RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 CRCT1Q9UGL9 99 aa9.4□□□□□ -0.9
GPC1-205ENST00000427506 JMJD7-PLA2G4BH0Y9G9 81 aa9.38□□□□□ -0.91
GPC1-205ENST00000427506 J3KT08 172 aa9.38□□□□□ -0.91
GPC1-205ENST00000427506 Q6ZQT0 140 aa9.37□□□□□ -0.91
GPC1-205ENST00000427506 FAM236DA0A1B0GTK5 79 aa9.36□□□□□ -0.91
GPC1-205ENST00000427506 FAM236CP0DP71 79 aa9.36□□□□□ -0.91
GPC1-205ENST00000427506 LYRM7Q5U5X0 104 aa9.34□□□□□ -0.91
GPC1-205ENST00000427506 TSTD3H0UI37 97 aa9.33□□□□□ -0.92
GPC1-205ENST00000427506 NDUFB1O75438 58 aa9.33□□□□□ -0.92
GPC1-205ENST00000427506 BATFQ16520 125 aa9.33□□□□□ -0.92
GPC1-205ENST00000427506 LOC110117498A0A087WWA1 95 aa9.32□□□□□ -0.92
GPC1-205ENST00000427506 RBM12B-AS1Q9P1G2 102 aa9.32□□□□□ -0.92
GPC1-205ENST00000427506 FSIP2Q5CZC0 6907 aa9.32□□□□□ -0.92
GPC1-205ENST00000427506 PDE6GP18545 87 aa9.31□□□□□ -0.92
GPC1-205ENST00000427506 A0A1B0GW54 56 aa9.3□□□□□ -0.92
GPC1-205ENST00000427506 C14orf132Q9NPU4 83 aa9.3□□□□□ -0.92
GPC1-205ENST00000427506 HRES1P13985 223 aa9.27□□□□□ -0.93
GPC1-205ENST00000427506 ZCCHC13Q8WW36 166 aaKnown RBP9.26□□□□□ -0.93
GPC1-205ENST00000427506 A8MWP4 228 aa9.25□□□□□ -0.93
GPC1-205ENST00000427506 MPLKIPQ8TAP9 179 aa9.24□□□□□ -0.93
GPC1-205ENST00000427506 C8orf17Q9NRJ1 99 aa9.23□□□□□ -0.93
GPC1-205ENST00000427506 NREPQ16612 68 aa9.22□□□□□ -0.93
GPC1-205ENST00000427506 IGKV3D-7A0A0C4DH55 119 aa9.21□□□□□ -0.94
GPC1-205ENST00000427506 Q8N9P0 234 aaPredicted RBP9.21□□□□□ -0.94
GPC1-205ENST00000427506 C9orf118A6NHY6 69 aa9.19□□□□□ -0.94
GPC1-205ENST00000427506 SPINK7P58062 85 aa9.19□□□□□ -0.94
GPC1-205ENST00000427506 MTURNQ8N3F0 131 aa9.19□□□□□ -0.94
GPC1-205ENST00000427506 KRTAP9-8Q9BYQ0 159 aa9.19□□□□□ -0.94
GPC1-205ENST00000427506 H3BT86 120 aa9.16□□□□□ -0.94
GPC1-205ENST00000427506 Q6ZVQ6 151 aa9.16□□□□□ -0.94
GPC1-205ENST00000427506 PRR15Q8IV56 129 aa9.16□□□□□ -0.94
GPC1-205ENST00000427506 LOC105371267A0A1B0GV96 52 aa9.15□□□□□ -0.94
GPC1-205ENST00000427506 A0A1W2PPM0 123 aa9.15□□□□□ -0.94
GPC1-205ENST00000427506 TAX1BP3O14907 124 aa9.15□□□□□ -0.94
GPC1-205ENST00000427506 MRPL34Q9BQ48 92 aaKnown RBP9.09□□□□□ -0.95
GPC1-205ENST00000427506 MMP24-AS1A0A0U1RRL7 71 aa9.08□□□□□ -0.96
GPC1-205ENST00000427506 MT2AP02795 61 aa9.08□□□□□ -0.96
GPC1-205ENST00000427506 TMEM254Q8TBM7 123 aa9.08□□□□□ -0.96
GPC1-205ENST00000427506 K7EQZ3 153 aa9.07□□□□□ -0.96
GPC1-205ENST00000427506 WFDC13Q8IUB5 93 aa9.07□□□□□ -0.96
GPC1-205ENST00000427506 hDV103S1A0JD37 113 aa9.05□□□□□ -0.96
GPC1-205ENST00000427506 NDUFS5O43920 106 aa9.05□□□□□ -0.96
GPC1-205ENST00000427506 BPY2O14599 106 aa9.04□□□□□ -0.96
GPC1-205ENST00000427506 SPCS1Q9Y6A9 102 aa9.04□□□□□ -0.96
GPC1-205ENST00000427506 KRTAP10-10P60014 251 aa9.01□□□□□ -0.97
GPC1-205ENST00000427506 MT1FP04733 61 aa9□□□□□ -0.97
GPC1-205ENST00000427506 Q8N9L7 120 aa8.94□□□□□ -0.98
GPC1-205ENST00000427506 SMCPP49901 116 aaPredicted RBP8.93□□□□□ -0.98
GPC1-205ENST00000427506 COL5A1-AS1Q5SY13 56 aa8.93□□□□□ -0.98
GPC1-205ENST00000427506 CASC2Q6XLA1 102 aa8.92□□□□□ -0.98
GPC1-205ENST00000427506 IGKV2D-30A0A075B6S6 120 aa8.91□□□□□ -0.98
GPC1-205ENST00000427506 IGKV2-30P06310 120 aa8.91□□□□□ -0.98
GPC1-205ENST00000427506 KRTAP9-3Q9BYQ3 159 aa8.9□□□□□ -0.98
GPC1-205ENST00000427506 HCG22E2RYF7 251 aa8.88□□□□□ -0.99
GPC1-205ENST00000427506 UBL5Q9BZL1 73 aa8.88□□□□□ -0.99
GPC1-205ENST00000427506 LCE2BO14633 110 aa8.87□□□□□ -0.99
GPC1-205ENST00000427506 Q5W150 140 aa8.87□□□□□ -0.99
GPC1-205ENST00000427506 C7orf65Q6ZTY9 151 aa8.87□□□□□ -0.99
GPC1-205ENST00000427506 USH2AO75445 5202 aa8.86□□□□□ -0.99
GPC1-205ENST00000427506 K7EP34 96 aa8.86□□□□□ -0.99
GPC1-205ENST00000427506 H1FX-AS1Q4G0G2 97 aa8.86□□□□□ -0.99
GPC1-205ENST00000427506 LINC00846Q9NV44 126 aa8.85□□□□□ -0.99
GPC1-205ENST00000427506 PRO0461Q9UI25 63 aa8.85□□□□□ -0.99
GPC1-205ENST00000427506 CXCL6P80162 114 aa8.81□□□□□ -1
GPC1-205ENST00000427506 GTF2H5Q6ZYL4 71 aa8.77□□□□□ -1.01
GPC1-205ENST00000427506 SSPOA2VEC9 5147 aa8.76□□□□□ -1.01
GPC1-205ENST00000427506 KRTAP19-1Q8IUB9 90 aa8.76□□□□□ -1.01
GPC1-205ENST00000427506 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.74□□□□□ -1.01
GPC1-205ENST00000427506 C4orf26Q17RF5 130 aa8.74□□□□□ -1.01
GPC1-205ENST00000427506 PCP4L1A6NKN8 68 aa8.71□□□□□ -1.02
GPC1-205ENST00000427506 F8W1H4 67 aa8.71□□□□□ -1.02
GPC1-205ENST00000427506 ETDBQ3ZM63 59 aa8.67□□□□□ -1.02
GPC1-205ENST00000427506 KRTAP9-7A8MTY7 169 aa8.65□□□□□ -1.02
GPC1-205ENST00000427506 TP53AIP1Q9HCN2 124 aa8.64□□□□□ -1.03
GPC1-205ENST00000427506 FCGBPQ9Y6R7 5405 aaPredicted RBP8.61□□□□□ -1.03
GPC1-205ENST00000427506 C5orf47Q569G3 176 aa8.59□□□□□ -1.03
GPC1-205ENST00000427506 C1orf64Q8NEQ6 169 aa8.58□□□□□ -1.04
GPC1-205ENST00000427506 KRTAP19-6Q3LI70 58 aa8.57□□□□□ -1.04
GPC1-205ENST00000427506 KRTAP3-1Q9BYR8 98 aa8.56□□□□□ -1.04
GPC1-205ENST00000427506 S4R3F8 94 aa8.56□□□□□ -1.04
GPC1-205ENST00000427506 FAM236AA0A1B0GUQ0 79 aa8.52□□□□□ -1.05
GPC1-205ENST00000427506 FAM236BA0A1B0GV22 79 aa8.52□□□□□ -1.05
GPC1-205ENST00000427506 CSAG1Q6PB30 78 aa8.5□□□□□ -1.05
GPC1-205ENST00000427506 ACYP1P07311 99 aa8.49□□□□□ -1.05
GPC1-205ENST00000427506 LCA10Q71F78 164 aa8.48□□□□□ -1.05
GPC1-205ENST00000427506 CYP4F30PQ9H0H9 118 aa8.45□□□□□ -1.06
GPC1-205ENST00000427506 TRAV22A0A0B4J277 110 aa8.44□□□□□ -1.06
GPC1-205ENST00000427506 HIST1H4AP62805 103 aaKnown RBP8.42□□□□□ -1.06
GPC1-205ENST00000427506 ATP5EP2Q5VTU8 51 aa8.42□□□□□ -1.06
GPC1-205ENST00000427506 LOC101927531A0A1B0GV80 90 aa8.41□□□□□ -1.06
GPC1-205ENST00000427506 FAM240AA0A1B0GVK7 77 aa8.41□□□□□ -1.06
GPC1-205ENST00000427506 MACF1Q9UPN3 7388 aaKnown RBP8.35□□□□□ -1.07
GPC1-205ENST00000427506 UQCRQO14949 82 aa8.34□□□□□ -1.07
GPC1-205ENST00000427506 H0Y9P7 68 aa8.32□□□□□ -1.08
GPC1-205ENST00000427506 KRTAP3-3Q9BYR6 98 aa8.32□□□□□ -1.08
GPC1-205ENST00000427506 ATOX1O00244 68 aa8.31□□□□□ -1.08
GPC1-205ENST00000427506 A0A087WVE0 104 aa8.3□□□□□ -1.08
GPC1-205ENST00000427506 Q5VV11 94 aa8.3□□□□□ -1.08
GPC1-205ENST00000427506 KLKP1Q107X0 134 aa8.29□□□□□ -1.08
GPC1-205ENST00000427506 LINC00643Q86TS7 51 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms