RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 KRTAP10-2P60368 255 aa9.44□□□□□ -0.9
HLA-DQB2-231ENST00000435145 SSBP3-AS1Q7Z2R9 100 aa9.44□□□□□ -0.9
HLA-DQB2-231ENST00000435145 CIRBP-AS1Q8TBR5 109 aa9.44□□□□□ -0.9
HLA-DQB2-231ENST00000435145 BRK1Q8WUW1 75 aa9.42□□□□□ -0.9
HLA-DQB2-231ENST00000435145 V9GYY9 64 aa9.41□□□□□ -0.9
HLA-DQB2-231ENST00000435145 NDUFS5O43920 106 aa9.4□□□□□ -0.9
HLA-DQB2-231ENST00000435145 Q6ZSA8 131 aa9.39□□□□□ -0.91
HLA-DQB2-231ENST00000435145 PCOTHQ58A44 107 aa9.38□□□□□ -0.91
HLA-DQB2-231ENST00000435145 KRTAP13-3Q3SY46 172 aa9.36□□□□□ -0.91
HLA-DQB2-231ENST00000435145 C1orf195Q5TG92 126 aa9.36□□□□□ -0.91
HLA-DQB2-231ENST00000435145 SPINK6Q6UWN8 80 aa9.36□□□□□ -0.91
HLA-DQB2-231ENST00000435145 COA5Q86WW8 74 aa9.36□□□□□ -0.91
HLA-DQB2-231ENST00000435145 Q8N9P0 234 aaPredicted RBP9.36□□□□□ -0.91
HLA-DQB2-231ENST00000435145 PSPHP1O15172 72 aa9.35□□□□□ -0.91
HLA-DQB2-231ENST00000435145 DNAH11Q96DT5 4516 aa9.35□□□□□ -0.91
HLA-DQB2-231ENST00000435145 ALMS1Q8TCU4 4167 aa9.35□□□□□ -0.91
HLA-DQB2-231ENST00000435145 DNAH5Q8TE73 4624 aa9.34□□□□□ -0.91
HLA-DQB2-231ENST00000435145 C8orf87E5RJ46 101 aa9.34□□□□□ -0.91
HLA-DQB2-231ENST00000435145 KRTAP10-1P60331 282 aa9.33□□□□□ -0.92
HLA-DQB2-231ENST00000435145 KRTAP13-2Q52LG2 175 aa9.32□□□□□ -0.92
HLA-DQB2-231ENST00000435145 Q5W150 140 aa9.32□□□□□ -0.92
HLA-DQB2-231ENST00000435145 LOC101927531A0A1B0GV80 90 aa9.31□□□□□ -0.92
HLA-DQB2-231ENST00000435145 A8MUN3 132 aa9.31□□□□□ -0.92
HLA-DQB2-231ENST00000435145 LIMD2Q9BT23 127 aa9.31□□□□□ -0.92
HLA-DQB2-231ENST00000435145 Q5VV11 94 aa9.29□□□□□ -0.92
HLA-DQB2-231ENST00000435145 KRTAP1-4P0C5Y4 121 aa9.25□□□□□ -0.93
HLA-DQB2-231ENST00000435145 PKD1P98161 4303 aa9.24□□□□□ -0.93
HLA-DQB2-231ENST00000435145 HRES1P13985 223 aa9.24□□□□□ -0.93
HLA-DQB2-231ENST00000435145 LINC00313P59037 77 aa9.22□□□□□ -0.93
HLA-DQB2-231ENST00000435145 LRP1BQ9NZR2 4599 aa9.21□□□□□ -0.94
HLA-DQB2-231ENST00000435145 PRR15LQ9BU68 103 aa9.2□□□□□ -0.94
HLA-DQB2-231ENST00000435145 FAT2Q9NYQ8 4349 aa9.19□□□□□ -0.94
HLA-DQB2-231ENST00000435145 KRTAP16-1A8MUX0 517 aa9.18□□□□□ -0.94
HLA-DQB2-231ENST00000435145 Q75L30 129 aa9.18□□□□□ -0.94
HLA-DQB2-231ENST00000435145 FAM229AH3BQW9 127 aa9.17□□□□□ -0.94
HLA-DQB2-231ENST00000435145 LINC01558Q9Y6Z2 57 aa9.17□□□□□ -0.94
HLA-DQB2-231ENST00000435145 CHKB-CPT1BH3BT56 60 aa9.15□□□□□ -0.94
HLA-DQB2-231ENST00000435145 HYDINQ4G0P3 5121 aa9.12□□□□□ -0.95
HLA-DQB2-231ENST00000435145 SPAG11AQ6PDA7 123 aa9.12□□□□□ -0.95
HLA-DQB2-231ENST00000435145 IGKV2-30P06310 120 aa9.11□□□□□ -0.95
HLA-DQB2-231ENST00000435145 DMAC1Q96GE9 116 aa9.1□□□□□ -0.95
HLA-DQB2-231ENST00000435145 A8MU10 97 aa9.09□□□□□ -0.95
HLA-DQB2-231ENST00000435145 PLA2G1BP04054 148 aaKnown RBP9.09□□□□□ -0.95
HLA-DQB2-231ENST00000435145 ACYP2P14621 99 aa9.09□□□□□ -0.95
HLA-DQB2-231ENST00000435145 VPS13BQ7Z7G8 4022 aa9.07□□□□□ -0.96
HLA-DQB2-231ENST00000435145 SPINK1P00995 79 aa9.07□□□□□ -0.96
HLA-DQB2-231ENST00000435145 TYMSOSQ8TAI1 123 aa9.06□□□□□ -0.96
HLA-DQB2-231ENST00000435145 C4orf48Q5BLP8 95 aa9.04□□□□□ -0.96
HLA-DQB2-231ENST00000435145 LCA10Q71F78 164 aa9.04□□□□□ -0.96
HLA-DQB2-231ENST00000435145 PRR26Q8N8Z3 221 aa9.04□□□□□ -0.96
HLA-DQB2-231ENST00000435145 RETNLBQ9BQ08 111 aa9.04□□□□□ -0.96
HLA-DQB2-231ENST00000435145 SACSQ9NZJ4 4579 aa9.04□□□□□ -0.96
HLA-DQB2-231ENST00000435145 A6NED7 52 aa9.02□□□□□ -0.97
HLA-DQB2-231ENST00000435145 KMT2CQ8NEZ4 4911 aaKnown RBP9.02□□□□□ -0.97
HLA-DQB2-231ENST00000435145 RPS29P62273 56 aaKnown RBP9.01□□□□□ -0.97
HLA-DQB2-231ENST00000435145 CDC42SE1Q9NRR8 79 aa8.98□□□□□ -0.97
HLA-DQB2-231ENST00000435145 LINC00304Q8N9R0 145 aa8.96□□□□□ -0.98
HLA-DQB2-231ENST00000435145 ATP11AUNQ6ZP68 121 aa8.95□□□□□ -0.98
HLA-DQB2-231ENST00000435145 SPINK7P58062 85 aa8.93□□□□□ -0.98
HLA-DQB2-231ENST00000435145 IGKV2D-30A0A075B6S6 120 aa8.92□□□□□ -0.98
HLA-DQB2-231ENST00000435145 PMAIP1Q13794 54 aa8.92□□□□□ -0.98
HLA-DQB2-231ENST00000435145 PKHD1P08F94 4074 aa8.9□□□□□ -0.98
HLA-DQB2-231ENST00000435145 A0A1B0GVY2 172 aa8.9□□□□□ -0.99
HLA-DQB2-231ENST00000435145 RYR2Q92736 4967 aa8.89□□□□□ -0.99
HLA-DQB2-231ENST00000435145 KRTAP10-4P60372 401 aaPredicted RBP8.88□□□□□ -0.99
HLA-DQB2-231ENST00000435145 SPTSSBQ8NFR3 76 aa8.86□□□□□ -0.99
HLA-DQB2-231ENST00000435145 DYNC1H1Q14204 4646 aaKnown RBP8.86□□□□□ -0.99
HLA-DQB2-231ENST00000435145 SMR3BP02814 79 aaPredicted RBP8.85□□□□□ -0.99
HLA-DQB2-231ENST00000435145 RYR3Q15413 4870 aa8.84□□□□□ -0.99
HLA-DQB2-231ENST00000435145 C7orf65Q6ZTY9 151 aa8.83□□□□□ -1
HLA-DQB2-231ENST00000435145 A6NN06 94 aa8.83□□□□□ -1
HLA-DQB2-231ENST00000435145 A0A1B0GU69 56 aa8.8□□□□□ -1
HLA-DQB2-231ENST00000435145 C20orf166-AS1Q96NR2 134 aa8.79□□□□□ -1
HLA-DQB2-231ENST00000435145 A8MUU9 505 aa8.78□□□□□ -1
HLA-DQB2-231ENST00000435145 PKHD1L1Q86WI1 4243 aa8.77□□□□□ -1
HLA-DQB2-231ENST00000435145 APOBP04114 4563 aaKnown RBP8.75□□□□□ -1.01
HLA-DQB2-231ENST00000435145 SEC61GP60059 68 aa8.75□□□□□ -1.01
HLA-DQB2-231ENST00000435145 KTN1-AS1Q86SY8 53 aa8.75□□□□□ -1.01
HLA-DQB2-231ENST00000435145 Q8N1X5 172 aa8.71□□□□□ -1.02
HLA-DQB2-231ENST00000435145 C9orf92A6NGG3 77 aa8.7□□□□□ -1.02
HLA-DQB2-231ENST00000435145 SPATA8Q6RVD6 105 aa8.7□□□□□ -1.02
HLA-DQB2-231ENST00000435145 FAT1Q14517 4588 aa8.69□□□□□ -1.02
HLA-DQB2-231ENST00000435145 UQCR11O14957 56 aa8.64□□□□□ -1.03
HLA-DQB2-231ENST00000435145 MIR22HGQ0VDD5 57 aa8.61□□□□□ -1.03
HLA-DQB2-231ENST00000435145 KRTAP3-1Q9BYR8 98 aa8.61□□□□□ -1.03
HLA-DQB2-231ENST00000435145 FLG2Q5D862 2391 aaPredicted RBP8.57□□□□□ -1.04
HLA-DQB2-231ENST00000435145 EPPK1P58107 5090 aaKnown RBP8.52□□□□□ -1.04
HLA-DQB2-231ENST00000435145 KRTAP10-8P60410 259 aa8.52□□□□□ -1.05
HLA-DQB2-231ENST00000435145 RBM12B-AS1Q9P1G2 102 aa8.48□□□□□ -1.05
HLA-DQB2-231ENST00000435145 COX6B2Q6YFQ2 88 aa8.47□□□□□ -1.05
HLA-DQB2-231ENST00000435145 FAT3Q8TDW7 4589 aa8.43□□□□□ -1.06
HLA-DQB2-231ENST00000435145 TNXBP22105 4242 aa8.43□□□□□ -1.06
HLA-DQB2-231ENST00000435145 Q5VSD8 79 aa8.42□□□□□ -1.06
HLA-DQB2-231ENST00000435145 H0YAA0 97 aa8.39□□□□□ -1.07
HLA-DQB2-231ENST00000435145 RPL37P61927 97 aaKnown RBP8.37□□□□□ -1.07
HLA-DQB2-231ENST00000435145 LRP1Q07954 4544 aaKnown RBP8.37□□□□□ -1.07
HLA-DQB2-231ENST00000435145 HSPG2P98160 4391 aa8.36□□□□□ -1.07
HLA-DQB2-231ENST00000435145 KIAA1109Q2LD37 5005 aa8.36□□□□□ -1.07
HLA-DQB2-231ENST00000435145 A0A1B0GU33 70 aa8.35□□□□□ -1.07
HLA-DQB2-231ENST00000435145 H1FX-AS1Q4G0G2 97 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms