RNA–Protein interactions for RNA: ENST00000431736.6

UBE4A-202, Transcript of ubiquitination factor E4A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE4A, Length 6,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-202ENST00000431736 XP32Q5T750 250 aa2.57□□□□□ -2
UBE4A-202ENST00000431736 SRRM2Q9UQ35 2752 aaKnown RBP2.57□□□□□ -2
UBE4A-202ENST00000431736 IGLV5-48A0A075B6I7 105 aa2.57□□□□□ -2
UBE4A-202ENST00000431736 FAM104AQ969W3 186 aa2.57□□□□□ -2
UBE4A-202ENST00000431736 LINC00310P59036 64 aa2.57□□□□□ -2
UBE4A-202ENST00000431736 A0A1B0GVX0 72 aa2.56□□□□□ -2
UBE4A-202ENST00000431736 TP53AIP1Q9HCN2 124 aa2.56□□□□□ -2
UBE4A-202ENST00000431736 H0Y9P7 68 aa2.56□□□□□ -2
UBE4A-202ENST00000431736 Q75L30 129 aa2.56□□□□□ -2
UBE4A-202ENST00000431736 SERP2Q8N6R1 65 aa2.56□□□□□ -2
UBE4A-202ENST00000431736 C20orf197Q8N268 126 aa2.56□□□□□ -2
UBE4A-202ENST00000431736 UQCRQO14949 82 aa2.55□□□□□ -2
UBE4A-202ENST00000431736 Q5XG85 94 aa2.55□□□□□ -2
UBE4A-202ENST00000431736 C20orf166-AS1Q96NR2 134 aa2.55□□□□□ -2
UBE4A-202ENST00000431736 KRTAP7-1Q8IUC3 87 aa2.55□□□□□ -2
UBE4A-202ENST00000431736 CXCL6P80162 114 aa2.54□□□□□ -2
UBE4A-202ENST00000431736 DNAH10Q8IVF4 4471 aa2.54□□□□□ -2
UBE4A-202ENST00000431736 MRPL34Q9BQ48 92 aaKnown RBP2.53□□□□□ -2
UBE4A-202ENST00000431736 A8MWP4 228 aa2.53□□□□□ -2
UBE4A-202ENST00000431736 ZCCHC13Q8WW36 166 aaKnown RBP2.53□□□□□ -2
UBE4A-202ENST00000431736 RYR3Q15413 4870 aa2.53□□□□□ -2
UBE4A-202ENST00000431736 SACSQ9NZJ4 4579 aa2.53□□□□□ -2
UBE4A-202ENST00000431736 A0A0G2JQZ4 141 aa2.53□□□□□ -2
UBE4A-202ENST00000431736 C1orf64Q8NEQ6 169 aa2.53□□□□□ -2
UBE4A-202ENST00000431736 TMEM254Q8TBM7 123 aa2.52□□□□□ -2.01
UBE4A-202ENST00000431736 C8orf17Q9NRJ1 99 aa2.52□□□□□ -2.01
UBE4A-202ENST00000431736 SMIM26A0A096LP01 95 aa2.52□□□□□ -2.01
UBE4A-202ENST00000431736 KRTAP4-16G5E9R7 235 aaPredicted RBP2.52□□□□□ -2.01
UBE4A-202ENST00000431736 LITAFQ99732 161 aa2.52□□□□□ -2.01
UBE4A-202ENST00000431736 SNURFQ9Y675 71 aa2.52□□□□□ -2.01
UBE4A-202ENST00000431736 CSAG1Q6PB30 78 aa2.51□□□□□ -2.01
UBE4A-202ENST00000431736 FAM218AQ96MZ4 157 aa2.51□□□□□ -2.01
UBE4A-202ENST00000431736 NDUFC1O43677 76 aa2.51□□□□□ -2.01
UBE4A-202ENST00000431736 KRTAP10-10P60014 251 aa2.5□□□□□ -2.01
UBE4A-202ENST00000431736 Q6ZQT0 140 aa2.5□□□□□ -2.01
UBE4A-202ENST00000431736 DYNC1H1Q14204 4646 aaKnown RBP2.5□□□□□ -2.01
UBE4A-202ENST00000431736 HERC2O95714 4834 aa2.5□□□□□ -2.01
UBE4A-202ENST00000431736 SPINK7P58062 85 aa2.5□□□□□ -2.01
UBE4A-202ENST00000431736 TRAV22A0A0B4J277 110 aa2.5□□□□□ -2.01
UBE4A-202ENST00000431736 Q8NDZ9 215 aa2.5□□□□□ -2.01
UBE4A-202ENST00000431736 LOC110117498A0A087WWA1 95 aa2.5□□□□□ -2.01
UBE4A-202ENST00000431736 LOC101927531A0A1B0GV80 90 aa2.5□□□□□ -2.01
UBE4A-202ENST00000431736 KTN1-AS1Q86SY8 53 aa2.5□□□□□ -2.01
UBE4A-202ENST00000431736 DNAH3Q8TD57 4116 aa2.49□□□□□ -2.01
UBE4A-202ENST00000431736 CMYA5Q8N3K9 4069 aa2.49□□□□□ -2.01
UBE4A-202ENST00000431736 ACYP2P14621 99 aa2.49□□□□□ -2.01
UBE4A-202ENST00000431736 STARD9Q9P2P6 4700 aa2.49□□□□□ -2.01
UBE4A-202ENST00000431736 TRAV7A0A075B6U4 112 aa2.49□□□□□ -2.01
UBE4A-202ENST00000431736 DNAH6Q9C0G6 4158 aa2.49□□□□□ -2.01
UBE4A-202ENST00000431736 DNAH5Q8TE73 4624 aa2.49□□□□□ -2.01
UBE4A-202ENST00000431736 VPS13DQ5THJ4 4388 aa2.49□□□□□ -2.01
UBE4A-202ENST00000431736 A0A087WVE0 104 aa2.48□□□□□ -2.01
UBE4A-202ENST00000431736 COX7CP15954 63 aa2.48□□□□□ -2.01
UBE4A-202ENST00000431736 PRR15Q8IV56 129 aa2.48□□□□□ -2.01
UBE4A-202ENST00000431736 KIAA1109Q2LD37 5005 aa2.48□□□□□ -2.01
UBE4A-202ENST00000431736 K7EQZ3 153 aa2.48□□□□□ -2.01
UBE4A-202ENST00000431736 ATP5EP56381 51 aaPredicted RBP2.47□□□□□ -2.01
UBE4A-202ENST00000431736 HRES1P13985 223 aa2.47□□□□□ -2.01
UBE4A-202ENST00000431736 A0A1W2PNM2 257 aa2.47□□□□□ -2.01
UBE4A-202ENST00000431736 A8MUN3 132 aa2.47□□□□□ -2.01
UBE4A-202ENST00000431736 KMT2CQ8NEZ4 4911 aaKnown RBP2.47□□□□□ -2.01
UBE4A-202ENST00000431736 RYR1P21817 5038 aa2.47□□□□□ -2.01
UBE4A-202ENST00000431736 S4R3F8 94 aa2.46□□□□□ -2.01
UBE4A-202ENST00000431736 H3BPC8 53 aa2.46□□□□□ -2.02
UBE4A-202ENST00000431736 LCA10Q71F78 164 aa2.46□□□□□ -2.02
UBE4A-202ENST00000431736 LINC01554Q52M75 96 aa2.45□□□□□ -2.02
UBE4A-202ENST00000431736 MPLKIPQ8TAP9 179 aa2.45□□□□□ -2.02
UBE4A-202ENST00000431736 H1FX-AS1Q4G0G2 97 aa2.45□□□□□ -2.02
UBE4A-202ENST00000431736 FAT2Q9NYQ8 4349 aa2.45□□□□□ -2.02
UBE4A-202ENST00000431736 A6NED7 52 aa2.45□□□□□ -2.02
UBE4A-202ENST00000431736 DNAH17Q9UFH2 4485 aa2.44□□□□□ -2.02
UBE4A-202ENST00000431736 A8MUU9 505 aa2.44□□□□□ -2.02
UBE4A-202ENST00000431736 SMCPP49901 116 aaPredicted RBP2.43□□□□□ -2.02
UBE4A-202ENST00000431736 A0A1B0GU69 56 aa2.43□□□□□ -2.02
UBE4A-202ENST00000431736 PLAC4Q8WY50 150 aa2.43□□□□□ -2.02
UBE4A-202ENST00000431736 LRP1BQ9NZR2 4599 aa2.43□□□□□ -2.02
UBE4A-202ENST00000431736 KRTAP9-6A0A140TA67 174 aa2.42□□□□□ -2.02
UBE4A-202ENST00000431736 EPPK1P58107 5090 aaKnown RBP2.41□□□□□ -2.02
UBE4A-202ENST00000431736 KRTAP9-2Q9BYQ4 174 aa2.41□□□□□ -2.02
UBE4A-202ENST00000431736 DNAH7Q8WXX0 4024 aa2.41□□□□□ -2.02
UBE4A-202ENST00000431736 PCLOQ9Y6V0 5065 aa2.41□□□□□ -2.02
UBE4A-202ENST00000431736 PSPHP1O15172 72 aa2.4□□□□□ -2.02
UBE4A-202ENST00000431736 LINC00472Q9H8W2 130 aa2.39□□□□□ -2.03
UBE4A-202ENST00000431736 PRO0461Q9UI25 63 aa2.39□□□□□ -2.03
UBE4A-202ENST00000431736 CAMK2N1Q7Z7J9 78 aa2.39□□□□□ -2.03
UBE4A-202ENST00000431736 CRCT1Q9UGL9 99 aa2.36□□□□□ -2.03
UBE4A-202ENST00000431736 DNAH2Q9P225 4427 aa2.36□□□□□ -2.03
UBE4A-202ENST00000431736 SPINT4Q6UDR6 99 aa2.36□□□□□ -2.03
UBE4A-202ENST00000431736 PRO2289Q9P1D8 64 aa2.36□□□□□ -2.03
UBE4A-202ENST00000431736 R4GN34 69 aa2.36□□□□□ -2.03
UBE4A-202ENST00000431736 HSPG2P98160 4391 aa2.35□□□□□ -2.03
UBE4A-202ENST00000431736 Q8N9P0 234 aaPredicted RBP2.35□□□□□ -2.03
UBE4A-202ENST00000431736 HYDINQ4G0P3 5121 aa2.34□□□□□ -2.03
UBE4A-202ENST00000431736 A0A0D9SG42 100 aa2.34□□□□□ -2.03
UBE4A-202ENST00000431736 MMP24-AS1A0A0U1RRL7 71 aa2.34□□□□□ -2.04
UBE4A-202ENST00000431736 CYSTM1Q9H1C7 97 aa2.34□□□□□ -2.04
UBE4A-202ENST00000431736 PKHD1L1Q86WI1 4243 aa2.33□□□□□ -2.04
UBE4A-202ENST00000431736 KRTAP16-1A8MUX0 517 aa2.33□□□□□ -2.04
UBE4A-202ENST00000431736 PRAC1Q96KF2 57 aa2.33□□□□□ -2.04
UBE4A-202ENST00000431736 KMT2AQ03164 3969 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms