RNA–Protein interactions for RNA: ENST00000429940.6

LINC00839-202, long intergenic non-protein coding RNA 839, humanhuman

TSL 2 BASIC

Gene LINC00839, Length 2,253 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-202ENST00000429940 LOC101927531A0A1B0GV80 90 aa8.97□□□□□ -0.97
LINC00839-202ENST00000429940 Q75L30 129 aa8.97□□□□□ -0.97
LINC00839-202ENST00000429940 PSORS1C2Q9UIG4 136 aa8.97□□□□□ -0.97
LINC00839-202ENST00000429940 ANAPC11Q9NYG5 84 aa8.97□□□□□ -0.97
LINC00839-202ENST00000429940 IGLV5-52A0A0A0MRZ9 124 aa8.96□□□□□ -0.98
LINC00839-202ENST00000429940 A0A087WTM6 91 aa8.95□□□□□ -0.98
LINC00839-202ENST00000429940 A0A087X002 238 aa8.93□□□□□ -0.98
LINC00839-202ENST00000429940 A6NED7 52 aa8.93□□□□□ -0.98
LINC00839-202ENST00000429940 NOTCH2NLQ7Z3S9 236 aa8.93□□□□□ -0.98
LINC00839-202ENST00000429940 ZNF861PO60384 105 aa8.92□□□□□ -0.98
LINC00839-202ENST00000429940 SPAG11AQ6PDA7 123 aa8.92□□□□□ -0.98
LINC00839-202ENST00000429940 RTL8CO15255 209 aa8.92□□□□□ -0.98
LINC00839-202ENST00000429940 SEC61GP60059 68 aa8.91□□□□□ -0.98
LINC00839-202ENST00000429940 LCA10Q71F78 164 aa8.91□□□□□ -0.98
LINC00839-202ENST00000429940 HRES1P13985 223 aa8.9□□□□□ -0.98
LINC00839-202ENST00000429940 LINC01558Q9Y6Z2 57 aa8.89□□□□□ -0.99
LINC00839-202ENST00000429940 SPTSSBQ8NFR3 76 aa8.89□□□□□ -0.99
LINC00839-202ENST00000429940 PLAC8Q9NZF1 115 aa8.88□□□□□ -0.99
LINC00839-202ENST00000429940 SPINK6Q6UWN8 80 aa8.88□□□□□ -0.99
LINC00839-202ENST00000429940 HECTD4Q9Y4D8 3996 aa8.86□□□□□ -0.99
LINC00839-202ENST00000429940 FRAS1Q86XX4 4008 aa8.86□□□□□ -0.99
LINC00839-202ENST00000429940 KMT2CQ8NEZ4 4911 aaKnown RBP8.86□□□□□ -0.99
LINC00839-202ENST00000429940 ATP11AUNQ6ZP68 121 aa8.85□□□□□ -0.99
LINC00839-202ENST00000429940 ALMS1Q8TCU4 4167 aa8.85□□□□□ -0.99
LINC00839-202ENST00000429940 SACSQ9NZJ4 4579 aa8.84□□□□□ -0.99
LINC00839-202ENST00000429940 DNAH8Q96JB1 4490 aa8.83□□□□□ -1
LINC00839-202ENST00000429940 Q5W150 140 aa8.83□□□□□ -1
LINC00839-202ENST00000429940 CDC42SE1Q9NRR8 79 aa8.83□□□□□ -1
LINC00839-202ENST00000429940 CIRBP-AS1Q8TBR5 109 aa8.82□□□□□ -1
LINC00839-202ENST00000429940 KRTAP13-3Q3SY46 172 aa8.8□□□□□ -1
LINC00839-202ENST00000429940 C1orf134Q5TEV5 83 aa8.8□□□□□ -1
LINC00839-202ENST00000429940 DNAH6Q9C0G6 4158 aa8.8□□□□□ -1
LINC00839-202ENST00000429940 IGLV7-43P04211 117 aa8.79□□□□□ -1
LINC00839-202ENST00000429940 DNAH17Q9UFH2 4485 aa8.78□□□□□ -1
LINC00839-202ENST00000429940 KTN1-AS1Q86SY8 53 aa8.78□□□□□ -1
LINC00839-202ENST00000429940 SPINK7P58062 85 aa8.77□□□□□ -1.01
LINC00839-202ENST00000429940 PRR26Q8N8Z3 221 aa8.76□□□□□ -1.01
LINC00839-202ENST00000429940 FAT2Q9NYQ8 4349 aa8.75□□□□□ -1.01
LINC00839-202ENST00000429940 A6NN06 94 aa8.75□□□□□ -1.01
LINC00839-202ENST00000429940 C8orf87E5RJ46 101 aa8.74□□□□□ -1.01
LINC00839-202ENST00000429940 ACYP2P14621 99 aa8.73□□□□□ -1.01
LINC00839-202ENST00000429940 SSBP3-AS1Q7Z2R9 100 aa8.72□□□□□ -1.01
LINC00839-202ENST00000429940 PKD1P98161 4303 aa8.72□□□□□ -1.01
LINC00839-202ENST00000429940 DNAH11Q96DT5 4516 aa8.71□□□□□ -1.02
LINC00839-202ENST00000429940 RYR2Q92736 4967 aa8.7□□□□□ -1.02
LINC00839-202ENST00000429940 LINC00313P59037 77 aa8.69□□□□□ -1.02
LINC00839-202ENST00000429940 PKHD1P08F94 4074 aa8.68□□□□□ -1.02
LINC00839-202ENST00000429940 KRTAP10-2P60368 255 aa8.68□□□□□ -1.02
LINC00839-202ENST00000429940 DMAC1Q96GE9 116 aa8.67□□□□□ -1.02
LINC00839-202ENST00000429940 DNAH5Q8TE73 4624 aa8.66□□□□□ -1.02
LINC00839-202ENST00000429940 FAM229AH3BQW9 127 aa8.66□□□□□ -1.02
LINC00839-202ENST00000429940 RETNLBQ9BQ08 111 aa8.66□□□□□ -1.02
LINC00839-202ENST00000429940 RYR3Q15413 4870 aa8.65□□□□□ -1.02
LINC00839-202ENST00000429940 IGKV2-30P06310 120 aa8.61□□□□□ -1.03
LINC00839-202ENST00000429940 C7orf65Q6ZTY9 151 aa8.61□□□□□ -1.03
LINC00839-202ENST00000429940 RBM12B-AS1Q9P1G2 102 aa8.61□□□□□ -1.03
LINC00839-202ENST00000429940 KRTAP13-2Q52LG2 175 aa8.6□□□□□ -1.03
LINC00839-202ENST00000429940 LCE2DQ5TA82 110 aaPredicted RBP8.56□□□□□ -1.04
LINC00839-202ENST00000429940 A0A1B0GU69 56 aa8.56□□□□□ -1.04
LINC00839-202ENST00000429940 KRTAP16-1A8MUX0 517 aa8.56□□□□□ -1.04
LINC00839-202ENST00000429940 KRTAP10-1P60331 282 aa8.53□□□□□ -1.04
LINC00839-202ENST00000429940 IGKV2D-30A0A075B6S6 120 aa8.5□□□□□ -1.05
LINC00839-202ENST00000429940 LRP1BQ9NZR2 4599 aa8.48□□□□□ -1.05
LINC00839-202ENST00000429940 A0A1B0GVY2 172 aa8.46□□□□□ -1.05
LINC00839-202ENST00000429940 Q6ZSA8 131 aa8.46□□□□□ -1.05
LINC00839-202ENST00000429940 KRTAP1-4P0C5Y4 121 aa8.46□□□□□ -1.06
LINC00839-202ENST00000429940 SPATA8Q6RVD6 105 aa8.45□□□□□ -1.06
LINC00839-202ENST00000429940 DYNC1H1Q14204 4646 aaKnown RBP8.45□□□□□ -1.06
LINC00839-202ENST00000429940 UQCR11O14957 56 aa8.42□□□□□ -1.06
LINC00839-202ENST00000429940 MIR22HGQ0VDD5 57 aa8.42□□□□□ -1.06
LINC00839-202ENST00000429940 C4orf48Q5BLP8 95 aa8.42□□□□□ -1.06
LINC00839-202ENST00000429940 VPS13BQ7Z7G8 4022 aa8.39□□□□□ -1.07
LINC00839-202ENST00000429940 PLA2G1BP04054 148 aaKnown RBP8.38□□□□□ -1.07
LINC00839-202ENST00000429940 TYMSOSQ8TAI1 123 aa8.38□□□□□ -1.07
LINC00839-202ENST00000429940 PRAC1Q96KF2 57 aa8.37□□□□□ -1.07
LINC00839-202ENST00000429940 SPINK1P00995 79 aa8.36□□□□□ -1.07
LINC00839-202ENST00000429940 EPPK1P58107 5090 aaKnown RBP8.36□□□□□ -1.07
LINC00839-202ENST00000429940 ADM2Q7Z4H4 148 aa8.34□□□□□ -1.07
LINC00839-202ENST00000429940 APOBP04114 4563 aaKnown RBP8.34□□□□□ -1.07
LINC00839-202ENST00000429940 SMR3BP02814 79 aaPredicted RBP8.33□□□□□ -1.08
LINC00839-202ENST00000429940 Q8N1X5 172 aa8.31□□□□□ -1.08
LINC00839-202ENST00000429940 FAT1Q14517 4588 aa8.31□□□□□ -1.08
LINC00839-202ENST00000429940 LINC00304Q8N9R0 145 aa8.26□□□□□ -1.09
LINC00839-202ENST00000429940 KIAA1109Q2LD37 5005 aa8.23□□□□□ -1.09
LINC00839-202ENST00000429940 RPS29P62273 56 aaKnown RBP8.22□□□□□ -1.09
LINC00839-202ENST00000429940 HSPG2P98160 4391 aa8.21□□□□□ -1.1
LINC00839-202ENST00000429940 KRTAP17-1Q9BYP8 105 aa8.17□□□□□ -1.1
LINC00839-202ENST00000429940 C9orf92A6NGG3 77 aa8.15□□□□□ -1.1
LINC00839-202ENST00000429940 RYR1P21817 5038 aa8.15□□□□□ -1.1
LINC00839-202ENST00000429940 LINC01554Q52M75 96 aa8.15□□□□□ -1.1
LINC00839-202ENST00000429940 KRTAP3-3Q9BYR6 98 aa8.14□□□□□ -1.11
LINC00839-202ENST00000429940 KRTAP3-2Q9BYR7 98 aa8.14□□□□□ -1.11
LINC00839-202ENST00000429940 A8MUU9 505 aa8.12□□□□□ -1.11
LINC00839-202ENST00000429940 C20orf166-AS1Q96NR2 134 aa8.12□□□□□ -1.11
LINC00839-202ENST00000429940 KRTAP10-4P60372 401 aaPredicted RBP8.12□□□□□ -1.11
LINC00839-202ENST00000429940 CSAG1Q6PB30 78 aa8.12□□□□□ -1.11
LINC00839-202ENST00000429940 H0YAA0 97 aa8.1□□□□□ -1.11
LINC00839-202ENST00000429940 KRTAP3-1Q9BYR8 98 aa8.09□□□□□ -1.11
LINC00839-202ENST00000429940 A0A1B0GU33 70 aa8.05□□□□□ -1.12
LINC00839-202ENST00000429940 Q5VSD8 79 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms