RNA–Protein interactions for RNA: ENST00000429738.1

MRPL28-203, Transcript of mitochondrial ribosomal protein L28, human

TSL 2 BASIC

Gene MRPL28, Length 310 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL28-203	ENST00000429738	PCP4L1	A6NKN8	68 aa		8.94	□□□□□ -0.98
MRPL28-203	ENST00000429738	TAX1BP3	O14907	124 aa		8.94	□□□□□ -0.98
MRPL28-203	ENST00000429738	RBM3	P98179	157 aa	Known RBP	8.94	□□□□□ -0.98
MRPL28-203	ENST00000429738	IGHV6-1	A0A0B4J1U7	121 aa		8.93	□□□□□ -0.98
MRPL28-203	ENST00000429738	MPLKIP	Q8TAP9	179 aa		8.93	□□□□□ -0.98
MRPL28-203	ENST00000429738	DSCR8	Q96T75	97 aa		8.91	□□□□□ -0.98
MRPL28-203	ENST00000429738	C9orf118	A6NHY6	69 aa		8.9	□□□□□ -0.98
MRPL28-203	ENST00000429738	HRES1	P13985	223 aa		8.9	□□□□□ -0.98
MRPL28-203	ENST00000429738	VPS25	Q9BRG1	176 aa		8.9	□□□□□ -0.98
MRPL28-203	ENST00000429738		A0A1B0GVX0	72 aa		8.89	□□□□□ -0.99
MRPL28-203	ENST00000429738	C8orf87	E5RJ46	101 aa		8.89	□□□□□ -0.99
MRPL28-203	ENST00000429738	BAALC-AS2	P0C853	105 aa		8.88	□□□□□ -0.99
MRPL28-203	ENST00000429738	ATXN8	Q156A1	80 aa		8.87	□□□□□ -0.99
MRPL28-203	ENST00000429738		C9JAW5	83 aa		8.86	□□□□□ -0.99
MRPL28-203	ENST00000429738	C21orf62-AS1	Q17RA5	79 aa		8.86	□□□□□ -0.99
MRPL28-203	ENST00000429738		A0A1W2PPM0	123 aa		8.85	□□□□□ -0.99
MRPL28-203	ENST00000429738	LYRM7	Q5U5X0	104 aa		8.85	□□□□□ -0.99
MRPL28-203	ENST00000429738	KRTAP19-1	Q8IUB9	90 aa		8.85	□□□□□ -0.99
MRPL28-203	ENST00000429738	FAM236D	A0A1B0GTK5	79 aa		8.84	□□□□□ -0.99
MRPL28-203	ENST00000429738	FAM236C	P0DP71	79 aa		8.84	□□□□□ -0.99
MRPL28-203	ENST00000429738	COL5A1-AS1	Q5SY13	56 aa		8.84	□□□□□ -0.99
MRPL28-203	ENST00000429738		Q6ZQT0	140 aa		8.84	□□□□□ -0.99
MRPL28-203	ENST00000429738	RBM12B-AS1	Q9P1G2	102 aa		8.84	□□□□□ -0.99
MRPL28-203	ENST00000429738	SYNE2	Q8WXH0	6885 aa	Known RBP	8.83	□□□□□ -1
MRPL28-203	ENST00000429738		J3KT08	172 aa		8.83	□□□□□ -1
MRPL28-203	ENST00000429738	MT2A	P02795	61 aa		8.83	□□□□□ -1
MRPL28-203	ENST00000429738	MACF1	Q9UPN3	7388 aa	Known RBP	8.82	□□□□□ -1
MRPL28-203	ENST00000429738	LCE2B	O14633	110 aa		8.81	□□□□□ -1
MRPL28-203	ENST00000429738	JMJD7-PLA2G4B	H0Y9G9	81 aa		8.78	□□□□□ -1
MRPL28-203	ENST00000429738	ZCCHC13	Q8WW36	166 aa	Known RBP	8.78	□□□□□ -1
MRPL28-203	ENST00000429738	LOC110117498	A0A087WWA1	95 aa		8.77	□□□□□ -1.01
MRPL28-203	ENST00000429738		A0A1B0GW54	56 aa		8.77	□□□□□ -1.01
MRPL28-203	ENST00000429738		Q8N9P0	234 aa	Predicted RBP	8.77	□□□□□ -1.01
MRPL28-203	ENST00000429738	SPCS1	Q9Y6A9	102 aa		8.76	□□□□□ -1.01
MRPL28-203	ENST00000429738	MT1F	P04733	61 aa		8.75	□□□□□ -1.01
MRPL28-203	ENST00000429738	KRTAP9-3	Q9BYQ3	159 aa		8.75	□□□□□ -1.01
MRPL28-203	ENST00000429738	NDUFB1	O75438	58 aa		8.74	□□□□□ -1.01
MRPL28-203	ENST00000429738	MTURN	Q8N3F0	131 aa		8.74	□□□□□ -1.01
MRPL28-203	ENST00000429738		A8MWP4	228 aa		8.73	□□□□□ -1.01
MRPL28-203	ENST00000429738	PDE6G	P18545	87 aa		8.72	□□□□□ -1.01
MRPL28-203	ENST00000429738	SPINK7	P58062	85 aa		8.72	□□□□□ -1.01
MRPL28-203	ENST00000429738	KRTAP10-10	P60014	251 aa		8.71	□□□□□ -1.02
MRPL28-203	ENST00000429738	C8orf17	Q9NRJ1	99 aa		8.71	□□□□□ -1.02
MRPL28-203	ENST00000429738	IGKV3D-7	A0A0C4DH55	119 aa		8.7	□□□□□ -1.02
MRPL28-203	ENST00000429738	C14orf132	Q9NPU4	83 aa		8.69	□□□□□ -1.02
MRPL28-203	ENST00000429738		H3BT86	120 aa		8.68	□□□□□ -1.02
MRPL28-203	ENST00000429738		K7EP34	96 aa		8.68	□□□□□ -1.02
MRPL28-203	ENST00000429738	SMCP	P49901	116 aa	Predicted RBP	8.65	□□□□□ -1.02
MRPL28-203	ENST00000429738	LINC00846	Q9NV44	126 aa		8.65	□□□□□ -1.02
MRPL28-203	ENST00000429738		Q6ZVQ6	151 aa		8.64	□□□□□ -1.03
MRPL28-203	ENST00000429738	PRR15	Q8IV56	129 aa		8.64	□□□□□ -1.03
MRPL28-203	ENST00000429738	PRO0461	Q9UI25	63 aa		8.63	□□□□□ -1.03
MRPL28-203	ENST00000429738	NREP	Q16612	68 aa		8.61	□□□□□ -1.03
MRPL28-203	ENST00000429738	MMP24-AS1	A0A0U1RRL7	71 aa		8.59	□□□□□ -1.03
MRPL28-203	ENST00000429738	KRTAP19-6	Q3LI70	58 aa		8.59	□□□□□ -1.03
MRPL28-203	ENST00000429738	GTF2H5	Q6ZYL4	71 aa		8.59	□□□□□ -1.03
MRPL28-203	ENST00000429738	WFDC13	Q8IUB5	93 aa		8.59	□□□□□ -1.03
MRPL28-203	ENST00000429738	TMEM254	Q8TBM7	123 aa		8.57	□□□□□ -1.04
MRPL28-203	ENST00000429738	MRPL34	Q9BQ48	92 aa	Known RBP	8.57	□□□□□ -1.04
MRPL28-203	ENST00000429738		K7EQZ3	153 aa		8.53	□□□□□ -1.04
MRPL28-203	ENST00000429738	hDV103S1	A0JD37	113 aa		8.51	□□□□□ -1.05
MRPL28-203	ENST00000429738		F8W1H4	67 aa		8.5	□□□□□ -1.05
MRPL28-203	ENST00000429738	KRTAP6-3	Q3LI67	103 aa		8.49	□□□□□ -1.05
MRPL28-203	ENST00000429738		A0A1B0GV90	55 aa		8.47	□□□□□ -1.05
MRPL28-203	ENST00000429738	BPY2	O14599	106 aa		8.45	□□□□□ -1.06
MRPL28-203	ENST00000429738	ETDB	Q3ZM63	59 aa		8.45	□□□□□ -1.06
MRPL28-203	ENST00000429738	NDUFS5	O43920	106 aa		8.44	□□□□□ -1.06
MRPL28-203	ENST00000429738	H1FX-AS1	Q4G0G2	97 aa		8.42	□□□□□ -1.06
MRPL28-203	ENST00000429738		Q5W150	140 aa		8.42	□□□□□ -1.06
MRPL28-203	ENST00000429738	C7orf65	Q6ZTY9	151 aa		8.38	□□□□□ -1.07
MRPL28-203	ENST00000429738	IGKV2D-30	A0A075B6S6	120 aa		8.37	□□□□□ -1.07
MRPL28-203	ENST00000429738	IGKV2-30	P06310	120 aa		8.37	□□□□□ -1.07
MRPL28-203	ENST00000429738		Q8N9L7	120 aa		8.37	□□□□□ -1.07
MRPL28-203	ENST00000429738	CASC2	Q6XLA1	102 aa		8.35	□□□□□ -1.07
MRPL28-203	ENST00000429738	NEB	P20929	6669 aa		8.35	□□□□□ -1.07
MRPL28-203	ENST00000429738	HCG22	E2RYF7	251 aa		8.33	□□□□□ -1.08
MRPL28-203	ENST00000429738	CXCL6	P80162	114 aa		8.28	□□□□□ -1.08
MRPL28-203	ENST00000429738	UBL5	Q9BZL1	73 aa		8.28	□□□□□ -1.08
MRPL28-203	ENST00000429738	C4orf26	Q17RF5	130 aa		8.25	□□□□□ -1.09
MRPL28-203	ENST00000429738	FAM240A	A0A1B0GVK7	77 aa		8.18	□□□□□ -1.1
MRPL28-203	ENST00000429738	ACYP1	P07311	99 aa		8.18	□□□□□ -1.1
MRPL28-203	ENST00000429738	KRTAP3-1	Q9BYR8	98 aa		8.18	□□□□□ -1.1
MRPL28-203	ENST00000429738	MUC12	Q9UKN1	5478 aa		8.14	□□□□□ -1.11
MRPL28-203	ENST00000429738	C5orf47	Q569G3	176 aa		8.12	□□□□□ -1.11
MRPL28-203	ENST00000429738	TP53AIP1	Q9HCN2	124 aa		8.1	□□□□□ -1.11
MRPL28-203	ENST00000429738		S4R3F8	94 aa		8.09	□□□□□ -1.11
MRPL28-203	ENST00000429738	C1orf64	Q8NEQ6	169 aa		8.08	□□□□□ -1.12
MRPL28-203	ENST00000429738	KRTAP20-1	Q3LI63	56 aa		8.06	□□□□□ -1.12
MRPL28-203	ENST00000429738	LCA10	Q71F78	164 aa		8.06	□□□□□ -1.12
MRPL28-203	ENST00000429738	CSAG1	Q6PB30	78 aa		8.04	□□□□□ -1.12
MRPL28-203	ENST00000429738	FAM236A	A0A1B0GUQ0	79 aa		8.03	□□□□□ -1.12
MRPL28-203	ENST00000429738	FAM236B	A0A1B0GV22	79 aa		8.03	□□□□□ -1.12
MRPL28-203	ENST00000429738		J3QR89	54 aa		8.03	□□□□□ -1.12
MRPL28-203	ENST00000429738	ATP5EP2	Q5VTU8	51 aa		8.03	□□□□□ -1.12
MRPL28-203	ENST00000429738	LINC00643	Q86TS7	51 aa		8.03	□□□□□ -1.12
MRPL28-203	ENST00000429738		A6NN06	94 aa		8.01	□□□□□ -1.13
MRPL28-203	ENST00000429738	MT1B	P07438	61 aa		8	□□□□□ -1.13
MRPL28-203	ENST00000429738	SPRR2G	Q9BYE4	73 aa		7.99	□□□□□ -1.13
MRPL28-203	ENST00000429738	HIST1H4A	P62805	103 aa	Known RBP	7.97	□□□□□ -1.13
MRPL28-203	ENST00000429738	KRTAP19-8	Q3LI54	63 aa		7.97	□□□□□ -1.13

Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms