RNA–Protein interactions for RNA: ENST00000434436.7

MBD3-202, Transcript of methyl-CpG binding domain protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MBD3, Length 2,439 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-202ENST00000434436 FAM229BQ4G0N7 80 aa13.83□□□□□ -0.19
MBD3-202ENST00000434436 KRTAP1-4P0C5Y4 121 aa13.83□□□□□ -0.2
MBD3-202ENST00000434436 TP53AIP1Q9HCN2 124 aa13.8□□□□□ -0.2
MBD3-202ENST00000434436 C1orf64Q8NEQ6 169 aa13.8□□□□□ -0.2
MBD3-202ENST00000434436 MRPL34Q9BQ48 92 aaKnown RBP13.8□□□□□ -0.2
MBD3-202ENST00000434436 SMIM26A0A096LP01 95 aa13.79□□□□□ -0.2
MBD3-202ENST00000434436 PKHD1P08F94 4074 aa13.79□□□□□ -0.2
MBD3-202ENST00000434436 C4orf26Q17RF5 130 aa13.78□□□□□ -0.2
MBD3-202ENST00000434436 FP248Q71RG6 208 aaPredicted RBP13.78□□□□□ -0.2
MBD3-202ENST00000434436 PRR4Q16378 134 aa13.76□□□□□ -0.21
MBD3-202ENST00000434436 NDUFS5O43920 106 aa13.75□□□□□ -0.21
MBD3-202ENST00000434436 CYP4F30PQ9H0H9 118 aa13.74□□□□□ -0.21
MBD3-202ENST00000434436 LINC00336Q6ZUF6 198 aa13.7□□□□□ -0.22
MBD3-202ENST00000434436 SVIPQ8NHG7 77 aa13.7□□□□□ -0.22
MBD3-202ENST00000434436 C1orf195Q5TG92 126 aa13.68□□□□□ -0.22
MBD3-202ENST00000434436 SPANXA2-OT1Q8N9U9 137 aa13.67□□□□□ -0.22
MBD3-202ENST00000434436 DYNC1H1Q14204 4646 aaKnown RBP13.66□□□□□ -0.22
MBD3-202ENST00000434436 PLA2G1BP04054 148 aaKnown RBP13.66□□□□□ -0.22
MBD3-202ENST00000434436 A0A1B0GVY2 172 aa13.65□□□□□ -0.22
MBD3-202ENST00000434436 C8orf87E5RJ46 101 aa13.63□□□□□ -0.23
MBD3-202ENST00000434436 TYMSOSQ8TAI1 123 aa13.59□□□□□ -0.23
MBD3-202ENST00000434436 PCOTHQ58A44 107 aa13.58□□□□□ -0.24
MBD3-202ENST00000434436 Q5W150 140 aa13.58□□□□□ -0.24
MBD3-202ENST00000434436 SMR3BP02814 79 aaPredicted RBP13.57□□□□□ -0.24
MBD3-202ENST00000434436 LINC00313P59037 77 aa13.57□□□□□ -0.24
MBD3-202ENST00000434436 LIMD2Q9BT23 127 aa13.57□□□□□ -0.24
MBD3-202ENST00000434436 KRTAP13-3Q3SY46 172 aa13.55□□□□□ -0.24
MBD3-202ENST00000434436 MPLKIPQ8TAP9 179 aa13.55□□□□□ -0.24
MBD3-202ENST00000434436 IGLV7-46A0A075B6I9 117 aa13.53□□□□□ -0.24
MBD3-202ENST00000434436 C4orf48Q5BLP8 95 aa13.52□□□□□ -0.25
MBD3-202ENST00000434436 RYR2Q92736 4967 aa13.51□□□□□ -0.25
MBD3-202ENST00000434436 PRR26Q8N8Z3 221 aa13.5□□□□□ -0.25
MBD3-202ENST00000434436 APOBP04114 4563 aaKnown RBP13.5□□□□□ -0.25
MBD3-202ENST00000434436 SPINK1P00995 79 aa13.49□□□□□ -0.25
MBD3-202ENST00000434436 Q8N9P0 234 aaPredicted RBP13.48□□□□□ -0.25
MBD3-202ENST00000434436 KRTAP16-1A8MUX0 517 aa13.46□□□□□ -0.25
MBD3-202ENST00000434436 KRTAP10-4P60372 401 aaPredicted RBP13.45□□□□□ -0.26
MBD3-202ENST00000434436 LOC101927531A0A1B0GV80 90 aa13.44□□□□□ -0.26
MBD3-202ENST00000434436 FAT1Q14517 4588 aa13.43□□□□□ -0.26
MBD3-202ENST00000434436 LINC00304Q8N9R0 145 aa13.41□□□□□ -0.26
MBD3-202ENST00000434436 Q1T7F1 81 aa13.39□□□□□ -0.27
MBD3-202ENST00000434436 KMT2CQ8NEZ4 4911 aaKnown RBP13.38□□□□□ -0.27
MBD3-202ENST00000434436 FAM229AH3BQW9 127 aa13.36□□□□□ -0.27
MBD3-202ENST00000434436 RETNLBQ9BQ08 111 aa13.36□□□□□ -0.27
MBD3-202ENST00000434436 COA5Q86WW8 74 aa13.35□□□□□ -0.27
MBD3-202ENST00000434436 RPS29P62273 56 aaKnown RBP13.34□□□□□ -0.27
MBD3-202ENST00000434436 SPAG11AQ6PDA7 123 aa13.33□□□□□ -0.28
MBD3-202ENST00000434436 PKHD1L1Q86WI1 4243 aa13.3□□□□□ -0.28
MBD3-202ENST00000434436 IGKV2-30P06310 120 aa13.24□□□□□ -0.29
MBD3-202ENST00000434436 HRES1P13985 223 aa13.24□□□□□ -0.29
MBD3-202ENST00000434436 PSPHP1O15172 72 aa13.2□□□□□ -0.3
MBD3-202ENST00000434436 V9GYY9 64 aa13.2□□□□□ -0.3
MBD3-202ENST00000434436 A8MUN3 132 aa13.14□□□□□ -0.31
MBD3-202ENST00000434436 BRK1Q8WUW1 75 aa13.1□□□□□ -0.31
MBD3-202ENST00000434436 IGKV2D-30A0A075B6S6 120 aa13.1□□□□□ -0.31
MBD3-202ENST00000434436 DMAC1Q96GE9 116 aa13.09□□□□□ -0.31
MBD3-202ENST00000434436 PRO0628Q9UI54 55 aa13.08□□□□□ -0.32
MBD3-202ENST00000434436 Q5VV11 94 aa13.07□□□□□ -0.32
MBD3-202ENST00000434436 ACYP2P14621 99 aa13.06□□□□□ -0.32
MBD3-202ENST00000434436 C9orf92A6NGG3 77 aa13.03□□□□□ -0.32
MBD3-202ENST00000434436 PRR15LQ9BU68 103 aa13.03□□□□□ -0.32
MBD3-202ENST00000434436 HSPG2P98160 4391 aa13.02□□□□□ -0.33
MBD3-202ENST00000434436 RYR3Q15413 4870 aa13.01□□□□□ -0.33
MBD3-202ENST00000434436 FLG2Q5D862 2391 aaPredicted RBP12.99□□□□□ -0.33
MBD3-202ENST00000434436 LINC01558Q9Y6Z2 57 aa12.98□□□□□ -0.33
MBD3-202ENST00000434436 Q5VSD8 79 aa12.97□□□□□ -0.33
MBD3-202ENST00000434436 A8MUU9 505 aa12.96□□□□□ -0.33
MBD3-202ENST00000434436 C20orf166-AS1Q96NR2 134 aa12.96□□□□□ -0.33
MBD3-202ENST00000434436 Q8N1X5 172 aa12.94□□□□□ -0.34
MBD3-202ENST00000434436 LRP1Q07954 4544 aaKnown RBP12.93□□□□□ -0.34
MBD3-202ENST00000434436 TNXBP22105 4242 aa12.92□□□□□ -0.34
MBD3-202ENST00000434436 C7orf65Q6ZTY9 151 aa12.92□□□□□ -0.34
MBD3-202ENST00000434436 KRTAP10-8P60410 259 aa12.91□□□□□ -0.34
MBD3-202ENST00000434436 CHKB-CPT1BH3BT56 60 aa12.9□□□□□ -0.34
MBD3-202ENST00000434436 Q75L30 129 aa12.89□□□□□ -0.35
MBD3-202ENST00000434436 KRTAP17-1Q9BYP8 105 aa12.88□□□□□ -0.35
MBD3-202ENST00000434436 RYR1P21817 5038 aa12.87□□□□□ -0.35
MBD3-202ENST00000434436 FAT3Q8TDW7 4589 aa12.84□□□□□ -0.35
MBD3-202ENST00000434436 A8MU10 97 aa12.79□□□□□ -0.36
MBD3-202ENST00000434436 A6NED7 52 aa12.73□□□□□ -0.37
MBD3-202ENST00000434436 KIAA1109Q2LD37 5005 aa12.69□□□□□ -0.38
MBD3-202ENST00000434436 LCA10Q71F78 164 aa12.68□□□□□ -0.38
MBD3-202ENST00000434436 DMBT1Q9UGM3 2413 aaPredicted RBP12.67□□□□□ -0.38
MBD3-202ENST00000434436 SPINK7P58062 85 aa12.67□□□□□ -0.38
MBD3-202ENST00000434436 MT1HL1P0DM35 61 aa12.6□□□□□ -0.39
MBD3-202ENST00000434436 KRTAP3-1Q9BYR8 98 aa12.59□□□□□ -0.39
MBD3-202ENST00000434436 CDC42SE1Q9NRR8 79 aa12.58□□□□□ -0.4
MBD3-202ENST00000434436 A0A1B0GU69 56 aa12.57□□□□□ -0.4
MBD3-202ENST00000434436 MYCBP2O75592 4640 aa12.54□□□□□ -0.4
MBD3-202ENST00000434436 EPPK1P58107 5090 aaKnown RBP12.54□□□□□ -0.4
MBD3-202ENST00000434436 ATP11AUNQ6ZP68 121 aa12.5□□□□□ -0.41
MBD3-202ENST00000434436 RPL37P61927 97 aaKnown RBP12.49□□□□□ -0.41
MBD3-202ENST00000434436 XP32Q5T750 250 aa12.49□□□□□ -0.41
MBD3-202ENST00000434436 SPTSSBQ8NFR3 76 aa12.45□□□□□ -0.42
MBD3-202ENST00000434436 COX6B2Q6YFQ2 88 aa12.42□□□□□ -0.42
MBD3-202ENST00000434436 PMAIP1Q13794 54 aa12.37□□□□□ -0.43
MBD3-202ENST00000434436 KRTAP4-5Q9BYR2 181 aa12.3□□□□□ -0.44
MBD3-202ENST00000434436 UQCR11O14957 56 aa12.29□□□□□ -0.44
MBD3-202ENST00000434436 SPATA8Q6RVD6 105 aa12.29□□□□□ -0.44
MBD3-202ENST00000434436 SEC61GP60059 68 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 193 ms