RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 KRTAP4-16G5E9R7 235 aaPredicted RBP5.71□□□□□ -1.5
CLTCL1-202ENST00000427926 DMXL2Q8TDJ6 3036 aa5.7□□□□□ -1.5
CLTCL1-202ENST00000427926 NDUFAF8A1L188 74 aa5.7□□□□□ -1.5
CLTCL1-202ENST00000427926 Q6ZRN7 208 aaPredicted RBP5.7□□□□□ -1.5
CLTCL1-202ENST00000427926 NSD1Q96L73 2696 aaPredicted RBP5.7□□□□□ -1.5
CLTCL1-202ENST00000427926 A8MUU9 505 aa5.69□□□□□ -1.5
CLTCL1-202ENST00000427926 KALRNO60229 2985 aa5.69□□□□□ -1.5
CLTCL1-202ENST00000427926 ADGRG4Q8IZF6 3080 aa5.68□□□□□ -1.5
CLTCL1-202ENST00000427926 LRBAP50851 2863 aa5.66□□□□□ -1.5
CLTCL1-202ENST00000427926 UTP20O75691 2785 aaKnown RBP5.66□□□□□ -1.5
CLTCL1-202ENST00000427926 FREM2Q5SZK8 3169 aa5.65□□□□□ -1.51
CLTCL1-202ENST00000427926 HIVEP1P15822 2718 aa5.64□□□□□ -1.51
CLTCL1-202ENST00000427926 NBEAQ8NFP9 2946 aa5.64□□□□□ -1.51
CLTCL1-202ENST00000427926 KRTAP29-1A8MX34 341 aaPredicted RBP5.61□□□□□ -1.51
CLTCL1-202ENST00000427926 KRTAP13-2Q52LG2 175 aa5.6□□□□□ -1.51
CLTCL1-202ENST00000427926 SPEGQ15772 3267 aa5.59□□□□□ -1.51
CLTCL1-202ENST00000427926 APCP25054 2843 aa5.58□□□□□ -1.52
CLTCL1-202ENST00000427926 KRTAP11-1Q8IUC1 163 aa5.58□□□□□ -1.52
CLTCL1-202ENST00000427926 ZZEF1O43149 2961 aa5.58□□□□□ -1.52
CLTCL1-202ENST00000427926 SPENQ96T58 3664 aaKnown RBP5.57□□□□□ -1.52
CLTCL1-202ENST00000427926 KMT2BQ9UMN6 2715 aaPredicted RBP5.56□□□□□ -1.52
CLTCL1-202ENST00000427926 DMXL1Q9Y485 3027 aa5.55□□□□□ -1.52
CLTCL1-202ENST00000427926 TNP1P09430 55 aa5.52□□□□□ -1.53
CLTCL1-202ENST00000427926 KRTAP7-1Q8IUC3 87 aa5.51□□□□□ -1.53
CLTCL1-202ENST00000427926 CFAP47Q6ZTR5 3102 aa5.51□□□□□ -1.53
CLTCL1-202ENST00000427926 NIPBLQ6KC79 2804 aaeCLIP5.51□□□□□ -1.53
CLTCL1-202ENST00000427926 ASH1LQ9NR48 2969 aaKnown RBP5.5□□□□□ -1.53
CLTCL1-202ENST00000427926 TENM4Q6N022 2769 aa5.5□□□□□ -1.53
CLTCL1-202ENST00000427926 ZFHX4Q86UP3 3567 aa5.49□□□□□ -1.53
CLTCL1-202ENST00000427926 ZANQ9Y493 2812 aa5.49□□□□□ -1.53
CLTCL1-202ENST00000427926 CRYBG3Q68DQ2 2970 aa5.49□□□□□ -1.53
CLTCL1-202ENST00000427926 A0A1B0GVY2 172 aa5.49□□□□□ -1.53
CLTCL1-202ENST00000427926 ASPMQ8IZT6 3477 aa5.48□□□□□ -1.53
CLTCL1-202ENST00000427926 A8MU10 97 aa5.48□□□□□ -1.53
CLTCL1-202ENST00000427926 KRTAP10-8P60410 259 aa5.48□□□□□ -1.53
CLTCL1-202ENST00000427926 KRTAP13-1Q8IUC0 172 aa5.47□□□□□ -1.53
CLTCL1-202ENST00000427926 CELSR2Q9HCU4 2923 aa5.47□□□□□ -1.53
CLTCL1-202ENST00000427926 BSNQ9UPA5 3926 aa5.47□□□□□ -1.53
CLTCL1-202ENST00000427926 KRTAP10-10P60014 251 aa5.44□□□□□ -1.54
CLTCL1-202ENST00000427926 HRNRQ86YZ3 2850 aaPredicted RBP5.44□□□□□ -1.54
CLTCL1-202ENST00000427926 DCHS2Q6V1P9 2916 aa5.42□□□□□ -1.54
CLTCL1-202ENST00000427926 XP32Q5T750 250 aa5.42□□□□□ -1.54
CLTCL1-202ENST00000427926 LOC400499M0QZD8 3231 aa5.4□□□□□ -1.55
CLTCL1-202ENST00000427926 TPRXLQ17RH7 258 aa5.39□□□□□ -1.55
CLTCL1-202ENST00000427926 PRO2289Q9P1D8 64 aa5.39□□□□□ -1.55
CLTCL1-202ENST00000427926 DCHS1Q96JQ0 3298 aa5.36□□□□□ -1.55
CLTCL1-202ENST00000427926 LAMA5O15230 3695 aa5.34□□□□□ -1.55
CLTCL1-202ENST00000427926 C10orf95Q9H7T3 257 aa5.32□□□□□ -1.56
CLTCL1-202ENST00000427926 FBN2P35556 2912 aa5.32□□□□□ -1.56
CLTCL1-202ENST00000427926 NF1P21359 2839 aa5.31□□□□□ -1.56
CLTCL1-202ENST00000427926 KRTAP1-4P0C5Y4 121 aa5.3□□□□□ -1.56
CLTCL1-202ENST00000427926 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
CLTCL1-202ENST00000427926 MXRA5Q9NR99 2828 aa5.2□□□□□ -1.58
CLTCL1-202ENST00000427926 RELNP78509 3460 aa5.2□□□□□ -1.58
CLTCL1-202ENST00000427926 KRTAP13-3Q3SY46 172 aa5.2□□□□□ -1.58
CLTCL1-202ENST00000427926 TENM1Q9UKZ4 2725 aa5.17□□□□□ -1.58
CLTCL1-202ENST00000427926 P0C880 135 aa5.16□□□□□ -1.58
CLTCL1-202ENST00000427926 CELSR1Q9NYQ6 3014 aa5.15□□□□□ -1.59
CLTCL1-202ENST00000427926 TENM3Q9P273 2699 aa5.14□□□□□ -1.59
CLTCL1-202ENST00000427926 TENM2Q9NT68 2774 aa5.13□□□□□ -1.59
CLTCL1-202ENST00000427926 SMG1Q96Q15 3661 aaKnown RBP5.11□□□□□ -1.59
CLTCL1-202ENST00000427926 AKAP9Q99996 3911 aa5.08□□□□□ -1.6
CLTCL1-202ENST00000427926 PDZD2O15018 2839 aa5.08□□□□□ -1.6
CLTCL1-202ENST00000427926 NBPF19A0A087WUL8 3843 aa5.07□□□□□ -1.6
CLTCL1-202ENST00000427926 VPS13CQ709C8 3753 aa5.06□□□□□ -1.6
CLTCL1-202ENST00000427926 PKD1L1Q8TDX9 2849 aa5.05□□□□□ -1.6
CLTCL1-202ENST00000427926 ZFHX3Q15911 3703 aa5.03□□□□□ -1.6
CLTCL1-202ENST00000427926 ANK3Q12955 4377 aaKnown RBP5.03□□□□□ -1.6
CLTCL1-202ENST00000427926 H0YAA0 97 aa4.99□□□□□ -1.61
CLTCL1-202ENST00000427926 OTOGQ6ZRI0 2925 aa4.98□□□□□ -1.61
CLTCL1-202ENST00000427926 VWFP04275 2813 aa4.96□□□□□ -1.62
CLTCL1-202ENST00000427926 TGP01266 2768 aa4.95□□□□□ -1.62
CLTCL1-202ENST00000427926 INE1O15225 51 aa4.95□□□□□ -1.62
CLTCL1-202ENST00000427926 FBN1P35555 2871 aaKnown RBP4.94□□□□□ -1.62
CLTCL1-202ENST00000427926 CSMD1Q96PZ7 3565 aa4.91□□□□□ -1.62
CLTCL1-202ENST00000427926 CSMD2Q7Z408 3487 aa4.9□□□□□ -1.63
CLTCL1-202ENST00000427926 KRTAP23-1A1A580 65 aa4.88□□□□□ -1.63
CLTCL1-202ENST00000427926 ZNF469Q96JG9 3925 aaPredicted RBP4.86□□□□□ -1.63
CLTCL1-202ENST00000427926 KRTAP15-1Q3LI76 137 aa4.85□□□□□ -1.63
CLTCL1-202ENST00000427926 SVEP1Q4LDE5 3571 aa4.84□□□□□ -1.64
CLTCL1-202ENST00000427926 CUBNO60494 3623 aa4.84□□□□□ -1.64
CLTCL1-202ENST00000427926 CMYA5Q8N3K9 4069 aa4.77□□□□□ -1.65
CLTCL1-202ENST00000427926 KRTAP12-2P59991 146 aa4.76□□□□□ -1.65
CLTCL1-202ENST00000427926 KRTAP13-4Q3LI77 160 aa4.75□□□□□ -1.65
CLTCL1-202ENST00000427926 ANK2Q01484 3957 aa4.74□□□□□ -1.65
CLTCL1-202ENST00000427926 SRRM2Q9UQ35 2752 aaKnown RBP4.71□□□□□ -1.66
CLTCL1-202ENST00000427926 TRRAPQ9Y4A5 3859 aa4.7□□□□□ -1.66
CLTCL1-202ENST00000427926 FBN3Q75N90 2809 aa4.67□□□□□ -1.66
CLTCL1-202ENST00000427926 DNAH3Q8TD57 4116 aa4.67□□□□□ -1.66
CLTCL1-202ENST00000427926 KRTAP3-1Q9BYR8 98 aa4.66□□□□□ -1.66
CLTCL1-202ENST00000427926 CRCT1Q9UGL9 99 aa4.64□□□□□ -1.67
CLTCL1-202ENST00000427926 KRTAP12-1P59990 96 aa4.62□□□□□ -1.67
CLTCL1-202ENST00000427926 MEGF8Q7Z7M0 2845 aa4.62□□□□□ -1.67
CLTCL1-202ENST00000427926 MT1HL1P0DM35 61 aa4.61□□□□□ -1.67
CLTCL1-202ENST00000427926 KRTAP4-5Q9BYR2 181 aa4.57□□□□□ -1.68
CLTCL1-202ENST00000427926 COL7A1Q02388 2944 aa4.55□□□□□ -1.68
CLTCL1-202ENST00000427926 HUWE1Q7Z6Z7 4374 aaKnown RBP4.55□□□□□ -1.68
CLTCL1-202ENST00000427926 KRTAP10-12P60413 245 aa4.54□□□□□ -1.68
CLTCL1-202ENST00000427926 KRTAP10-6P60371 365 aaPredicted RBP4.51□□□□□ -1.69
CLTCL1-202ENST00000427926 ALMS1Q8TCU4 4167 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms