RNA–Protein interactions for RNA: ENST00000431048.5

PTPRA-207, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 707 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-207ENST00000431048 HIGD1BQ9P298 99 aa10.21□□□□□ -0.77
PTPRA-207ENST00000431048 PRO1854Q9UHT4 67 aa10.21□□□□□ -0.77
PTPRA-207ENST00000431048 A6NN06 94 aa10.2□□□□□ -0.78
PTPRA-207ENST00000431048 DNAL4O96015 105 aa10.2□□□□□ -0.78
PTPRA-207ENST00000431048 S100A2P29034 98 aa10.2□□□□□ -0.78
PTPRA-207ENST00000431048 TRIAP1O43715 76 aa10.19□□□□□ -0.78
PTPRA-207ENST00000431048 MDN1Q9NU22 5596 aa10.16□□□□□ -0.78
PTPRA-207ENST00000431048 UBE2V1Q13404 147 aa10.15□□□□□ -0.78
PTPRA-207ENST00000431048 LYRM7Q5U5X0 104 aa10.15□□□□□ -0.78
PTPRA-207ENST00000431048 KRTAP5-9P26371 169 aa10.13□□□□□ -0.79
PTPRA-207ENST00000431048 NDUFB1O75438 58 aa10.12□□□□□ -0.79
PTPRA-207ENST00000431048 C21orf62-AS1Q17RA5 79 aa10.12□□□□□ -0.79
PTPRA-207ENST00000431048 CEND1Q8N111 149 aa10.11□□□□□ -0.79
PTPRA-207ENST00000431048 C14orf144Q96I85 54 aa10.11□□□□□ -0.79
PTPRA-207ENST00000431048 VPS25Q9BRG1 176 aa10.11□□□□□ -0.79
PTPRA-207ENST00000431048 KMT2DO14686 5537 aa10.11□□□□□ -0.79
PTPRA-207ENST00000431048 TMEM238LA0A1B0GVL6 79 aa10.1□□□□□ -0.79
PTPRA-207ENST00000431048 A6NJY4 79 aa10.1□□□□□ -0.79
PTPRA-207ENST00000431048 DSCR8Q96T75 97 aa10.1□□□□□ -0.79
PTPRA-207ENST00000431048 IGKV3D-7A0A0C4DH55 119 aa10.09□□□□□ -0.79
PTPRA-207ENST00000431048 C8orf17Q9NRJ1 99 aa10.09□□□□□ -0.79
PTPRA-207ENST00000431048 C2orf91Q6ZV80 131 aa10.08□□□□□ -0.8
PTPRA-207ENST00000431048 MT1BP07438 61 aa10.07□□□□□ -0.8
PTPRA-207ENST00000431048 RBM3P98179 157 aaKnown RBP10.06□□□□□ -0.8
PTPRA-207ENST00000431048 Q6ZQT0 140 aa10.04□□□□□ -0.8
PTPRA-207ENST00000431048 FXYD2P54710 66 aa10.03□□□□□ -0.8
PTPRA-207ENST00000431048 Q5VV11 94 aa10.01□□□□□ -0.81
PTPRA-207ENST00000431048 Q6ZVQ6 151 aa10.01□□□□□ -0.81
PTPRA-207ENST00000431048 COX6CP09669 75 aa10□□□□□ -0.81
PTPRA-207ENST00000431048 PSMB2P49721 201 aa10□□□□□ -0.81
PTPRA-207ENST00000431048 KRTAP10-5P60370 271 aa10□□□□□ -0.81
PTPRA-207ENST00000431048 KRTAP19-8Q3LI54 63 aa9.98□□□□□ -0.81
PTPRA-207ENST00000431048 SPATA45Q537H7 98 aa9.97□□□□□ -0.81
PTPRA-207ENST00000431048 S100A6P06703 90 aa9.96□□□□□ -0.82
PTPRA-207ENST00000431048 KRTAP2-3P0C7H8 128 aa9.96□□□□□ -0.82
PTPRA-207ENST00000431048 KRTAP2-4Q9BYR9 128 aa9.96□□□□□ -0.82
PTPRA-207ENST00000431048 PAM16Q9Y3D7 125 aa9.96□□□□□ -0.82
PTPRA-207ENST00000431048 C9JAW5 83 aa9.95□□□□□ -0.82
PTPRA-207ENST00000431048 KRTAP3-3Q9BYR6 98 aa9.94□□□□□ -0.82
PTPRA-207ENST00000431048 KRTAP3-2Q9BYR7 98 aa9.94□□□□□ -0.82
PTPRA-207ENST00000431048 SPRR2GQ9BYE4 73 aa9.92□□□□□ -0.82
PTPRA-207ENST00000431048 A0A1B0GW54 56 aa9.89□□□□□ -0.83
PTPRA-207ENST00000431048 PRR15Q8IV56 129 aa9.89□□□□□ -0.83
PTPRA-207ENST00000431048 TMEM254Q8TBM7 123 aa9.89□□□□□ -0.83
PTPRA-207ENST00000431048 MRPL34Q9BQ48 92 aaKnown RBP9.89□□□□□ -0.83
PTPRA-207ENST00000431048 FAM236AA0A1B0GUQ0 79 aa9.88□□□□□ -0.83
PTPRA-207ENST00000431048 FAM236BA0A1B0GV22 79 aa9.88□□□□□ -0.83
PTPRA-207ENST00000431048 K7ERJ3 54 aa9.86□□□□□ -0.83
PTPRA-207ENST00000431048 VAMP8Q9BV40 100 aa9.86□□□□□ -0.83
PTPRA-207ENST00000431048 MMP24-AS1A0A0U1RRL7 71 aa9.83□□□□□ -0.84
PTPRA-207ENST00000431048 IGKV2D-30A0A075B6S6 120 aa9.82□□□□□ -0.84
PTPRA-207ENST00000431048 IGKV2-30P06310 120 aa9.82□□□□□ -0.84
PTPRA-207ENST00000431048 BAALC-AS2P0C853 105 aa9.82□□□□□ -0.84
PTPRA-207ENST00000431048 C7orf65Q6ZTY9 151 aa9.82□□□□□ -0.84
PTPRA-207ENST00000431048 HSD52Q0P140 79 aa9.8□□□□□ -0.84
PTPRA-207ENST00000431048 C5orf47Q569G3 176 aa9.8□□□□□ -0.84
PTPRA-207ENST00000431048 S100A1P23297 94 aa9.78□□□□□ -0.84
PTPRA-207ENST00000431048 LOC110117498A0A087WWA1 95 aa9.76□□□□□ -0.85
PTPRA-207ENST00000431048 hDV103S1A0JD37 113 aa9.76□□□□□ -0.85
PTPRA-207ENST00000431048 NDUFS5O43920 106 aa9.76□□□□□ -0.85
PTPRA-207ENST00000431048 SCGB1C2P0DMR2 95 aa9.76□□□□□ -0.85
PTPRA-207ENST00000431048 Q5W150 140 aa9.75□□□□□ -0.85
PTPRA-207ENST00000431048 C4orf26Q17RF5 130 aa9.74□□□□□ -0.85
PTPRA-207ENST00000431048 JMJD7-PLA2G4BH0Y9G9 81 aa9.73□□□□□ -0.85
PTPRA-207ENST00000431048 PDE6GP18545 87 aa9.73□□□□□ -0.85
PTPRA-207ENST00000431048 NREPQ16612 68 aa9.7□□□□□ -0.86
PTPRA-207ENST00000431048 CSAG1Q6PB30 78 aa9.7□□□□□ -0.86
PTPRA-207ENST00000431048 KLKP1Q107X0 134 aa9.66□□□□□ -0.86
PTPRA-207ENST00000431048 S4R3F8 94 aa9.65□□□□□ -0.86
PTPRA-207ENST00000431048 K7EQZ3 153 aa9.64□□□□□ -0.87
PTPRA-207ENST00000431048 KRTAP3-1Q9BYR8 98 aa9.63□□□□□ -0.87
PTPRA-207ENST00000431048 SPRR2EP22531 72 aa9.62□□□□□ -0.87
PTPRA-207ENST00000431048 SPRR2BP35325 72 aa9.62□□□□□ -0.87
PTPRA-207ENST00000431048 SPRR2AP35326 72 aa9.62□□□□□ -0.87
PTPRA-207ENST00000431048 IMUPQ9GZP8 106 aa9.61□□□□□ -0.87
PTPRA-207ENST00000431048 SPRR2FQ96RM1 72 aa9.6□□□□□ -0.87
PTPRA-207ENST00000431048 KRTAP2-2Q9BYT5 123 aa9.6□□□□□ -0.87
PTPRA-207ENST00000431048 KRTAP2-1Q9BYU5 128 aa9.6□□□□□ -0.87
PTPRA-207ENST00000431048 SMCPP49901 116 aaPredicted RBP9.59□□□□□ -0.87
PTPRA-207ENST00000431048 LCA10Q71F78 164 aa9.58□□□□□ -0.88
PTPRA-207ENST00000431048 C14orf132Q9NPU4 83 aa9.58□□□□□ -0.88
PTPRA-207ENST00000431048 ATXN8Q156A1 80 aa9.56□□□□□ -0.88
PTPRA-207ENST00000431048 CRIPTQ9P021 101 aa9.52□□□□□ -0.89
PTPRA-207ENST00000431048 HCG22E2RYF7 251 aa9.5□□□□□ -0.89
PTPRA-207ENST00000431048 CXCL6P80162 114 aa9.49□□□□□ -0.89
PTPRA-207ENST00000431048 C1orf64Q8NEQ6 169 aa9.49□□□□□ -0.89
PTPRA-207ENST00000431048 UQCR10Q9UDW1 63 aa9.47□□□□□ -0.89
PTPRA-207ENST00000431048 CASC2Q6XLA1 102 aa9.46□□□□□ -0.9
PTPRA-207ENST00000431048 BPY2O14599 106 aa9.45□□□□□ -0.9
PTPRA-207ENST00000431048 LCE1AQ5T7P2 110 aa9.44□□□□□ -0.9
PTPRA-207ENST00000431048 PYY3Q5JQD4 70 aa9.43□□□□□ -0.9
PTPRA-207ENST00000431048 KRTAP8-1Q8IUC2 63 aa9.36□□□□□ -0.91
PTPRA-207ENST00000431048 Q8N9L7 120 aa9.35□□□□□ -0.91
PTPRA-207ENST00000431048 PRO2289Q9P1D8 64 aa9.34□□□□□ -0.91
PTPRA-207ENST00000431048 NAA38Q9BRA0 125 aaKnown RBP9.33□□□□□ -0.92
PTPRA-207ENST00000431048 SPRR2DP22532 72 aa9.31□□□□□ -0.92
PTPRA-207ENST00000431048 MT1XP80297 61 aa9.27□□□□□ -0.93
PTPRA-207ENST00000431048 KRTAP12-2P59991 146 aa9.23□□□□□ -0.93
PTPRA-207ENST00000431048 M0R143 59 aa9.18□□□□□ -0.94
PTPRA-207ENST00000431048 H0YAA0 97 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms