.88
VRK2-206ENST00000435505 KRTAP1-5Q9BYS1 174 aa3.29□□□□□ -1.88
VRK2-206ENST00000435505 C10orf95Q9H7T3 257 aa3.28□□□□□ -1.88
VRK2-206ENST00000435505 IGSF10Q6WRI0 2623 aa3.27□□□□□ -1.89
VRK2-206ENST00000435505 LCE1AQ5T7P2 110 aa3.27□□□□□ -1.89
VRK2-206ENST00000435505 CACNA1AO00555 2505 aa3.26□□□□□ -1.89
VRK2-206ENST00000435505 NOTCH1P46531 2555 aa3.26□□□□□ -1.89
VRK2-206ENST00000435505 DNAH17Q9UFH2 4485 aa3.25□□□□□ -1.89
VRK2-206ENST00000435505 ITPR2Q14571 2701 aa3.25□□□□□ -1.89
VRK2-206ENST00000435505 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
VRK2-206ENST00000435505 NBDYA0A0U1RRE5 68 aa3.24□□□□□ -1.89
VRK2-206ENST00000435505 FLNBO75369 2602 aaKnown RBP3.24□□□□□ -1.89
VRK2-206ENST00000435505 CMYA5Q8N3K9 4069 aa3.24□□□□□ -1.89
VRK2-206ENST00000435505 TGP01266 2768 aa3.23□□□□□ -1.89
VRK2-206ENST00000435505 PRO2289Q9P1D8 64 aa3.23□□□□□ -1.89
VRK2-206ENST00000435505 KRTAP10-11P60412 298 aa3.22□□□□□ -1.89
VRK2-206ENST00000435505 ATRQ13535 2644 aa3.22□□□□□ -1.89
VRK2-206ENST00000435505 FASNP49327 2511 aaKnown RBP3.22□□□□□ -1.89
VRK2-206ENST00000435505 COX6B2Q6YFQ2 88 aa3.22□□□□□ -1.89
VRK2-206ENST00000435505 MAST4O15021 2626 aa3.21□□□□□ -1.9
VRK2-206ENST00000435505 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.9
VRK2-206ENST00000435505 SPACA4Q8TDM5 124 aa3.21□□□□□ -1.9
VRK2-206ENST00000435505 USP24Q9UPU5 2620 aa3.19□□□□□ -1.9
VRK2-206ENST00000435505 KRTAP1-4P0C5Y4 121 aa3.19□□□□□ -1.9
VRK2-206ENST00000435505 SMR3AQ99954 134 aa3.19□□□□□ -1.9
VRK2-206ENST00000435505 DNAH3Q8TD57 4116 aa3.18□□□□□ -1.9
VRK2-206ENST00000435505 DNAH7Q8WXX0 4024 aa3.17□□□□□ -1.9
VRK2-206ENST00000435505 RPL37P61927 97 aaKnown RBP3.17□□□□□ -1.9
VRK2-206ENST00000435505 NSD1Q96L73 2696 aaPredicted RBP3.16□□□□□ -1.9
VRK2-206ENST00000435505 HUWE1Q7Z6Z7 4374 aaKnown RBP3.16□□□□□ -1.9
VRK2-206ENST00000435505 STAB2Q8WWQ8 2551 aa3.16□□□□□ -1.9
VRK2-206ENST00000435505 A0A0D9SG42 100 aa3.16□□□□□ -1.9
VRK2-206ENST00000435505 VPS13DQ5THJ4 4388 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms