RNA–Protein interactions for RNA: ENST00000428555.1

TRIM39-208, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-208ENST00000428555 NDUFS5O43920 106 aa5□□□□□ -1.61
TRIM39-208ENST00000428555 COX6CP09669 75 aa5□□□□□ -1.61
TRIM39-208ENST00000428555 Q96NJ1 140 aa5□□□□□ -1.61
TRIM39-208ENST00000428555 DNAL4O96015 105 aa4.99□□□□□ -1.61
TRIM39-208ENST00000428555 MT1HP80294 61 aa4.99□□□□□ -1.61
TRIM39-208ENST00000428555 LYRM7Q5U5X0 104 aa4.99□□□□□ -1.61
TRIM39-208ENST00000428555 NOTCH2NLQ7Z3S9 236 aa4.99□□□□□ -1.61
TRIM39-208ENST00000428555 ORMDL1Q9P0S3 153 aa4.99□□□□□ -1.61
TRIM39-208ENST00000428555 ATP11AUNQ6ZP68 121 aa4.98□□□□□ -1.61
TRIM39-208ENST00000428555 RBM12B-AS1Q9P1G2 102 aa4.98□□□□□ -1.61
TRIM39-208ENST00000428555 H3BQ85 93 aa4.97□□□□□ -1.61
TRIM39-208ENST00000428555 TMEM256-PLSCR3K7ERE1 68 aa4.97□□□□□ -1.61
TRIM39-208ENST00000428555 SCGB1C2P0DMR2 95 aa4.97□□□□□ -1.61
TRIM39-208ENST00000428555 TRBV7-4A0A0J9YYF1 115 aa4.95□□□□□ -1.62
TRIM39-208ENST00000428555 DSCR10P59022 87 aa4.95□□□□□ -1.62
TRIM39-208ENST00000428555 COX6B2Q6YFQ2 88 aa4.95□□□□□ -1.62
TRIM39-208ENST00000428555 TRACP01848 142 aa4.94□□□□□ -1.62
TRIM39-208ENST00000428555 PRR15Q8IV56 129 aa4.94□□□□□ -1.62
TRIM39-208ENST00000428555 A8MUU9 505 aa4.93□□□□□ -1.62
TRIM39-208ENST00000428555 CCKP06307 115 aa4.93□□□□□ -1.62
TRIM39-208ENST00000428555 DEFB116Q30KQ4 102 aa4.93□□□□□ -1.62
TRIM39-208ENST00000428555 C20orf166-AS1Q96NR2 134 aa4.93□□□□□ -1.62
TRIM39-208ENST00000428555 IMUPQ9GZP8 106 aa4.93□□□□□ -1.62
TRIM39-208ENST00000428555 FLGP20930 4061 aaPredicted RBP4.92□□□□□ -1.62
TRIM39-208ENST00000428555 CCDC179H3BU77 68 aa4.92□□□□□ -1.62
TRIM39-208ENST00000428555 PSPHP1O15172 72 aa4.92□□□□□ -1.62
TRIM39-208ENST00000428555 IGKV4-1P06312 121 aa4.92□□□□□ -1.62
TRIM39-208ENST00000428555 BAALC-AS2P0C853 105 aa4.92□□□□□ -1.62
TRIM39-208ENST00000428555 NAA38Q9BRA0 125 aaKnown RBP4.92□□□□□ -1.62
TRIM39-208ENST00000428555 M0R2T5 61 aa4.91□□□□□ -1.62
TRIM39-208ENST00000428555 LINC00313P59037 77 aa4.91□□□□□ -1.62
TRIM39-208ENST00000428555 LINC00472Q9H8W2 130 aa4.91□□□□□ -1.62
TRIM39-208ENST00000428555 RBM3P98179 157 aaKnown RBP4.9□□□□□ -1.63
TRIM39-208ENST00000428555 KRTAP9-6A0A140TA67 174 aa4.89□□□□□ -1.63
TRIM39-208ENST00000428555 KRTAP10-6P60371 365 aaPredicted RBP4.89□□□□□ -1.63
TRIM39-208ENST00000428555 TMEM258P61165 79 aa4.89□□□□□ -1.63
TRIM39-208ENST00000428555 MP68P56378 58 aa4.88□□□□□ -1.63
TRIM39-208ENST00000428555 KTN1-AS1Q86SY8 53 aa4.88□□□□□ -1.63
TRIM39-208ENST00000428555 DSCR8Q96T75 97 aa4.88□□□□□ -1.63
TRIM39-208ENST00000428555 IGHV6-1A0A0B4J1U7 121 aa4.87□□□□□ -1.63
TRIM39-208ENST00000428555 KRTAP16-1A8MUX0 517 aa4.87□□□□□ -1.63
TRIM39-208ENST00000428555 FSIP2Q5CZC0 6907 aa4.87□□□□□ -1.63
TRIM39-208ENST00000428555 FAM236AA0A1B0GUQ0 79 aa4.85□□□□□ -1.63
TRIM39-208ENST00000428555 FAM236BA0A1B0GV22 79 aa4.85□□□□□ -1.63
TRIM39-208ENST00000428555 ATXN8Q156A1 80 aa4.85□□□□□ -1.63
TRIM39-208ENST00000428555 SMIM26A0A096LP01 95 aa4.84□□□□□ -1.63
TRIM39-208ENST00000428555 TRBV20-1A0A075B6N2 111 aa4.83□□□□□ -1.64
TRIM39-208ENST00000428555 KRTAP23-1A1A580 65 aa4.83□□□□□ -1.64
TRIM39-208ENST00000428555 Q6ZQT0 140 aa4.83□□□□□ -1.64
TRIM39-208ENST00000428555 A0A1B0GVX0 72 aa4.82□□□□□ -1.64
TRIM39-208ENST00000428555 BRK1Q8WUW1 75 aa4.82□□□□□ -1.64
TRIM39-208ENST00000428555 A8MUN3 132 aa4.81□□□□□ -1.64
TRIM39-208ENST00000428555 JMJD7-PLA2G4BH0Y9G9 81 aa4.81□□□□□ -1.64
TRIM39-208ENST00000428555 UQCRQO14949 82 aa4.81□□□□□ -1.64
TRIM39-208ENST00000428555 LOC110117498A0A087WWA1 95 aa4.8□□□□□ -1.64
TRIM39-208ENST00000428555 CRCT1Q9UGL9 99 aa4.8□□□□□ -1.64
TRIM39-208ENST00000428555 TAX1BP3O14907 124 aa4.79□□□□□ -1.64
TRIM39-208ENST00000428555 C14orf132Q9NPU4 83 aa4.79□□□□□ -1.64
TRIM39-208ENST00000428555 K7EP34 96 aa4.78□□□□□ -1.64
TRIM39-208ENST00000428555 PDE6GP18545 87 aa4.78□□□□□ -1.64
TRIM39-208ENST00000428555 LCA10Q71F78 164 aa4.78□□□□□ -1.64
TRIM39-208ENST00000428555 A0A1B0GW54 56 aa4.77□□□□□ -1.65
TRIM39-208ENST00000428555 NDUFB1O75438 58 aa4.77□□□□□ -1.65
TRIM39-208ENST00000428555 HRES1P13985 223 aa4.77□□□□□ -1.65
TRIM39-208ENST00000428555 MPLKIPQ8TAP9 179 aa4.76□□□□□ -1.65
TRIM39-208ENST00000428555 IGKV3D-7A0A0C4DH55 119 aa4.75□□□□□ -1.65
TRIM39-208ENST00000428555 A8MWP4 228 aa4.75□□□□□ -1.65
TRIM39-208ENST00000428555 MT-ATP8P03928 68 aa4.75□□□□□ -1.65
TRIM39-208ENST00000428555 ZCCHC13Q8WW36 166 aaKnown RBP4.75□□□□□ -1.65
TRIM39-208ENST00000428555 NREPQ16612 68 aa4.74□□□□□ -1.65
TRIM39-208ENST00000428555 Q8N9P0 234 aaPredicted RBP4.74□□□□□ -1.65
TRIM39-208ENST00000428555 KRTAP9-8Q9BYQ0 159 aa4.74□□□□□ -1.65
TRIM39-208ENST00000428555 C8orf17Q9NRJ1 99 aa4.74□□□□□ -1.65
TRIM39-208ENST00000428555 F8W1H4 67 aa4.73□□□□□ -1.65
TRIM39-208ENST00000428555 A0A1W2PPM0 123 aa4.72□□□□□ -1.65
TRIM39-208ENST00000428555 SPINK7P58062 85 aa4.72□□□□□ -1.65
TRIM39-208ENST00000428555 SERP1Q9Y6X1 66 aa4.72□□□□□ -1.65
TRIM39-208ENST00000428555 H3BT86 120 aa4.7□□□□□ -1.66
TRIM39-208ENST00000428555 USH2AO75445 5202 aa4.68□□□□□ -1.66
TRIM39-208ENST00000428555 LOC100996750A0A140TA64 210 aa4.67□□□□□ -1.66
TRIM39-208ENST00000428555 KRTAP4-6Q9BYQ5 205 aa4.67□□□□□ -1.66
TRIM39-208ENST00000428555 MMP24-AS1A0A0U1RRL7 71 aa4.66□□□□□ -1.66
TRIM39-208ENST00000428555 K7EQZ3 153 aa4.66□□□□□ -1.66
TRIM39-208ENST00000428555 MT2AP02795 61 aa4.66□□□□□ -1.66
TRIM39-208ENST00000428555 CXCL6P80162 114 aa4.66□□□□□ -1.66
TRIM39-208ENST00000428555 KRTAP19-4Q3LI73 84 aa4.66□□□□□ -1.66
TRIM39-208ENST00000428555 TMEM254Q8TBM7 123 aa4.66□□□□□ -1.66
TRIM39-208ENST00000428555 MRPL34Q9BQ48 92 aaKnown RBP4.66□□□□□ -1.66
TRIM39-208ENST00000428555 SPCS1Q9Y6A9 102 aa4.66□□□□□ -1.66
TRIM39-208ENST00000428555 COX7CP15954 63 aa4.65□□□□□ -1.67
TRIM39-208ENST00000428555 hDV103S1A0JD37 113 aa4.64□□□□□ -1.67
TRIM39-208ENST00000428555 BPY2O14599 106 aa4.64□□□□□ -1.67
TRIM39-208ENST00000428555 SSPOA2VEC9 5147 aa4.63□□□□□ -1.67
TRIM39-208ENST00000428555 LINC01554Q52M75 96 aa4.63□□□□□ -1.67
TRIM39-208ENST00000428555 C7orf65Q6ZTY9 151 aa4.63□□□□□ -1.67
TRIM39-208ENST00000428555 WFDC13Q8IUB5 93 aa4.63□□□□□ -1.67
TRIM39-208ENST00000428555 MT1FP04733 61 aa4.62□□□□□ -1.67
TRIM39-208ENST00000428555 KRTAP10-10P60014 251 aa4.62□□□□□ -1.67
TRIM39-208ENST00000428555 OCR1Q9BZK8 76 aa4.62□□□□□ -1.67
TRIM39-208ENST00000428555 Q8N9L7 120 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms