RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 C9orf118A6NHY6 69 aa7.72□□□□□ -1.17
RTN4-210ENST00000427710 LYRM7Q5U5X0 104 aa7.72□□□□□ -1.17
RTN4-210ENST00000427710 Q6ZQT0 140 aa7.72□□□□□ -1.17
RTN4-210ENST00000427710 MTURNQ8N3F0 131 aa7.71□□□□□ -1.18
RTN4-210ENST00000427710 C14orf132Q9NPU4 83 aa7.71□□□□□ -1.18
RTN4-210ENST00000427710 JMJD7-PLA2G4BH0Y9G9 81 aa7.7□□□□□ -1.18
RTN4-210ENST00000427710 TRBV20-1A0A075B6N2 111 aa7.69□□□□□ -1.18
RTN4-210ENST00000427710 LOC110117498A0A087WWA1 95 aa7.68□□□□□ -1.18
RTN4-210ENST00000427710 A0A1B0GVX0 72 aa7.68□□□□□ -1.18
RTN4-210ENST00000427710 A0A1W2PPM0 123 aa7.67□□□□□ -1.18
RTN4-210ENST00000427710 C8orf87E5RJ46 101 aa7.64□□□□□ -1.19
RTN4-210ENST00000427710 M0R2T5 61 aa7.64□□□□□ -1.19
RTN4-210ENST00000427710 J3KT08 172 aa7.62□□□□□ -1.19
RTN4-210ENST00000427710 PDE6GP18545 87 aa7.62□□□□□ -1.19
RTN4-210ENST00000427710 C21orf62-AS1Q17RA5 79 aa7.62□□□□□ -1.19
RTN4-210ENST00000427710 KRTAP10-6P60371 365 aaPredicted RBP7.61□□□□□ -1.19
RTN4-210ENST00000427710 H3BT86 120 aa7.6□□□□□ -1.19
RTN4-210ENST00000427710 LORP23490 312 aaPredicted RBP7.59□□□□□ -1.19
RTN4-210ENST00000427710 IGKV3D-7A0A0C4DH55 119 aa7.58□□□□□ -1.2
RTN4-210ENST00000427710 NDUFB1O75438 58 aa7.58□□□□□ -1.2
RTN4-210ENST00000427710 SPCS1Q9Y6A9 102 aa7.58□□□□□ -1.2
RTN4-210ENST00000427710 A0A1B0GW54 56 aa7.57□□□□□ -1.2
RTN4-210ENST00000427710 A8MWP4 228 aa7.57□□□□□ -1.2
RTN4-210ENST00000427710 NREPQ16612 68 aa7.57□□□□□ -1.2
RTN4-210ENST00000427710 C8orf17Q9NRJ1 99 aa7.57□□□□□ -1.2
RTN4-210ENST00000427710 COL5A1-AS1Q5SY13 56 aa7.53□□□□□ -1.2
RTN4-210ENST00000427710 HRES1P13985 223 aa7.52□□□□□ -1.21
RTN4-210ENST00000427710 ZCCHC13Q8WW36 166 aaKnown RBP7.52□□□□□ -1.21
RTN4-210ENST00000427710 PRR15Q8IV56 129 aa7.51□□□□□ -1.21
RTN4-210ENST00000427710 FAM236DA0A1B0GTK5 79 aa7.5□□□□□ -1.21
RTN4-210ENST00000427710 FAM236CP0DP71 79 aa7.5□□□□□ -1.21
RTN4-210ENST00000427710 Q8N9P0 234 aaPredicted RBP7.5□□□□□ -1.21
RTN4-210ENST00000427710 PCP4L1A6NKN8 68 aa7.49□□□□□ -1.21
RTN4-210ENST00000427710 Q6ZVQ6 151 aa7.49□□□□□ -1.21
RTN4-210ENST00000427710 MMP24-AS1A0A0U1RRL7 71 aa7.48□□□□□ -1.21
RTN4-210ENST00000427710 KRTAP9-6A0A140TA67 174 aa7.47□□□□□ -1.21
RTN4-210ENST00000427710 K7EQZ3 153 aa7.47□□□□□ -1.21
RTN4-210ENST00000427710 MPLKIPQ8TAP9 179 aa7.47□□□□□ -1.21
RTN4-210ENST00000427710 PRO0461Q9UI25 63 aa7.47□□□□□ -1.21
RTN4-210ENST00000427710 K7EP34 96 aa7.46□□□□□ -1.22
RTN4-210ENST00000427710 RBM12B-AS1Q9P1G2 102 aa7.45□□□□□ -1.22
RTN4-210ENST00000427710 BPY2O14599 106 aa7.44□□□□□ -1.22
RTN4-210ENST00000427710 SPINK7P58062 85 aa7.44□□□□□ -1.22
RTN4-210ENST00000427710 TMEM254Q8TBM7 123 aa7.43□□□□□ -1.22
RTN4-210ENST00000427710 MRPL34Q9BQ48 92 aaKnown RBP7.43□□□□□ -1.22
RTN4-210ENST00000427710 Q8N9L7 120 aa7.42□□□□□ -1.22
RTN4-210ENST00000427710 hDV103S1A0JD37 113 aa7.41□□□□□ -1.22
RTN4-210ENST00000427710 NDUFS5O43920 106 aa7.4□□□□□ -1.22
RTN4-210ENST00000427710 WFDC13Q8IUB5 93 aa7.38□□□□□ -1.23
RTN4-210ENST00000427710 LINC00846Q9NV44 126 aa7.38□□□□□ -1.23
RTN4-210ENST00000427710 KRTAP9-8Q9BYQ0 159 aa7.36□□□□□ -1.23
RTN4-210ENST00000427710 GTF2H5Q6ZYL4 71 aa7.35□□□□□ -1.23
RTN4-210ENST00000427710 CRCT1Q9UGL9 99 aa7.35□□□□□ -1.23
RTN4-210ENST00000427710 FSIP2Q5CZC0 6907 aa7.35□□□□□ -1.23
RTN4-210ENST00000427710 Q5W150 140 aa7.31□□□□□ -1.24
RTN4-210ENST00000427710 CASC2Q6XLA1 102 aa7.31□□□□□ -1.24
RTN4-210ENST00000427710 UBL5Q9BZL1 73 aa7.31□□□□□ -1.24
RTN4-210ENST00000427710 HCG22E2RYF7 251 aa7.3□□□□□ -1.24
RTN4-210ENST00000427710 ETDBQ3ZM63 59 aa7.3□□□□□ -1.24
RTN4-210ENST00000427710 IGKV2D-30A0A075B6S6 120 aa7.28□□□□□ -1.24
RTN4-210ENST00000427710 F8W1H4 67 aa7.28□□□□□ -1.24
RTN4-210ENST00000427710 MT2AP02795 61 aa7.28□□□□□ -1.24
RTN4-210ENST00000427710 IGKV2-30P06310 120 aa7.28□□□□□ -1.24
RTN4-210ENST00000427710 MT1FP04733 61 aa7.24□□□□□ -1.25
RTN4-210ENST00000427710 C7orf65Q6ZTY9 151 aa7.21□□□□□ -1.26
RTN4-210ENST00000427710 USH2AO75445 5202 aa7.2□□□□□ -1.26
RTN4-210ENST00000427710 KRTAP10-10P60014 251 aa7.19□□□□□ -1.26
RTN4-210ENST00000427710 CXCL6P80162 114 aa7.18□□□□□ -1.26
RTN4-210ENST00000427710 H1FX-AS1Q4G0G2 97 aa7.16□□□□□ -1.26
RTN4-210ENST00000427710 C4orf26Q17RF5 130 aa7.13□□□□□ -1.27
RTN4-210ENST00000427710 KRTAP9-3Q9BYQ3 159 aa7.13□□□□□ -1.27
RTN4-210ENST00000427710 SSPOA2VEC9 5147 aa7.13□□□□□ -1.27
RTN4-210ENST00000427710 LOC100996750A0A140TA64 210 aa7.1□□□□□ -1.27
RTN4-210ENST00000427710 KRTAP4-6Q9BYQ5 205 aa7.1□□□□□ -1.27
RTN4-210ENST00000427710 A0A1B0GV90 55 aa7.06□□□□□ -1.28
RTN4-210ENST00000427710 ACYP1P07311 99 aa7.05□□□□□ -1.28
RTN4-210ENST00000427710 TP53AIP1Q9HCN2 124 aa7.05□□□□□ -1.28
RTN4-210ENST00000427710 KRTAP3-1Q9BYR8 98 aa7.04□□□□□ -1.28
RTN4-210ENST00000427710 FAM240AA0A1B0GVK7 77 aa7.02□□□□□ -1.29
RTN4-210ENST00000427710 HIST1H4AP62805 103 aaKnown RBP7.01□□□□□ -1.29
RTN4-210ENST00000427710 C1orf64Q8NEQ6 169 aa7□□□□□ -1.29
RTN4-210ENST00000427710 C5orf47Q569G3 176 aa6.97□□□□□ -1.29
RTN4-210ENST00000427710 ATP5EP2Q5VTU8 51 aa6.97□□□□□ -1.29
RTN4-210ENST00000427710 A0A087WVE0 104 aa6.95□□□□□ -1.3
RTN4-210ENST00000427710 KRTAP19-1Q8IUB9 90 aa6.95□□□□□ -1.3
RTN4-210ENST00000427710 CYP4F30PQ9H0H9 118 aa6.95□□□□□ -1.3
RTN4-210ENST00000427710 S4R3F8 94 aa6.95□□□□□ -1.3
RTN4-210ENST00000427710 TRAV22A0A0B4J277 110 aa6.94□□□□□ -1.3
RTN4-210ENST00000427710 LINC00643Q86TS7 51 aa6.92□□□□□ -1.3
RTN4-210ENST00000427710 FCGBPQ9Y6R7 5405 aaPredicted RBP6.91□□□□□ -1.3
RTN4-210ENST00000427710 LCA10Q71F78 164 aa6.91□□□□□ -1.3
RTN4-210ENST00000427710 H0Y9P7 68 aa6.89□□□□□ -1.31
RTN4-210ENST00000427710 LOC101927531A0A1B0GV80 90 aa6.88□□□□□ -1.31
RTN4-210ENST00000427710 UQCRQO14949 82 aa6.88□□□□□ -1.31
RTN4-210ENST00000427710 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.85□□□□□ -1.31
RTN4-210ENST00000427710 CSAG1Q6PB30 78 aa6.85□□□□□ -1.31
RTN4-210ENST00000427710 FAM236AA0A1B0GUQ0 79 aa6.84□□□□□ -1.31
RTN4-210ENST00000427710 FAM236BA0A1B0GV22 79 aa6.84□□□□□ -1.31
RTN4-210ENST00000427710 ATOX1O00244 68 aa6.8□□□□□ -1.32
RTN4-210ENST00000427710 KRTAP19-6Q3LI70 58 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms