RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 TEN1Q86WV5 123 aa3□□□□□ -1.93
PTPRK-212ENST00000434424 CDC42SE1Q9NRR8 79 aa3□□□□□ -1.93
PTPRK-212ENST00000434424 SNURFQ9Y675 71 aa3□□□□□ -1.93
PTPRK-212ENST00000434424 MRPL54Q6P161 138 aaKnown RBP2.99□□□□□ -1.93
PTPRK-212ENST00000434424 SMIM2Q9BVW6 85 aa2.99□□□□□ -1.93
PTPRK-212ENST00000434424 TMEM242Q9NWH2 141 aa2.99□□□□□ -1.93
PTPRK-212ENST00000434424 F8W1H4 67 aa2.98□□□□□ -1.93
PTPRK-212ENST00000434424 J3QR89 54 aa2.98□□□□□ -1.93
PTPRK-212ENST00000434424 BCE1O60756 84 aa2.98□□□□□ -1.93
PTPRK-212ENST00000434424 CKS2P33552 79 aa2.98□□□□□ -1.93
PTPRK-212ENST00000434424 POLR2KP53803 58 aaKnown RBP2.98□□□□□ -1.93
PTPRK-212ENST00000434424 CASC2Q6XLA1 102 aa2.98□□□□□ -1.93
PTPRK-212ENST00000434424 C5orf38Q86SI9 138 aa2.98□□□□□ -1.93
PTPRK-212ENST00000434424 C20orf78Q9BR46 151 aa2.98□□□□□ -1.93
PTPRK-212ENST00000434424 D6R8Y8 96 aa2.97□□□□□ -1.93
PTPRK-212ENST00000434424 AKR1D1P51857 326 aa2.97□□□□□ -1.93
PTPRK-212ENST00000434424 CDC42SE2Q9NRR3 84 aa2.97□□□□□ -1.93
PTPRK-212ENST00000434424 TRBV30A0A0K0K1B3 111 aa2.96□□□□□ -1.94
PTPRK-212ENST00000434424 COX7CP15954 63 aa2.96□□□□□ -1.94
PTPRK-212ENST00000434424 S100PP25815 95 aa2.96□□□□□ -1.94
PTPRK-212ENST00000434424 IFI27P40305 119 aaPredicted RBP2.96□□□□□ -1.94
PTPRK-212ENST00000434424 MIR22HGQ0VDD5 57 aa2.96□□□□□ -1.94
PTPRK-212ENST00000434424 Q6ZUT4 128 aa2.96□□□□□ -1.94
PTPRK-212ENST00000434424 FAM19A2Q8N3H0 131 aa2.96□□□□□ -1.94
PTPRK-212ENST00000434424 SEC11CQ9BY50 192 aa2.96□□□□□ -1.94
PTPRK-212ENST00000434424 CYSTM1Q9H1C7 97 aa2.96□□□□□ -1.94
PTPRK-212ENST00000434424 TMEM218A2RU14 115 aa2.95□□□□□ -1.94
PTPRK-212ENST00000434424 K7EMI3 77 aa2.95□□□□□ -1.94
PTPRK-212ENST00000434424 ADCYAP1P18509 176 aa2.95□□□□□ -1.94
PTPRK-212ENST00000434424 MT1HP80294 61 aa2.95□□□□□ -1.94
PTPRK-212ENST00000434424 UNQ6190/PRO20217Q6UXQ8 127 aa2.95□□□□□ -1.94
PTPRK-212ENST00000434424 COX6B2Q6YFQ2 88 aa2.95□□□□□ -1.94
PTPRK-212ENST00000434424 VPS25Q9BRG1 176 aa2.95□□□□□ -1.94
PTPRK-212ENST00000434424 IGKV3D-7A0A0C4DH55 119 aa2.94□□□□□ -1.94
PTPRK-212ENST00000434424 LOC107984156A0A0G2JMH3 177 aa2.94□□□□□ -1.94
PTPRK-212ENST00000434424 H3BRM9 83 aa2.94□□□□□ -1.94
PTPRK-212ENST00000434424 ARL17AQ8IVW1 177 aa2.94□□□□□ -1.94
PTPRK-212ENST00000434424 TMEM141Q96I45 108 aa2.94□□□□□ -1.94
PTPRK-212ENST00000434424 C2orf88Q9BSF0 95 aa2.94□□□□□ -1.94
PTPRK-212ENST00000434424 NXT2Q9NPJ8 142 aaKnown RBP2.94□□□□□ -1.94
PTPRK-212ENST00000434424 C6orf48Q9UBA6 75 aa2.94□□□□□ -1.94
PTPRK-212ENST00000434424 C22orf24Q9Y442 160 aa2.94□□□□□ -1.94
PTPRK-212ENST00000434424 LINC01549A6NIU2 74 aa2.93□□□□□ -1.94
PTPRK-212ENST00000434424 RPL39P62891 51 aaKnown RBP2.93□□□□□ -1.94
PTPRK-212ENST00000434424 Q8N8P6 123 aa2.93□□□□□ -1.94
PTPRK-212ENST00000434424 SYNE2Q8WXH0 6885 aaKnown RBP2.92□□□□□ -1.94
PTPRK-212ENST00000434424 MUC19Q7Z5P9 8384 aa2.92□□□□□ -1.94
PTPRK-212ENST00000434424 SPINK1P00995 79 aa2.92□□□□□ -1.94
PTPRK-212ENST00000434424 SEC11AP67812 179 aa2.92□□□□□ -1.94
PTPRK-212ENST00000434424 SVBPQ8N300 66 aa2.92□□□□□ -1.94
PTPRK-212ENST00000434424 K7ERU9 68 aa2.91□□□□□ -1.94
PTPRK-212ENST00000434424 KRTAP4-1Q9BYQ7 146 aa2.91□□□□□ -1.94
PTPRK-212ENST00000434424 SMCO4Q9NRQ5 59 aa2.91□□□□□ -1.94
PTPRK-212ENST00000434424 LINC00846Q9NV44 126 aa2.91□□□□□ -1.94
PTPRK-212ENST00000434424 LOC110117498A0A087WWA1 95 aa2.9□□□□□ -1.95
PTPRK-212ENST00000434424 INE1O15225 51 aa2.9□□□□□ -1.95
PTPRK-212ENST00000434424 APOC3P02656 99 aa2.9□□□□□ -1.95
PTPRK-212ENST00000434424 KRTAP12-3P60328 96 aa2.9□□□□□ -1.95
PTPRK-212ENST00000434424 AMELXQ99217 191 aa2.89□□□□□ -1.95
PTPRK-212ENST00000434424 LINC01546A6NGU7 62 aa2.88□□□□□ -1.95
PTPRK-212ENST00000434424 IGIPA6NJ69 53 aa2.88□□□□□ -1.95
PTPRK-212ENST00000434424 DNAL4O96015 105 aa2.88□□□□□ -1.95
PTPRK-212ENST00000434424 Q8IZM0 81 aa2.88□□□□□ -1.95
PTPRK-212ENST00000434424 TOMM7Q9P0U1 55 aa2.88□□□□□ -1.95
PTPRK-212ENST00000434424 ERG28Q9UKR5 140 aa2.88□□□□□ -1.95
PTPRK-212ENST00000434424 RPS29P62273 56 aaKnown RBP2.87□□□□□ -1.95
PTPRK-212ENST00000434424 PRLHP81277 87 aa2.87□□□□□ -1.95
PTPRK-212ENST00000434424 C18orf32Q8TCD1 76 aa2.87□□□□□ -1.95
PTPRK-212ENST00000434424 MACF1Q9UPN3 7388 aaKnown RBP2.86□□□□□ -1.95
PTPRK-212ENST00000434424 FAM236AA0A1B0GUQ0 79 aa2.86□□□□□ -1.95
PTPRK-212ENST00000434424 FAM236BA0A1B0GV22 79 aa2.86□□□□□ -1.95
PTPRK-212ENST00000434424 F8VRH5 84 aa2.86□□□□□ -1.95
PTPRK-212ENST00000434424 SFTA2Q6UW10 78 aa2.86□□□□□ -1.95
PTPRK-212ENST00000434424 CDKN2A-AS1Q9UH64 79 aa2.86□□□□□ -1.95
PTPRK-212ENST00000434424 MUC17Q685J3 4493 aa2.85□□□□□ -1.95
PTPRK-212ENST00000434424 A6NN06 94 aa2.84□□□□□ -1.95
PTPRK-212ENST00000434424 IGLC3P0DOY3 106 aa2.84□□□□□ -1.95
PTPRK-212ENST00000434424 KRTAP19-2Q3LHN2 52 aa2.84□□□□□ -1.95
PTPRK-212ENST00000434424 COX7B2Q8TF08 81 aa2.84□□□□□ -1.95
PTPRK-212ENST00000434424 SPINK8P0C7L1 97 aa2.83□□□□□ -1.96
PTPRK-212ENST00000434424 PMCHL1Q16048 86 aa2.83□□□□□ -1.96
PTPRK-212ENST00000434424 BAGE3Q86Y29 109 aa2.83□□□□□ -1.96
PTPRK-212ENST00000434424 SPRR4Q96PI1 79 aa2.83□□□□□ -1.96
PTPRK-212ENST00000434424 TMEM170BQ5T4T1 132 aa2.82□□□□□ -1.96
PTPRK-212ENST00000434424 SSBP3-AS1Q7Z2R9 100 aa2.82□□□□□ -1.96
PTPRK-212ENST00000434424 IFI27L1Q96BM0 104 aa2.82□□□□□ -1.96
PTPRK-212ENST00000434424 JMJD7-PLA2G4BH0Y9G9 81 aa2.81□□□□□ -1.96
PTPRK-212ENST00000434424 PLNP26678 52 aa2.81□□□□□ -1.96
PTPRK-212ENST00000434424 COX17Q14061 63 aa2.81□□□□□ -1.96
PTPRK-212ENST00000434424 LIMD2Q9BT23 127 aa2.81□□□□□ -1.96
PTPRK-212ENST00000434424 TRBV20-1A0A075B6N2 111 aa2.8□□□□□ -1.96
PTPRK-212ENST00000434424 LEPROTL1O95214 131 aa2.8□□□□□ -1.96
PTPRK-212ENST00000434424 C9orf92A6NGG3 77 aa2.79□□□□□ -1.96
PTPRK-212ENST00000434424 C9orf153Q5TBE3 101 aa2.79□□□□□ -1.96
PTPRK-212ENST00000434424 OBSCN-AS1Q96MR7 158 aa2.79□□□□□ -1.96
PTPRK-212ENST00000434424 LINC00587B1AMM8 73 aa2.78□□□□□ -1.96
PTPRK-212ENST00000434424 MEIG1Q5JSS6 88 aa2.78□□□□□ -1.96
PTPRK-212ENST00000434424 ATOH7Q8N100 152 aa2.78□□□□□ -1.96
PTPRK-212ENST00000434424 MYMXA0A1B0GTQ4 84 aa2.77□□□□□ -1.97
PTPRK-212ENST00000434424 ETDCA0A1B0GVM5 59 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms