RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 C14orf132Q9NPU4 83 aa8.5□□□□□ -1.05
SMPD4-207ENST00000435455 A0A1B0GVX0 72 aa8.49□□□□□ -1.05
SMPD4-207ENST00000435455 H3BT86 120 aa8.49□□□□□ -1.05
SMPD4-207ENST00000435455 KRTAP16-1A8MUX0 517 aa8.48□□□□□ -1.05
SMPD4-207ENST00000435455 C8orf87E5RJ46 101 aa8.48□□□□□ -1.05
SMPD4-207ENST00000435455 COX6B2Q6YFQ2 88 aa8.48□□□□□ -1.05
SMPD4-207ENST00000435455 NOTCH2NLQ7Z3S9 236 aa8.48□□□□□ -1.05
SMPD4-207ENST00000435455 MT1HP80294 61 aa8.45□□□□□ -1.06
SMPD4-207ENST00000435455 NDUFB1O75438 58 aa8.44□□□□□ -1.06
SMPD4-207ENST00000435455 COL5A1-AS1Q5SY13 56 aa8.42□□□□□ -1.06
SMPD4-207ENST00000435455 MTURNQ8N3F0 131 aa8.42□□□□□ -1.06
SMPD4-207ENST00000435455 SPCS1Q9Y6A9 102 aa8.41□□□□□ -1.06
SMPD4-207ENST00000435455 NREPQ16612 68 aa8.4□□□□□ -1.06
SMPD4-207ENST00000435455 A8MWP4 228 aa8.39□□□□□ -1.07
SMPD4-207ENST00000435455 KRTAP9-2Q9BYQ4 174 aa8.39□□□□□ -1.07
SMPD4-207ENST00000435455 FLGP20930 4061 aaPredicted RBP8.37□□□□□ -1.07
SMPD4-207ENST00000435455 C8orf17Q9NRJ1 99 aa8.35□□□□□ -1.07
SMPD4-207ENST00000435455 IGKV3D-7A0A0C4DH55 119 aa8.34□□□□□ -1.07
SMPD4-207ENST00000435455 M0R2T5 61 aa8.34□□□□□ -1.07
SMPD4-207ENST00000435455 PRR15Q8IV56 129 aa8.32□□□□□ -1.08
SMPD4-207ENST00000435455 Q8N9P0 234 aaPredicted RBP8.31□□□□□ -1.08
SMPD4-207ENST00000435455 SMCPP49901 116 aaPredicted RBP8.3□□□□□ -1.08
SMPD4-207ENST00000435455 ZCCHC13Q8WW36 166 aaKnown RBP8.3□□□□□ -1.08
SMPD4-207ENST00000435455 K7EP34 96 aa8.28□□□□□ -1.08
SMPD4-207ENST00000435455 KRTAP10-6P60371 365 aaPredicted RBP8.28□□□□□ -1.08
SMPD4-207ENST00000435455 Q6ZVQ6 151 aa8.28□□□□□ -1.08
SMPD4-207ENST00000435455 LORP23490 312 aaPredicted RBP8.26□□□□□ -1.09
SMPD4-207ENST00000435455 PRO0461Q9UI25 63 aa8.26□□□□□ -1.09
SMPD4-207ENST00000435455 PCP4L1A6NKN8 68 aa8.25□□□□□ -1.09
SMPD4-207ENST00000435455 BPY2O14599 106 aa8.25□□□□□ -1.09
SMPD4-207ENST00000435455 LCE2DQ5TA82 110 aaPredicted RBP8.25□□□□□ -1.09
SMPD4-207ENST00000435455 RBM12B-AS1Q9P1G2 102 aa8.25□□□□□ -1.09
SMPD4-207ENST00000435455 MMP24-AS1A0A0U1RRL7 71 aa8.24□□□□□ -1.09
SMPD4-207ENST00000435455 HRES1P13985 223 aa8.24□□□□□ -1.09
SMPD4-207ENST00000435455 FAM236DA0A1B0GTK5 79 aa8.23□□□□□ -1.09
SMPD4-207ENST00000435455 K7EQZ3 153 aa8.23□□□□□ -1.09
SMPD4-207ENST00000435455 FAM236CP0DP71 79 aa8.23□□□□□ -1.09
SMPD4-207ENST00000435455 GTF2H5Q6ZYL4 71 aa8.23□□□□□ -1.09
SMPD4-207ENST00000435455 TMEM254Q8TBM7 123 aa8.23□□□□□ -1.09
SMPD4-207ENST00000435455 MPLKIPQ8TAP9 179 aa8.22□□□□□ -1.09
SMPD4-207ENST00000435455 MRPL34Q9BQ48 92 aaKnown RBP8.21□□□□□ -1.1
SMPD4-207ENST00000435455 hDV103S1A0JD37 113 aa8.2□□□□□ -1.1
SMPD4-207ENST00000435455 SPINK7P58062 85 aa8.18□□□□□ -1.1
SMPD4-207ENST00000435455 UBL5Q9BZL1 73 aa8.17□□□□□ -1.1
SMPD4-207ENST00000435455 F8W1H4 67 aa8.16□□□□□ -1.1
SMPD4-207ENST00000435455 NDUFS5O43920 106 aa8.14□□□□□ -1.11
SMPD4-207ENST00000435455 LINC00846Q9NV44 126 aa8.14□□□□□ -1.11
SMPD4-207ENST00000435455 Q8N9L7 120 aa8.12□□□□□ -1.11
SMPD4-207ENST00000435455 CASC2Q6XLA1 102 aa8.1□□□□□ -1.11
SMPD4-207ENST00000435455 WFDC13Q8IUB5 93 aa8.1□□□□□ -1.11
SMPD4-207ENST00000435455 ETDBQ3ZM63 59 aa8.09□□□□□ -1.11
SMPD4-207ENST00000435455 KRTAP9-6A0A140TA67 174 aa8.07□□□□□ -1.12
SMPD4-207ENST00000435455 HCG22E2RYF7 251 aa8.03□□□□□ -1.12
SMPD4-207ENST00000435455 CXCL6P80162 114 aa8.01□□□□□ -1.13
SMPD4-207ENST00000435455 Q5W150 140 aa8.01□□□□□ -1.13
SMPD4-207ENST00000435455 KRTAP9-8Q9BYQ0 159 aa8.01□□□□□ -1.13
SMPD4-207ENST00000435455 IGKV2D-30A0A075B6S6 120 aa7.99□□□□□ -1.13
SMPD4-207ENST00000435455 IGKV2-30P06310 120 aa7.99□□□□□ -1.13
SMPD4-207ENST00000435455 C7orf65Q6ZTY9 151 aa7.99□□□□□ -1.13
SMPD4-207ENST00000435455 CRCT1Q9UGL9 99 aa7.97□□□□□ -1.13
SMPD4-207ENST00000435455 ACYP1P07311 99 aa7.94□□□□□ -1.14
SMPD4-207ENST00000435455 MT2AP02795 61 aa7.92□□□□□ -1.14
SMPD4-207ENST00000435455 H1FX-AS1Q4G0G2 97 aa7.91□□□□□ -1.14
SMPD4-207ENST00000435455 FAM240AA0A1B0GVK7 77 aa7.9□□□□□ -1.14
SMPD4-207ENST00000435455 TP53AIP1Q9HCN2 124 aa7.9□□□□□ -1.14
SMPD4-207ENST00000435455 FSIP2Q5CZC0 6907 aa7.85□□□□□ -1.15
SMPD4-207ENST00000435455 MT1FP04733 61 aa7.85□□□□□ -1.15
SMPD4-207ENST00000435455 KRTAP10-10P60014 251 aa7.85□□□□□ -1.15
SMPD4-207ENST00000435455 ATP5EP2Q5VTU8 51 aa7.85□□□□□ -1.15
SMPD4-207ENST00000435455 C4orf26Q17RF5 130 aa7.82□□□□□ -1.16
SMPD4-207ENST00000435455 A0A1B0GV90 55 aa7.79□□□□□ -1.16
SMPD4-207ENST00000435455 HIST1H4AP62805 103 aaKnown RBP7.76□□□□□ -1.17
SMPD4-207ENST00000435455 KRTAP9-3Q9BYQ3 159 aa7.76□□□□□ -1.17
SMPD4-207ENST00000435455 LINC00643Q86TS7 51 aa7.74□□□□□ -1.17
SMPD4-207ENST00000435455 TRAV22A0A0B4J277 110 aa7.73□□□□□ -1.17
SMPD4-207ENST00000435455 USH2AO75445 5202 aa7.72□□□□□ -1.17
SMPD4-207ENST00000435455 C1orf64Q8NEQ6 169 aa7.71□□□□□ -1.18
SMPD4-207ENST00000435455 LCE2BO14633 110 aa7.69□□□□□ -1.18
SMPD4-207ENST00000435455 KRTAP3-1Q9BYR8 98 aa7.69□□□□□ -1.18
SMPD4-207ENST00000435455 LOC101927531A0A1B0GV80 90 aa7.68□□□□□ -1.18
SMPD4-207ENST00000435455 CYP4F30PQ9H0H9 118 aa7.68□□□□□ -1.18
SMPD4-207ENST00000435455 UQCRQO14949 82 aa7.67□□□□□ -1.18
SMPD4-207ENST00000435455 J3QR89 54 aa7.65□□□□□ -1.18
SMPD4-207ENST00000435455 S4R3F8 94 aa7.65□□□□□ -1.18
SMPD4-207ENST00000435455 A0A087WVE0 104 aa7.64□□□□□ -1.19
SMPD4-207ENST00000435455 ATOX1O00244 68 aa7.64□□□□□ -1.19
SMPD4-207ENST00000435455 SSPOA2VEC9 5147 aa7.62□□□□□ -1.19
SMPD4-207ENST00000435455 H0Y9P7 68 aa7.62□□□□□ -1.19
SMPD4-207ENST00000435455 C5orf47Q569G3 176 aa7.62□□□□□ -1.19
SMPD4-207ENST00000435455 CSAG1Q6PB30 78 aa7.59□□□□□ -1.19
SMPD4-207ENST00000435455 LCA10Q71F78 164 aa7.58□□□□□ -1.2
SMPD4-207ENST00000435455 OCR1Q9BZK8 76 aa7.52□□□□□ -1.21
SMPD4-207ENST00000435455 FAM236AA0A1B0GUQ0 79 aa7.51□□□□□ -1.21
SMPD4-207ENST00000435455 FAM236BA0A1B0GV22 79 aa7.51□□□□□ -1.21
SMPD4-207ENST00000435455 KRTAP19-1Q8IUB9 90 aa7.51□□□□□ -1.21
SMPD4-207ENST00000435455 MP68P56378 58 aa7.5□□□□□ -1.21
SMPD4-207ENST00000435455 LINC00208Q96KT6 92 aa7.5□□□□□ -1.21
SMPD4-207ENST00000435455 FCGBPQ9Y6R7 5405 aaPredicted RBP7.47□□□□□ -1.21
SMPD4-207ENST00000435455 KRTAP3-3Q9BYR6 98 aa7.47□□□□□ -1.21
SMPD4-207ENST00000435455 A8MUN3 132 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms