RNA–Protein interactions for RNA: ENST00000432907.6

PKNOX1-203, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2 BASIC

Gene PKNOX1, Length 5,180 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-203ENST00000432907 TEX15Q9BXT5 2789 aa6.05□□□□□ -1.44
PKNOX1-203ENST00000432907 TEP1Q99973 2627 aaKnown RBP6.04□□□□□ -1.44
PKNOX1-203ENST00000432907 DMXL1Q9Y485 3027 aa6.04□□□□□ -1.44
PKNOX1-203ENST00000432907 ATMQ13315 3056 aa6.03□□□□□ -1.44
PKNOX1-203ENST00000432907 ASH1LQ9NR48 2969 aaKnown RBP6.03□□□□□ -1.44
PKNOX1-203ENST00000432907 CSMD1Q96PZ7 3565 aa6.02□□□□□ -1.45
PKNOX1-203ENST00000432907 ZZEF1O43149 2961 aa6.01□□□□□ -1.45
PKNOX1-203ENST00000432907 M0QZ58 72 aa6□□□□□ -1.45
PKNOX1-203ENST00000432907 KRTAP7-1Q8IUC3 87 aa6□□□□□ -1.45
PKNOX1-203ENST00000432907 KRTAP11-1Q8IUC1 163 aa6□□□□□ -1.45
PKNOX1-203ENST00000432907 SETXQ7Z333 2677 aaKnown RBP5.96□□□□□ -1.45
PKNOX1-203ENST00000432907 NSD1Q96L73 2696 aaPredicted RBP5.96□□□□□ -1.45
PKNOX1-203ENST00000432907 UBR5O95071 2799 aaPredicted RBP5.96□□□□□ -1.46
PKNOX1-203ENST00000432907 SVEP1Q4LDE5 3571 aa5.95□□□□□ -1.46
PKNOX1-203ENST00000432907 LRBAP50851 2863 aa5.95□□□□□ -1.46
PKNOX1-203ENST00000432907 PLAC4Q8WY50 150 aa5.95□□□□□ -1.46
PKNOX1-203ENST00000432907 COL12A1Q99715 3063 aa5.95□□□□□ -1.46
PKNOX1-203ENST00000432907 C20orf166-AS1Q96NR2 134 aa5.95□□□□□ -1.46
PKNOX1-203ENST00000432907 UTP20O75691 2785 aaKnown RBP5.94□□□□□ -1.46
PKNOX1-203ENST00000432907 ADGRG4Q8IZF6 3080 aa5.94□□□□□ -1.46
PKNOX1-203ENST00000432907 CUBNO60494 3623 aa5.93□□□□□ -1.46
PKNOX1-203ENST00000432907 BSNQ9UPA5 3926 aa5.93□□□□□ -1.46
PKNOX1-203ENST00000432907 LAMA5O15230 3695 aa5.92□□□□□ -1.46
PKNOX1-203ENST00000432907 APCP25054 2843 aa5.92□□□□□ -1.46
PKNOX1-203ENST00000432907 ITPR2Q14571 2701 aa5.91□□□□□ -1.46
PKNOX1-203ENST00000432907 TACC2O95359 2948 aa5.9□□□□□ -1.46
PKNOX1-203ENST00000432907 KRTAP21-3Q3LHN1 58 aa5.9□□□□□ -1.47
PKNOX1-203ENST00000432907 KMT2BQ9UMN6 2715 aaPredicted RBP5.89□□□□□ -1.47
PKNOX1-203ENST00000432907 HIVEP1P15822 2718 aa5.88□□□□□ -1.47
PKNOX1-203ENST00000432907 DCHS2Q6V1P9 2916 aa5.88□□□□□ -1.47
PKNOX1-203ENST00000432907 M0R2T5 61 aa5.86□□□□□ -1.47
PKNOX1-203ENST00000432907 KRTAP13-1Q8IUC0 172 aa5.85□□□□□ -1.47
PKNOX1-203ENST00000432907 HRNRQ86YZ3 2850 aaPredicted RBP5.82□□□□□ -1.48
PKNOX1-203ENST00000432907 C10orf95Q9H7T3 257 aa5.82□□□□□ -1.48
PKNOX1-203ENST00000432907 KRTAP10-1P60331 282 aa5.8□□□□□ -1.48
PKNOX1-203ENST00000432907 H0YAA0 97 aa5.8□□□□□ -1.48
PKNOX1-203ENST00000432907 KRTAP10-2P60368 255 aa5.79□□□□□ -1.48
PKNOX1-203ENST00000432907 SEC61BP60468 96 aaKnown RBP5.78□□□□□ -1.48
PKNOX1-203ENST00000432907 ZFHX3Q15911 3703 aa5.78□□□□□ -1.48
PKNOX1-203ENST00000432907 KRTAP13-2Q52LG2 175 aa5.75□□□□□ -1.49
PKNOX1-203ENST00000432907 ZANQ9Y493 2812 aa5.72□□□□□ -1.49
PKNOX1-203ENST00000432907 P0C880 135 aa5.7□□□□□ -1.5
PKNOX1-203ENST00000432907 RPS29P62273 56 aaKnown RBP5.7□□□□□ -1.5
PKNOX1-203ENST00000432907 Q6ZRN7 208 aaPredicted RBP5.7□□□□□ -1.5
PKNOX1-203ENST00000432907 CELSR2Q9HCU4 2923 aa5.7□□□□□ -1.5
PKNOX1-203ENST00000432907 CSMD2Q7Z408 3487 aa5.69□□□□□ -1.5
PKNOX1-203ENST00000432907 NIPBLQ6KC79 2804 aaeCLIP5.65□□□□□ -1.5
PKNOX1-203ENST00000432907 TENM4Q6N022 2769 aa5.63□□□□□ -1.51
PKNOX1-203ENST00000432907 CRYBG3Q68DQ2 2970 aa5.62□□□□□ -1.51
PKNOX1-203ENST00000432907 CELSR1Q9NYQ6 3014 aa5.61□□□□□ -1.51
PKNOX1-203ENST00000432907 FBN2P35556 2912 aa5.61□□□□□ -1.51
PKNOX1-203ENST00000432907 TNP1P09430 55 aa5.6□□□□□ -1.51
PKNOX1-203ENST00000432907 PDZD2O15018 2839 aa5.59□□□□□ -1.52
PKNOX1-203ENST00000432907 PP632Q6XCG6 107 aa5.58□□□□□ -1.52
PKNOX1-203ENST00000432907 Q5VSD8 79 aa5.57□□□□□ -1.52
PKNOX1-203ENST00000432907 KRTAP10-8P60410 259 aa5.55□□□□□ -1.52
PKNOX1-203ENST00000432907 VPS13CQ709C8 3753 aa5.55□□□□□ -1.52
PKNOX1-203ENST00000432907 NF1P21359 2839 aa5.52□□□□□ -1.53
PKNOX1-203ENST00000432907 KRTAP13-3Q3SY46 172 aa5.52□□□□□ -1.53
PKNOX1-203ENST00000432907 MXRA5Q9NR99 2828 aa5.52□□□□□ -1.53
PKNOX1-203ENST00000432907 TGP01266 2768 aa5.52□□□□□ -1.53
PKNOX1-203ENST00000432907 OTOGQ6ZRI0 2925 aa5.43□□□□□ -1.54
PKNOX1-203ENST00000432907 KRTAP1-4P0C5Y4 121 aa5.42□□□□□ -1.54
PKNOX1-203ENST00000432907 TPRXLQ17RH7 258 aa5.42□□□□□ -1.54
PKNOX1-203ENST00000432907 TENM3Q9P273 2699 aa5.42□□□□□ -1.54
PKNOX1-203ENST00000432907 AKAP9Q99996 3911 aa5.36□□□□□ -1.55
PKNOX1-203ENST00000432907 ANK3Q12955 4377 aaKnown RBP5.36□□□□□ -1.55
PKNOX1-203ENST00000432907 KRTAP12-2P59991 146 aa5.34□□□□□ -1.56
PKNOX1-203ENST00000432907 NBPF19A0A087WUL8 3843 aa5.31□□□□□ -1.56
PKNOX1-203ENST00000432907 XP32Q5T750 250 aa5.3□□□□□ -1.56
PKNOX1-203ENST00000432907 TENM1Q9UKZ4 2725 aa5.3□□□□□ -1.56
PKNOX1-203ENST00000432907 ZNF469Q96JG9 3925 aaPredicted RBP5.25□□□□□ -1.57
PKNOX1-203ENST00000432907 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
PKNOX1-203ENST00000432907 KRTAP15-1Q3LI76 137 aa5.22□□□□□ -1.57
PKNOX1-203ENST00000432907 TENM2Q9NT68 2774 aa5.19□□□□□ -1.58
PKNOX1-203ENST00000432907 KRTAP3-1Q9BYR8 98 aa5.19□□□□□ -1.58
PKNOX1-203ENST00000432907 FBN1P35555 2871 aaKnown RBP5.18□□□□□ -1.58
PKNOX1-203ENST00000432907 VWFP04275 2813 aa5.17□□□□□ -1.58
PKNOX1-203ENST00000432907 A0A1B0GVY2 172 aa5.16□□□□□ -1.58
PKNOX1-203ENST00000432907 KRTAP13-4Q3LI77 160 aa5.15□□□□□ -1.58
PKNOX1-203ENST00000432907 PKD1L1Q8TDX9 2849 aa5.13□□□□□ -1.59
PKNOX1-203ENST00000432907 SRRM2Q9UQ35 2752 aaKnown RBP5.13□□□□□ -1.59
PKNOX1-203ENST00000432907 KRTAP10-6P60371 365 aaPredicted RBP5.1□□□□□ -1.59
PKNOX1-203ENST00000432907 CSMD3Q7Z407 3707 aa5.09□□□□□ -1.59
PKNOX1-203ENST00000432907 TRRAPQ9Y4A5 3859 aa4.99□□□□□ -1.61
PKNOX1-203ENST00000432907 KRTAP10-10P60014 251 aa4.97□□□□□ -1.61
PKNOX1-203ENST00000432907 INE1O15225 51 aa4.96□□□□□ -1.62
PKNOX1-203ENST00000432907 FBN3Q75N90 2809 aa4.95□□□□□ -1.62
PKNOX1-203ENST00000432907 PRO2289Q9P1D8 64 aa4.93□□□□□ -1.62
PKNOX1-203ENST00000432907 MEGF8Q7Z7M0 2845 aa4.93□□□□□ -1.62
PKNOX1-203ENST00000432907 HUWE1Q7Z6Z7 4374 aaKnown RBP4.93□□□□□ -1.62
PKNOX1-203ENST00000432907 DNAH1Q9P2D7 4330 aa4.92□□□□□ -1.62
PKNOX1-203ENST00000432907 KRTAP3-2Q9BYR7 98 aa4.91□□□□□ -1.62
PKNOX1-203ENST00000432907 ANK2Q01484 3957 aa4.85□□□□□ -1.63
PKNOX1-203ENST00000432907 DNAH3Q8TD57 4116 aa4.85□□□□□ -1.63
PKNOX1-203ENST00000432907 COL7A1Q02388 2944 aa4.85□□□□□ -1.63
PKNOX1-203ENST00000432907 KRTAP3-3Q9BYR6 98 aa4.84□□□□□ -1.63
PKNOX1-203ENST00000432907 DNAH9Q9NYC9 4486 aa4.81□□□□□ -1.64
PKNOX1-203ENST00000432907 ALMS1Q8TCU4 4167 aa4.81□□□□□ -1.64
PKNOX1-203ENST00000432907 CMYA5Q8N3K9 4069 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms