RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 C8orf17Q9NRJ1 99 aa6.04□□□□□ -1.44
HDAC9-210ENST00000428307 FAM236DA0A1B0GTK5 79 aa6.03□□□□□ -1.44
HDAC9-210ENST00000428307 NDUFC1O43677 76 aa6.03□□□□□ -1.44
HDAC9-210ENST00000428307 FAM236CP0DP71 79 aa6.03□□□□□ -1.44
HDAC9-210ENST00000428307 TYMSOSQ8TAI1 123 aa6.02□□□□□ -1.45
HDAC9-210ENST00000428307 FAT1Q14517 4588 aa6.01□□□□□ -1.45
HDAC9-210ENST00000428307 MP68P56378 58 aa6.01□□□□□ -1.45
HDAC9-210ENST00000428307 LINC00208Q96KT6 92 aa6.01□□□□□ -1.45
HDAC9-210ENST00000428307 NDUFS5O43920 106 aa6□□□□□ -1.45
HDAC9-210ENST00000428307 PRR26Q8N8Z3 221 aa6□□□□□ -1.45
HDAC9-210ENST00000428307 ASB16-AS1Q495Z4 193 aa6□□□□□ -1.45
HDAC9-210ENST00000428307 H0Y9P7 68 aa5.99□□□□□ -1.45
HDAC9-210ENST00000428307 ZCCHC13Q8WW36 166 aaKnown RBP5.99□□□□□ -1.45
HDAC9-210ENST00000428307 C1orf195Q5TG92 126 aa5.99□□□□□ -1.45
HDAC9-210ENST00000428307 MRPL34Q9BQ48 92 aaKnown RBP5.98□□□□□ -1.45
HDAC9-210ENST00000428307 APOBP04114 4563 aaKnown RBP5.97□□□□□ -1.45
HDAC9-210ENST00000428307 RPS28P62857 69 aaKnown RBP5.97□□□□□ -1.45
HDAC9-210ENST00000428307 OXTP01178 125 aa5.96□□□□□ -1.45
HDAC9-210ENST00000428307 KRTAP10-4P60372 401 aaPredicted RBP5.96□□□□□ -1.46
HDAC9-210ENST00000428307 Q5XG85 94 aa5.96□□□□□ -1.46
HDAC9-210ENST00000428307 TRAV22A0A0B4J277 110 aa5.95□□□□□ -1.46
HDAC9-210ENST00000428307 C1orf64Q8NEQ6 169 aa5.95□□□□□ -1.46
HDAC9-210ENST00000428307 LIMD2Q9BT23 127 aa5.95□□□□□ -1.46
HDAC9-210ENST00000428307 TP53AIP1Q9HCN2 124 aa5.94□□□□□ -1.46
HDAC9-210ENST00000428307 SPINK1P00995 79 aa5.94□□□□□ -1.46
HDAC9-210ENST00000428307 RYR3Q15413 4870 aa5.93□□□□□ -1.46
HDAC9-210ENST00000428307 LINC00313P59037 77 aa5.93□□□□□ -1.46
HDAC9-210ENST00000428307 PRR4Q16378 134 aa5.93□□□□□ -1.46
HDAC9-210ENST00000428307 LINC00304Q8N9R0 145 aa5.93□□□□□ -1.46
HDAC9-210ENST00000428307 SERP1Q9Y6X1 66 aa5.92□□□□□ -1.46
HDAC9-210ENST00000428307 ATP5EP56381 51 aaPredicted RBP5.91□□□□□ -1.46
HDAC9-210ENST00000428307 H3BPC8 53 aa5.91□□□□□ -1.46
HDAC9-210ENST00000428307 C8orf87E5RJ46 101 aa5.9□□□□□ -1.46
HDAC9-210ENST00000428307 Q5W150 140 aa5.89□□□□□ -1.47
HDAC9-210ENST00000428307 PCOTHQ58A44 107 aa5.88□□□□□ -1.47
HDAC9-210ENST00000428307 LOC100996750A0A140TA64 210 aa5.87□□□□□ -1.47
HDAC9-210ENST00000428307 FAM229AH3BQW9 127 aa5.87□□□□□ -1.47
HDAC9-210ENST00000428307 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
HDAC9-210ENST00000428307 SPAG11AQ6PDA7 123 aa5.86□□□□□ -1.47
HDAC9-210ENST00000428307 RETNLBQ9BQ08 111 aa5.86□□□□□ -1.47
HDAC9-210ENST00000428307 KRTAP16-1A8MUX0 517 aa5.84□□□□□ -1.48
HDAC9-210ENST00000428307 Q8N9P0 234 aaPredicted RBP5.84□□□□□ -1.48
HDAC9-210ENST00000428307 RPS29P62273 56 aaKnown RBP5.83□□□□□ -1.48
HDAC9-210ENST00000428307 Q5VSD8 79 aa5.83□□□□□ -1.48
HDAC9-210ENST00000428307 KRTAP13-3Q3SY46 172 aa5.82□□□□□ -1.48
HDAC9-210ENST00000428307 HSPG2P98160 4391 aa5.81□□□□□ -1.48
HDAC9-210ENST00000428307 SPANXA2-OT1Q8N9U9 137 aa5.81□□□□□ -1.48
HDAC9-210ENST00000428307 CYP4F30PQ9H0H9 118 aa5.81□□□□□ -1.48
HDAC9-210ENST00000428307 LRP1Q07954 4544 aaKnown RBP5.8□□□□□ -1.48
HDAC9-210ENST00000428307 SMIM26A0A096LP01 95 aa5.8□□□□□ -1.48
HDAC9-210ENST00000428307 FP248Q71RG6 208 aaPredicted RBP5.79□□□□□ -1.48
HDAC9-210ENST00000428307 KRTAP17-1Q9BYP8 105 aa5.79□□□□□ -1.48
HDAC9-210ENST00000428307 LOC101927531A0A1B0GV80 90 aa5.79□□□□□ -1.48
HDAC9-210ENST00000428307 FLG2Q5D862 2391 aaPredicted RBP5.78□□□□□ -1.48
HDAC9-210ENST00000428307 KIAA1109Q2LD37 5005 aa5.78□□□□□ -1.48
HDAC9-210ENST00000428307 IGLV7-46A0A075B6I9 117 aa5.78□□□□□ -1.48
HDAC9-210ENST00000428307 C4orf26Q17RF5 130 aa5.78□□□□□ -1.48
HDAC9-210ENST00000428307 C9orf92A6NGG3 77 aa5.77□□□□□ -1.49
HDAC9-210ENST00000428307 Q8N1X5 172 aa5.77□□□□□ -1.49
HDAC9-210ENST00000428307 PKHD1L1Q86WI1 4243 aa5.77□□□□□ -1.49
HDAC9-210ENST00000428307 MPLKIPQ8TAP9 179 aa5.77□□□□□ -1.49
HDAC9-210ENST00000428307 RYR1P21817 5038 aa5.76□□□□□ -1.49
HDAC9-210ENST00000428307 DMBT1Q9UGM3 2413 aaPredicted RBP5.74□□□□□ -1.49
HDAC9-210ENST00000428307 EPPK1P58107 5090 aaKnown RBP5.74□□□□□ -1.49
HDAC9-210ENST00000428307 IGKV2D-30A0A075B6S6 120 aa5.73□□□□□ -1.49
HDAC9-210ENST00000428307 IGKV2-30P06310 120 aa5.73□□□□□ -1.49
HDAC9-210ENST00000428307 KRTAP10-8P60410 259 aa5.73□□□□□ -1.49
HDAC9-210ENST00000428307 SEC61GP60059 68 aa5.72□□□□□ -1.49
HDAC9-210ENST00000428307 HRES1P13985 223 aa5.71□□□□□ -1.5
HDAC9-210ENST00000428307 LCE2AQ5TA79 106 aaPredicted RBP5.71□□□□□ -1.5
HDAC9-210ENST00000428307 COA5Q86WW8 74 aa5.71□□□□□ -1.5
HDAC9-210ENST00000428307 TNXBP22105 4242 aa5.7□□□□□ -1.5
HDAC9-210ENST00000428307 MYCBP2O75592 4640 aa5.7□□□□□ -1.5
HDAC9-210ENST00000428307 A8MUU9 505 aa5.65□□□□□ -1.51
HDAC9-210ENST00000428307 C20orf166-AS1Q96NR2 134 aa5.65□□□□□ -1.51
HDAC9-210ENST00000428307 Q1T7F1 81 aa5.63□□□□□ -1.51
HDAC9-210ENST00000428307 PSPHP1O15172 72 aa5.63□□□□□ -1.51
HDAC9-210ENST00000428307 FAT3Q8TDW7 4589 aa5.63□□□□□ -1.51
HDAC9-210ENST00000428307 MT1HL1P0DM35 61 aa5.62□□□□□ -1.51
HDAC9-210ENST00000428307 ACYP2P14621 99 aa5.62□□□□□ -1.51
HDAC9-210ENST00000428307 C7orf65Q6ZTY9 151 aa5.62□□□□□ -1.51
HDAC9-210ENST00000428307 DMAC1Q96GE9 116 aa5.61□□□□□ -1.51
HDAC9-210ENST00000428307 KRTAP4-5Q9BYR2 181 aa5.59□□□□□ -1.51
HDAC9-210ENST00000428307 A8MUN3 132 aa5.58□□□□□ -1.52
HDAC9-210ENST00000428307 CHKB-CPT1BH3BT56 60 aa5.57□□□□□ -1.52
HDAC9-210ENST00000428307 Q75L30 129 aa5.57□□□□□ -1.52
HDAC9-210ENST00000428307 V9GYY9 64 aa5.57□□□□□ -1.52
HDAC9-210ENST00000428307 SPINK7P58062 85 aa5.56□□□□□ -1.52
HDAC9-210ENST00000428307 PRR15LQ9BU68 103 aa5.55□□□□□ -1.52
HDAC9-210ENST00000428307 ATP11AUNQ6ZP68 121 aa5.53□□□□□ -1.52
HDAC9-210ENST00000428307 XP32Q5T750 250 aa5.52□□□□□ -1.53
HDAC9-210ENST00000428307 BRK1Q8WUW1 75 aa5.52□□□□□ -1.53
HDAC9-210ENST00000428307 Q5VV11 94 aa5.51□□□□□ -1.53
HDAC9-210ENST00000428307 RPL37P61927 97 aaKnown RBP5.49□□□□□ -1.53
HDAC9-210ENST00000428307 LINC01558Q9Y6Z2 57 aa5.49□□□□□ -1.53
HDAC9-210ENST00000428307 ABCA13Q86UQ4 5058 aa5.48□□□□□ -1.53
HDAC9-210ENST00000428307 KRTAP3-1Q9BYR8 98 aa5.47□□□□□ -1.53
HDAC9-210ENST00000428307 LCE2CQ5TA81 110 aa5.43□□□□□ -1.54
HDAC9-210ENST00000428307 PRO0628Q9UI54 55 aa5.43□□□□□ -1.54
HDAC9-210ENST00000428307 A6NED7 52 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms