RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 CDK2AP2O75956 126 aa9.8□□□□□ -0.84
CHFR-203ENST00000432561 ASB16-AS1Q495Z4 193 aa9.8□□□□□ -0.84
CHFR-203ENST00000432561 PCOTHQ58A44 107 aa9.79□□□□□ -0.84
CHFR-203ENST00000432561 H3BPC8 53 aa9.76□□□□□ -0.85
CHFR-203ENST00000432561 KRTAP10-1P60331 282 aa9.75□□□□□ -0.85
CHFR-203ENST00000432561 VPS13BQ7Z7G8 4022 aa9.73□□□□□ -0.85
CHFR-203ENST00000432561 MRPL34Q9BQ48 92 aaKnown RBP9.73□□□□□ -0.85
CHFR-203ENST00000432561 BRK1Q8WUW1 75 aa9.72□□□□□ -0.85
CHFR-203ENST00000432561 PSPHP1O15172 72 aa9.71□□□□□ -0.86
CHFR-203ENST00000432561 CD164Q04900 197 aa9.71□□□□□ -0.86
CHFR-203ENST00000432561 SPANXA2-OT1Q8N9U9 137 aa9.71□□□□□ -0.86
CHFR-203ENST00000432561 TP53AIP1Q9HCN2 124 aa9.7□□□□□ -0.86
CHFR-203ENST00000432561 PKHD1P08F94 4074 aa9.7□□□□□ -0.86
CHFR-203ENST00000432561 KRTAP13-2Q52LG2 175 aa9.68□□□□□ -0.86
CHFR-203ENST00000432561 Q1T7F1 81 aa9.67□□□□□ -0.86
CHFR-203ENST00000432561 Q5W150 140 aa9.66□□□□□ -0.86
CHFR-203ENST00000432561 PRO0628Q9UI54 55 aa9.66□□□□□ -0.86
CHFR-203ENST00000432561 Q6ZSA8 131 aa9.65□□□□□ -0.86
CHFR-203ENST00000432561 SSBP3-AS1Q7Z2R9 100 aa9.64□□□□□ -0.87
CHFR-203ENST00000432561 IGLV7-46A0A075B6I9 117 aa9.63□□□□□ -0.87
CHFR-203ENST00000432561 COA5Q86WW8 74 aa9.61□□□□□ -0.87
CHFR-203ENST00000432561 A8MUN3 132 aa9.61□□□□□ -0.87
CHFR-203ENST00000432561 SACSQ9NZJ4 4579 aa9.59□□□□□ -0.87
CHFR-203ENST00000432561 RETNLBQ9BQ08 111 aa9.58□□□□□ -0.88
CHFR-203ENST00000432561 Q8N9P0 234 aaPredicted RBP9.57□□□□□ -0.88
CHFR-203ENST00000432561 KRTAP1-4P0C5Y4 121 aa9.56□□□□□ -0.88
CHFR-203ENST00000432561 C1orf195Q5TG92 126 aa9.56□□□□□ -0.88
CHFR-203ENST00000432561 KRTAP13-3Q3SY46 172 aa9.54□□□□□ -0.88
CHFR-203ENST00000432561 LINC00313P59037 77 aa9.52□□□□□ -0.88
CHFR-203ENST00000432561 Q5VV11 94 aa9.5□□□□□ -0.89
CHFR-203ENST00000432561 HRES1P13985 223 aa9.5□□□□□ -0.89
CHFR-203ENST00000432561 A8MU10 97 aa9.49□□□□□ -0.89
CHFR-203ENST00000432561 PLA2G1BP04054 148 aaKnown RBP9.49□□□□□ -0.89
CHFR-203ENST00000432561 PRR15LQ9BU68 103 aa9.49□□□□□ -0.89
CHFR-203ENST00000432561 LOC101927531A0A1B0GV80 90 aa9.49□□□□□ -0.89
CHFR-203ENST00000432561 C8orf87E5RJ46 101 aa9.49□□□□□ -0.89
CHFR-203ENST00000432561 V9GYY9 64 aa9.47□□□□□ -0.89
CHFR-203ENST00000432561 SPAG11AQ6PDA7 123 aa9.47□□□□□ -0.89
CHFR-203ENST00000432561 DYNC1H1Q14204 4646 aaKnown RBP9.47□□□□□ -0.89
CHFR-203ENST00000432561 FAT1Q14517 4588 aa9.46□□□□□ -0.9
CHFR-203ENST00000432561 SMR3BP02814 79 aaPredicted RBP9.43□□□□□ -0.9
CHFR-203ENST00000432561 TYMSOSQ8TAI1 123 aa9.43□□□□□ -0.9
CHFR-203ENST00000432561 LIMD2Q9BT23 127 aa9.43□□□□□ -0.9
CHFR-203ENST00000432561 CHKB-CPT1BH3BT56 60 aa9.42□□□□□ -0.9
CHFR-203ENST00000432561 KRTAP16-1A8MUX0 517 aa9.41□□□□□ -0.9
CHFR-203ENST00000432561 C4orf48Q5BLP8 95 aa9.39□□□□□ -0.91
CHFR-203ENST00000432561 PRR26Q8N8Z3 221 aa9.39□□□□□ -0.91
CHFR-203ENST00000432561 FAM229AH3BQW9 127 aa9.38□□□□□ -0.91
CHFR-203ENST00000432561 KRTAP21-3Q3LHN1 58 aa9.35□□□□□ -0.91
CHFR-203ENST00000432561 APOBP04114 4563 aaKnown RBP9.33□□□□□ -0.92
CHFR-203ENST00000432561 IGKV2D-30A0A075B6S6 120 aa9.33□□□□□ -0.92
CHFR-203ENST00000432561 IGKV2-30P06310 120 aa9.33□□□□□ -0.92
CHFR-203ENST00000432561 SPINK1P00995 79 aa9.31□□□□□ -0.92
CHFR-203ENST00000432561 A6NED7 52 aa9.3□□□□□ -0.92
CHFR-203ENST00000432561 Q75L30 129 aa9.3□□□□□ -0.92
CHFR-203ENST00000432561 LINC01558Q9Y6Z2 57 aa9.3□□□□□ -0.92
CHFR-203ENST00000432561 KMT2CQ8NEZ4 4911 aaKnown RBP9.3□□□□□ -0.92
CHFR-203ENST00000432561 ACYP2P14621 99 aa9.28□□□□□ -0.92
CHFR-203ENST00000432561 LINC00304Q8N9R0 145 aa9.28□□□□□ -0.92
CHFR-203ENST00000432561 LCA10Q71F78 164 aa9.27□□□□□ -0.93
CHFR-203ENST00000432561 DMAC1Q96GE9 116 aa9.27□□□□□ -0.93
CHFR-203ENST00000432561 RYR2Q92736 4967 aa9.25□□□□□ -0.93
CHFR-203ENST00000432561 SPINK7P58062 85 aa9.23□□□□□ -0.93
CHFR-203ENST00000432561 SPTSSBQ8NFR3 76 aa9.21□□□□□ -0.93
CHFR-203ENST00000432561 A0A1B0GVY2 172 aa9.21□□□□□ -0.94
CHFR-203ENST00000432561 PKHD1L1Q86WI1 4243 aa9.19□□□□□ -0.94
CHFR-203ENST00000432561 C9orf92A6NGG3 77 aa9.19□□□□□ -0.94
CHFR-203ENST00000432561 KRTAP10-4P60372 401 aaPredicted RBP9.17□□□□□ -0.94
CHFR-203ENST00000432561 C7orf65Q6ZTY9 151 aa9.15□□□□□ -0.94
CHFR-203ENST00000432561 PMAIP1Q13794 54 aa9.15□□□□□ -0.95
CHFR-203ENST00000432561 Q8N1X5 172 aa9.12□□□□□ -0.95
CHFR-203ENST00000432561 CDC42SE1Q9NRR8 79 aa9.12□□□□□ -0.95
CHFR-203ENST00000432561 LRP1Q07954 4544 aaKnown RBP9.11□□□□□ -0.95
CHFR-203ENST00000432561 RPS29P62273 56 aaKnown RBP9.1□□□□□ -0.95
CHFR-203ENST00000432561 FLG2Q5D862 2391 aaPredicted RBP9.07□□□□□ -0.96
CHFR-203ENST00000432561 A0A1B0GU69 56 aa9.05□□□□□ -0.96
CHFR-203ENST00000432561 ATP11AUNQ6ZP68 121 aa9.05□□□□□ -0.96
CHFR-203ENST00000432561 RYR3Q15413 4870 aa8.99□□□□□ -0.97
CHFR-203ENST00000432561 A8MUU9 505 aa8.98□□□□□ -0.97
CHFR-203ENST00000432561 C20orf166-AS1Q96NR2 134 aa8.98□□□□□ -0.97
CHFR-203ENST00000432561 HSPG2P98160 4391 aa8.97□□□□□ -0.97
CHFR-203ENST00000432561 A6NN06 94 aa8.96□□□□□ -0.97
CHFR-203ENST00000432561 FAT3Q8TDW7 4589 aa8.96□□□□□ -0.98
CHFR-203ENST00000432561 TNXBP22105 4242 aa8.96□□□□□ -0.98
CHFR-203ENST00000432561 DMBT1Q9UGM3 2413 aaPredicted RBP8.96□□□□□ -0.98
CHFR-203ENST00000432561 MYCBP2O75592 4640 aa8.94□□□□□ -0.98
CHFR-203ENST00000432561 KRTAP3-1Q9BYR8 98 aa8.89□□□□□ -0.99
CHFR-203ENST00000432561 KTN1-AS1Q86SY8 53 aa8.86□□□□□ -0.99
CHFR-203ENST00000432561 Q5VSD8 79 aa8.84□□□□□ -0.99
CHFR-203ENST00000432561 KRTAP17-1Q9BYP8 105 aa8.84□□□□□ -0.99
CHFR-203ENST00000432561 KIAA1109Q2LD37 5005 aa8.84□□□□□ -0.99
CHFR-203ENST00000432561 RYR1P21817 5038 aa8.83□□□□□ -1
CHFR-203ENST00000432561 UQCR11O14957 56 aa8.83□□□□□ -1
CHFR-203ENST00000432561 MIR22HGQ0VDD5 57 aa8.83□□□□□ -1
CHFR-203ENST00000432561 SPATA8Q6RVD6 105 aa8.82□□□□□ -1
CHFR-203ENST00000432561 KRTAP10-8P60410 259 aa8.78□□□□□ -1
CHFR-203ENST00000432561 SEC61GP60059 68 aa8.74□□□□□ -1.01
CHFR-203ENST00000432561 ADM2Q7Z4H4 148 aa8.69□□□□□ -1.02
CHFR-203ENST00000432561 COX6B2Q6YFQ2 88 aa8.68□□□□□ -1.02
CHFR-203ENST00000432561 EPPK1P58107 5090 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms