RNA–Protein interactions for RNA: ENST00000429162.2

CASC4-203, Transcript of cancer susceptibility 4, humanhuman

TSL 2

Gene CASC4, Length 1,918 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-203ENST00000429162 H0Y9P7 68 aa11.5□□□□□ -0.57
CASC4-203ENST00000429162 KMT2CQ8NEZ4 4911 aaKnown RBP11.5□□□□□ -0.57
CASC4-203ENST00000429162 VPS13BQ7Z7G8 4022 aa11.49□□□□□ -0.57
CASC4-203ENST00000429162 H3BPC8 53 aa11.49□□□□□ -0.57
CASC4-203ENST00000429162 PLA2G1BP04054 148 aaKnown RBP11.48□□□□□ -0.57
CASC4-203ENST00000429162 TP53AIP1Q9HCN2 124 aa11.48□□□□□ -0.57
CASC4-203ENST00000429162 SERP1Q9Y6X1 66 aa11.48□□□□□ -0.57
CASC4-203ENST00000429162 RYR2Q92736 4967 aa11.47□□□□□ -0.57
CASC4-203ENST00000429162 LIMD2Q9BT23 127 aa11.47□□□□□ -0.57
CASC4-203ENST00000429162 MRPL34Q9BQ48 92 aaKnown RBP11.46□□□□□ -0.58
CASC4-203ENST00000429162 LINC00208Q96KT6 92 aa11.45□□□□□ -0.58
CASC4-203ENST00000429162 TRAV22A0A0B4J277 110 aa11.45□□□□□ -0.58
CASC4-203ENST00000429162 TYMSOSQ8TAI1 123 aa11.44□□□□□ -0.58
CASC4-203ENST00000429162 C8orf87E5RJ46 101 aa11.43□□□□□ -0.58
CASC4-203ENST00000429162 OXTP01178 125 aa11.42□□□□□ -0.58
CASC4-203ENST00000429162 SMR3BP02814 79 aaPredicted RBP11.42□□□□□ -0.58
CASC4-203ENST00000429162 C4orf48Q5BLP8 95 aa11.41□□□□□ -0.58
CASC4-203ENST00000429162 NOTCH2NLQ7Z3S9 236 aa11.41□□□□□ -0.58
CASC4-203ENST00000429162 NDUFS5O43920 106 aa11.41□□□□□ -0.58
CASC4-203ENST00000429162 C1orf195Q5TG92 126 aa11.4□□□□□ -0.58
CASC4-203ENST00000429162 APOBP04114 4563 aaKnown RBP11.37□□□□□ -0.59
CASC4-203ENST00000429162 C1orf64Q8NEQ6 169 aa11.37□□□□□ -0.59
CASC4-203ENST00000429162 SPINK1P00995 79 aa11.36□□□□□ -0.59
CASC4-203ENST00000429162 PRR26Q8N8Z3 221 aa11.33□□□□□ -0.6
CASC4-203ENST00000429162 RYR3Q15413 4870 aa11.33□□□□□ -0.6
CASC4-203ENST00000429162 KRTAP10-4P60372 401 aaPredicted RBP11.32□□□□□ -0.6
CASC4-203ENST00000429162 LINC00313P59037 77 aa11.31□□□□□ -0.6
CASC4-203ENST00000429162 LINC00304Q8N9R0 145 aa11.31□□□□□ -0.6
CASC4-203ENST00000429162 RPS29P62273 56 aaKnown RBP11.29□□□□□ -0.6
CASC4-203ENST00000429162 SPAG11AQ6PDA7 123 aa11.29□□□□□ -0.6
CASC4-203ENST00000429162 CYP4F30PQ9H0H9 118 aa11.27□□□□□ -0.6
CASC4-203ENST00000429162 SPANXA2-OT1Q8N9U9 137 aa11.27□□□□□ -0.61
CASC4-203ENST00000429162 SMIM26A0A096LP01 95 aa11.23□□□□□ -0.61
CASC4-203ENST00000429162 PRR4Q16378 134 aa11.21□□□□□ -0.62
CASC4-203ENST00000429162 FAT1Q14517 4588 aa11.21□□□□□ -0.62
CASC4-203ENST00000429162 Q8N9P0 234 aaPredicted RBP11.2□□□□□ -0.62
CASC4-203ENST00000429162 LOC101927531A0A1B0GV80 90 aa11.18□□□□□ -0.62
CASC4-203ENST00000429162 KRTAP13-3Q3SY46 172 aa11.18□□□□□ -0.62
CASC4-203ENST00000429162 KRTAP16-1A8MUX0 517 aa11.17□□□□□ -0.62
CASC4-203ENST00000429162 Q5W150 140 aa11.16□□□□□ -0.62
CASC4-203ENST00000429162 FAM229AH3BQW9 127 aa11.15□□□□□ -0.62
CASC4-203ENST00000429162 PCOTHQ58A44 107 aa11.15□□□□□ -0.62
CASC4-203ENST00000429162 IGLV7-46A0A075B6I9 117 aa11.13□□□□□ -0.63
CASC4-203ENST00000429162 PKHD1L1Q86WI1 4243 aa11.11□□□□□ -0.63
CASC4-203ENST00000429162 FP248Q71RG6 208 aaPredicted RBP11.11□□□□□ -0.63
CASC4-203ENST00000429162 Q5VSD8 79 aa11.04□□□□□ -0.64
CASC4-203ENST00000429162 C4orf26Q17RF5 130 aa11.03□□□□□ -0.64
CASC4-203ENST00000429162 RETNLBQ9BQ08 111 aa11.01□□□□□ -0.65
CASC4-203ENST00000429162 IGKV2-30P06310 120 aa10.99□□□□□ -0.65
CASC4-203ENST00000429162 MPLKIPQ8TAP9 179 aa10.97□□□□□ -0.65
CASC4-203ENST00000429162 HSPG2P98160 4391 aa10.97□□□□□ -0.65
CASC4-203ENST00000429162 COA5Q86WW8 74 aa10.96□□□□□ -0.66
CASC4-203ENST00000429162 EPPK1P58107 5090 aaKnown RBP10.95□□□□□ -0.66
CASC4-203ENST00000429162 Q1T7F1 81 aa10.9□□□□□ -0.66
CASC4-203ENST00000429162 RYR1P21817 5038 aa10.9□□□□□ -0.67
CASC4-203ENST00000429162 HRES1P13985 223 aa10.9□□□□□ -0.67
CASC4-203ENST00000429162 KRTAP10-8P60410 259 aa10.9□□□□□ -0.67
CASC4-203ENST00000429162 C9orf92A6NGG3 77 aa10.88□□□□□ -0.67
CASC4-203ENST00000429162 Q8N1X5 172 aa10.88□□□□□ -0.67
CASC4-203ENST00000429162 IGKV2D-30A0A075B6S6 120 aa10.87□□□□□ -0.67
CASC4-203ENST00000429162 C20orf166-AS1Q96NR2 134 aa10.86□□□□□ -0.67
CASC4-203ENST00000429162 V9GYY9 64 aa10.86□□□□□ -0.67
CASC4-203ENST00000429162 A8MUU9 505 aa10.84□□□□□ -0.67
CASC4-203ENST00000429162 DMAC1Q96GE9 116 aa10.82□□□□□ -0.68
CASC4-203ENST00000429162 TNXBP22105 4242 aa10.81□□□□□ -0.68
CASC4-203ENST00000429162 ACYP2P14621 99 aa10.8□□□□□ -0.68
CASC4-203ENST00000429162 C7orf65Q6ZTY9 151 aa10.8□□□□□ -0.68
CASC4-203ENST00000429162 FLG2Q5D862 2391 aaPredicted RBP10.78□□□□□ -0.68
CASC4-203ENST00000429162 KRTAP17-1Q9BYP8 105 aa10.76□□□□□ -0.69
CASC4-203ENST00000429162 LRP1Q07954 4544 aaKnown RBP10.76□□□□□ -0.69
CASC4-203ENST00000429162 FAT3Q8TDW7 4589 aa10.76□□□□□ -0.69
CASC4-203ENST00000429162 PSPHP1O15172 72 aa10.7□□□□□ -0.7
CASC4-203ENST00000429162 Q75L30 129 aa10.7□□□□□ -0.7
CASC4-203ENST00000429162 KIAA1109Q2LD37 5005 aa10.69□□□□□ -0.7
CASC4-203ENST00000429162 CHKB-CPT1BH3BT56 60 aa10.67□□□□□ -0.7
CASC4-203ENST00000429162 A8MUN3 132 aa10.66□□□□□ -0.7
CASC4-203ENST00000429162 MT1HL1P0DM35 61 aa10.64□□□□□ -0.71
CASC4-203ENST00000429162 PRR15LQ9BU68 103 aa10.64□□□□□ -0.71
CASC4-203ENST00000429162 BIRC6Q9NR09 4857 aa10.63□□□□□ -0.71
CASC4-203ENST00000429162 LINC01558Q9Y6Z2 57 aa10.62□□□□□ -0.71
CASC4-203ENST00000429162 PRO0628Q9UI54 55 aa10.61□□□□□ -0.71
CASC4-203ENST00000429162 Q5VV11 94 aa10.6□□□□□ -0.71
CASC4-203ENST00000429162 BRK1Q8WUW1 75 aa10.57□□□□□ -0.72
CASC4-203ENST00000429162 SPINK7P58062 85 aa10.55□□□□□ -0.72
CASC4-203ENST00000429162 ATP11AUNQ6ZP68 121 aa10.52□□□□□ -0.72
CASC4-203ENST00000429162 RPL37P61927 97 aaKnown RBP10.52□□□□□ -0.73
CASC4-203ENST00000429162 XP32Q5T750 250 aa10.5□□□□□ -0.73
CASC4-203ENST00000429162 MYCBP2O75592 4640 aa10.49□□□□□ -0.73
CASC4-203ENST00000429162 DMBT1Q9UGM3 2413 aaPredicted RBP10.45□□□□□ -0.74
CASC4-203ENST00000429162 HERC2O95714 4834 aa10.4□□□□□ -0.75
CASC4-203ENST00000429162 A6NED7 52 aa10.39□□□□□ -0.75
CASC4-203ENST00000429162 KRTAP4-5Q9BYR2 181 aa10.39□□□□□ -0.75
CASC4-203ENST00000429162 COX6B2Q6YFQ2 88 aa10.37□□□□□ -0.75
CASC4-203ENST00000429162 SPTSSBQ8NFR3 76 aa10.37□□□□□ -0.75
CASC4-203ENST00000429162 KRTAP3-1Q9BYR8 98 aa10.37□□□□□ -0.75
CASC4-203ENST00000429162 A0A1B0GU69 56 aa10.35□□□□□ -0.75
CASC4-203ENST00000429162 TPRXLQ17RH7 258 aa10.35□□□□□ -0.75
CASC4-203ENST00000429162 ABCA13Q86UQ4 5058 aa10.26□□□□□ -0.77
CASC4-203ENST00000429162 CDC42SE1Q9NRR8 79 aa10.25□□□□□ -0.77
CASC4-203ENST00000429162 LCA10Q71F78 164 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms