RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 KRTAP10-8P60410 259 aa4.8□□□□□ -1.64
SMARCAL1-206ENST00000427645 RPS29P62273 56 aaKnown RBP4.8□□□□□ -1.64
SMARCAL1-206ENST00000427645 HRCT1Q6UXD1 115 aa4.8□□□□□ -1.64
SMARCAL1-206ENST00000427645 LINC00304Q8N9R0 145 aa4.8□□□□□ -1.64
SMARCAL1-206ENST00000427645 LINC00846Q9NV44 126 aa4.8□□□□□ -1.64
SMARCAL1-206ENST00000427645 A0A087WSZ3 146 aa4.79□□□□□ -1.64
SMARCAL1-206ENST00000427645 KRTAP19-4Q3LI73 84 aa4.79□□□□□ -1.64
SMARCAL1-206ENST00000427645 Q5XG85 94 aa4.79□□□□□ -1.64
SMARCAL1-206ENST00000427645 LIMD2Q9BT23 127 aa4.79□□□□□ -1.64
SMARCAL1-206ENST00000427645 ASB16-AS1Q495Z4 193 aa4.77□□□□□ -1.65
SMARCAL1-206ENST00000427645 Q6ZVQ6 151 aa4.77□□□□□ -1.65
SMARCAL1-206ENST00000427645 LINC00643Q86TS7 51 aa4.77□□□□□ -1.65
SMARCAL1-206ENST00000427645 MUC2Q02817 5179 aa4.76□□□□□ -1.65
SMARCAL1-206ENST00000427645 J3KT08 172 aa4.75□□□□□ -1.65
SMARCAL1-206ENST00000427645 ATP5EP2Q5VTU8 51 aa4.75□□□□□ -1.65
SMARCAL1-206ENST00000427645 BPY2O14599 106 aa4.74□□□□□ -1.65
SMARCAL1-206ENST00000427645 CXCL6P80162 114 aa4.74□□□□□ -1.65
SMARCAL1-206ENST00000427645 LINC00472Q9H8W2 130 aa4.74□□□□□ -1.65
SMARCAL1-206ENST00000427645 SIGMAR1Q99720 223 aa4.73□□□□□ -1.65
SMARCAL1-206ENST00000427645 KRTAP23-1A1A580 65 aa4.71□□□□□ -1.66
SMARCAL1-206ENST00000427645 NDUFB1O75438 58 aa4.71□□□□□ -1.66
SMARCAL1-206ENST00000427645 IGKV4-1P06312 121 aa4.7□□□□□ -1.66
SMARCAL1-206ENST00000427645 LCE1DQ5T752 114 aa4.7□□□□□ -1.66
SMARCAL1-206ENST00000427645 Q96NJ1 140 aa4.7□□□□□ -1.66
SMARCAL1-206ENST00000427645 IMUPQ9GZP8 106 aa4.7□□□□□ -1.66
SMARCAL1-206ENST00000427645 IGKV3D-7A0A0C4DH55 119 aa4.69□□□□□ -1.66
SMARCAL1-206ENST00000427645 DEFB116Q30KQ4 102 aa4.69□□□□□ -1.66
SMARCAL1-206ENST00000427645 C1orf195Q5TG92 126 aa4.69□□□□□ -1.66
SMARCAL1-206ENST00000427645 A8MWP4 228 aa4.68□□□□□ -1.66
SMARCAL1-206ENST00000427645 DSCR10P59022 87 aa4.67□□□□□ -1.66
SMARCAL1-206ENST00000427645 MT-ATP8P03928 68 aa4.66□□□□□ -1.66
SMARCAL1-206ENST00000427645 HIST1H4AP62805 103 aaKnown RBP4.66□□□□□ -1.66
SMARCAL1-206ENST00000427645 PRR15Q8IV56 129 aa4.66□□□□□ -1.66
SMARCAL1-206ENST00000427645 FP248Q71RG6 208 aaPredicted RBP4.65□□□□□ -1.67
SMARCAL1-206ENST00000427645 A0A1B0GVX0 72 aa4.64□□□□□ -1.67
SMARCAL1-206ENST00000427645 KRTAP4-7Q9BYR0 210 aa4.64□□□□□ -1.67
SMARCAL1-206ENST00000427645 C8orf87E5RJ46 101 aa4.63□□□□□ -1.67
SMARCAL1-206ENST00000427645 K7EQZ3 153 aa4.63□□□□□ -1.67
SMARCAL1-206ENST00000427645 PRR4Q16378 134 aa4.63□□□□□ -1.67
SMARCAL1-206ENST00000427645 IGHV6-1A0A0B4J1U7 121 aa4.62□□□□□ -1.67
SMARCAL1-206ENST00000427645 LINC00313P59037 77 aa4.61□□□□□ -1.67
SMARCAL1-206ENST00000427645 Q8N9L7 120 aa4.61□□□□□ -1.67
SMARCAL1-206ENST00000427645 RETNLBQ9BQ08 111 aa4.61□□□□□ -1.67
SMARCAL1-206ENST00000427645 KRTAP3-1Q9BYR8 98 aa4.61□□□□□ -1.67
SMARCAL1-206ENST00000427645 HCG22E2RYF7 251 aa4.6□□□□□ -1.67
SMARCAL1-206ENST00000427645 C8orf17Q9NRJ1 99 aa4.6□□□□□ -1.67
SMARCAL1-206ENST00000427645 FAT4Q6V0I7 4981 aa4.59□□□□□ -1.67
SMARCAL1-206ENST00000427645 IGLV7-46A0A075B6I9 117 aa4.59□□□□□ -1.67
SMARCAL1-206ENST00000427645 A0A087WVE0 104 aa4.58□□□□□ -1.68
SMARCAL1-206ENST00000427645 hDV103S1A0JD37 113 aa4.58□□□□□ -1.68
SMARCAL1-206ENST00000427645 CASC2Q6XLA1 102 aa4.58□□□□□ -1.68
SMARCAL1-206ENST00000427645 MMP24-AS1A0A0U1RRL7 71 aa4.57□□□□□ -1.68
SMARCAL1-206ENST00000427645 SCGB1A1P11684 91 aa4.57□□□□□ -1.68
SMARCAL1-206ENST00000427645 TMEM254Q8TBM7 123 aa4.57□□□□□ -1.68
SMARCAL1-206ENST00000427645 WFDC13Q8IUB5 93 aa4.56□□□□□ -1.68
SMARCAL1-206ENST00000427645 MRPL34Q9BQ48 92 aaKnown RBP4.56□□□□□ -1.68
SMARCAL1-206ENST00000427645 NOTCH2NLQ7Z3S9 236 aa4.55□□□□□ -1.68
SMARCAL1-206ENST00000427645 SMIM20Q8N5G0 67 aa4.55□□□□□ -1.68
SMARCAL1-206ENST00000427645 MUC17Q685J3 4493 aa4.54□□□□□ -1.68
SMARCAL1-206ENST00000427645 FAM236AA0A1B0GUQ0 79 aa4.54□□□□□ -1.68
SMARCAL1-206ENST00000427645 FAM236BA0A1B0GV22 79 aa4.54□□□□□ -1.68
SMARCAL1-206ENST00000427645 ATOX1O00244 68 aa4.54□□□□□ -1.68
SMARCAL1-206ENST00000427645 KRTAP4-9Q9BYQ8 210 aa4.54□□□□□ -1.68
SMARCAL1-206ENST00000427645 C9orf92A6NGG3 77 aa4.53□□□□□ -1.68
SMARCAL1-206ENST00000427645 TPRXLQ17RH7 258 aa4.53□□□□□ -1.68
SMARCAL1-206ENST00000427645 TP53AIP1Q9HCN2 124 aa4.53□□□□□ -1.68
SMARCAL1-206ENST00000427645 KRTAP13-3Q3SY46 172 aa4.52□□□□□ -1.69
SMARCAL1-206ENST00000427645 Q8N9P0 234 aaPredicted RBP4.52□□□□□ -1.69
SMARCAL1-206ENST00000427645 A0A0U1RQV1 116 aa4.51□□□□□ -1.69
SMARCAL1-206ENST00000427645 KRTAP16-1A8MUX0 517 aa4.51□□□□□ -1.69
SMARCAL1-206ENST00000427645 NDUFS5O43920 106 aa4.51□□□□□ -1.69
SMARCAL1-206ENST00000427645 C20orf166-AS1Q96NR2 134 aa4.5□□□□□ -1.69
SMARCAL1-206ENST00000427645 UQCRQO14949 82 aa4.49□□□□□ -1.69
SMARCAL1-206ENST00000427645 Q75L30 129 aa4.49□□□□□ -1.69
SMARCAL1-206ENST00000427645 OCR1Q9BZK8 76 aa4.49□□□□□ -1.69
SMARCAL1-206ENST00000427645 TRAV7A0A075B6U4 112 aa4.48□□□□□ -1.69
SMARCAL1-206ENST00000427645 A8MUU9 505 aa4.48□□□□□ -1.69
SMARCAL1-206ENST00000427645 C5orf47Q569G3 176 aa4.48□□□□□ -1.69
SMARCAL1-206ENST00000427645 SERP2Q8N6R1 65 aa4.47□□□□□ -1.69
SMARCAL1-206ENST00000427645 LCE4AQ5TA78 99 aa4.46□□□□□ -1.7
SMARCAL1-206ENST00000427645 ATP11AUNQ6ZP68 121 aa4.46□□□□□ -1.7
SMARCAL1-206ENST00000427645 ANAPC13Q9BS18 74 aa4.46□□□□□ -1.7
SMARCAL1-206ENST00000427645 MP68P56378 58 aa4.45□□□□□ -1.7
SMARCAL1-206ENST00000427645 RPL37P61927 97 aaKnown RBP4.45□□□□□ -1.7
SMARCAL1-206ENST00000427645 TRAV22A0A0B4J277 110 aa4.43□□□□□ -1.7
SMARCAL1-206ENST00000427645 H3BPC8 53 aa4.43□□□□□ -1.7
SMARCAL1-206ENST00000427645 COX7CP15954 63 aa4.43□□□□□ -1.7
SMARCAL1-206ENST00000427645 ZCCHC13Q8WW36 166 aaKnown RBP4.43□□□□□ -1.7
SMARCAL1-206ENST00000427645 FSIP2Q5CZC0 6907 aa4.42□□□□□ -1.7
SMARCAL1-206ENST00000427645 KRTAP9-7A8MTY7 169 aa4.41□□□□□ -1.7
SMARCAL1-206ENST00000427645 H0Y9P7 68 aa4.41□□□□□ -1.7
SMARCAL1-206ENST00000427645 SEC61BP60468 96 aaKnown RBP4.41□□□□□ -1.7
SMARCAL1-206ENST00000427645 Q5W150 140 aa4.41□□□□□ -1.7
SMARCAL1-206ENST00000427645 KRTAP4-2Q9BYR5 136 aa4.4□□□□□ -1.71
SMARCAL1-206ENST00000427645 C1orf64Q8NEQ6 169 aa4.39□□□□□ -1.71
SMARCAL1-206ENST00000427645 LINC00208Q96KT6 92 aa4.39□□□□□ -1.71
SMARCAL1-206ENST00000427645 LOC101927531A0A1B0GV80 90 aa4.38□□□□□ -1.71
SMARCAL1-206ENST00000427645 C20orf197Q8N268 126 aa4.37□□□□□ -1.71
SMARCAL1-206ENST00000427645 KRTAP4-11Q9BYQ6 195 aa4.37□□□□□ -1.71
SMARCAL1-206ENST00000427645 KRTAP4-1Q9BYQ7 146 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 301.9 ms