RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 LYSTQ99698 3801 aa5.16□□□□□ -1.58
SH3D19-204ENST00000427414 H3BPC8 53 aa5.16□□□□□ -1.58
SH3D19-204ENST00000427414 C8orf87E5RJ46 101 aa5.14□□□□□ -1.59
SH3D19-204ENST00000427414 TENM2Q9NT68 2774 aa5.14□□□□□ -1.59
SH3D19-204ENST00000427414 A0A0A0MQY5 61 aa5.14□□□□□ -1.59
SH3D19-204ENST00000427414 A6NED7 52 aa5.14□□□□□ -1.59
SH3D19-204ENST00000427414 SSBP3-AS1Q7Z2R9 100 aa5.13□□□□□ -1.59
SH3D19-204ENST00000427414 FRAS1Q86XX4 4008 aa5.13□□□□□ -1.59
SH3D19-204ENST00000427414 LCA10Q71F78 164 aa5.12□□□□□ -1.59
SH3D19-204ENST00000427414 KTN1-AS1Q86SY8 53 aa5.12□□□□□ -1.59
SH3D19-204ENST00000427414 COA5Q86WW8 74 aa5.12□□□□□ -1.59
SH3D19-204ENST00000427414 A8MWP4 228 aa5.12□□□□□ -1.59
SH3D19-204ENST00000427414 ATP11AUNQ6ZP68 121 aa5.11□□□□□ -1.59
SH3D19-204ENST00000427414 Q75L30 129 aa5.11□□□□□ -1.59
SH3D19-204ENST00000427414 DNAH8Q96JB1 4490 aa5.11□□□□□ -1.59
SH3D19-204ENST00000427414 KMT2AQ03164 3969 aa5.11□□□□□ -1.59
SH3D19-204ENST00000427414 LINC00472Q9H8W2 130 aa5.1□□□□□ -1.59
SH3D19-204ENST00000427414 HECTD4Q9Y4D8 3996 aa5.1□□□□□ -1.59
SH3D19-204ENST00000427414 IGLV7-46A0A075B6I9 117 aa5.1□□□□□ -1.59
SH3D19-204ENST00000427414 LOC101927531A0A1B0GV80 90 aa5.1□□□□□ -1.59
SH3D19-204ENST00000427414 PCOTHQ58A44 107 aa5.1□□□□□ -1.59
SH3D19-204ENST00000427414 SPINK6Q6UWN8 80 aa5.09□□□□□ -1.59
SH3D19-204ENST00000427414 ASB16-AS1Q495Z4 193 aa5.09□□□□□ -1.6
SH3D19-204ENST00000427414 SPAG11AQ6PDA7 123 aa5.08□□□□□ -1.6
SH3D19-204ENST00000427414 MMP24-AS1A0A0U1RRL7 71 aa5.07□□□□□ -1.6
SH3D19-204ENST00000427414 CDC42SE1Q9NRR8 79 aa5.07□□□□□ -1.6
SH3D19-204ENST00000427414 NDUFS5O43920 106 aa5.06□□□□□ -1.6
SH3D19-204ENST00000427414 DNAH11Q96DT5 4516 aa5.06□□□□□ -1.6
SH3D19-204ENST00000427414 A6NN06 94 aa5.06□□□□□ -1.6
SH3D19-204ENST00000427414 PKD1P98161 4303 aa5.05□□□□□ -1.6
SH3D19-204ENST00000427414 KRTAP3-3Q9BYR6 98 aa5.05□□□□□ -1.6
SH3D19-204ENST00000427414 KRTAP3-2Q9BYR7 98 aa5.05□□□□□ -1.6
SH3D19-204ENST00000427414 FAT2Q9NYQ8 4349 aa5.04□□□□□ -1.6
SH3D19-204ENST00000427414 RPS29P62273 56 aaKnown RBP5.04□□□□□ -1.6
SH3D19-204ENST00000427414 LINC01558Q9Y6Z2 57 aa5.04□□□□□ -1.6
SH3D19-204ENST00000427414 CDK2AP2O75956 126 aa5.03□□□□□ -1.6
SH3D19-204ENST00000427414 TP53AIP1Q9HCN2 124 aa5.03□□□□□ -1.6
SH3D19-204ENST00000427414 FAM229AH3BQW9 127 aa5.02□□□□□ -1.61
SH3D19-204ENST00000427414 MOBPQ13875 183 aa5.02□□□□□ -1.61
SH3D19-204ENST00000427414 SRRM2Q9UQ35 2752 aaKnown RBP5.01□□□□□ -1.61
SH3D19-204ENST00000427414 IGLV9-49A0A0B4J1Y8 123 aa5.01□□□□□ -1.61
SH3D19-204ENST00000427414 KRTAP1-4P0C5Y4 121 aa5.01□□□□□ -1.61
SH3D19-204ENST00000427414 SPINK7P58062 85 aa5.01□□□□□ -1.61
SH3D19-204ENST00000427414 DNAH5Q8TE73 4624 aa5.01□□□□□ -1.61
SH3D19-204ENST00000427414 C7orf65Q6ZTY9 151 aa5□□□□□ -1.61
SH3D19-204ENST00000427414 SACSQ9NZJ4 4579 aa5□□□□□ -1.61
SH3D19-204ENST00000427414 PLA2G1BP04054 148 aaKnown RBP5□□□□□ -1.61
SH3D19-204ENST00000427414 HRES1P13985 223 aa5□□□□□ -1.61
SH3D19-204ENST00000427414 KRTAP10-4P60372 401 aaPredicted RBP4.99□□□□□ -1.61
SH3D19-204ENST00000427414 LCE2DQ5TA82 110 aaPredicted RBP4.99□□□□□ -1.61
SH3D19-204ENST00000427414 C8orf17Q9NRJ1 99 aa4.99□□□□□ -1.61
SH3D19-204ENST00000427414 IGHV6-1A0A0B4J1U7 121 aa4.98□□□□□ -1.61
SH3D19-204ENST00000427414 Q96NJ1 140 aa4.98□□□□□ -1.61
SH3D19-204ENST00000427414 HYDINQ4G0P3 5121 aa4.97□□□□□ -1.61
SH3D19-204ENST00000427414 SPINK1P00995 79 aa4.97□□□□□ -1.61
SH3D19-204ENST00000427414 KRTAP13-2Q52LG2 175 aa4.96□□□□□ -1.62
SH3D19-204ENST00000427414 A0A1B0GVX0 72 aa4.95□□□□□ -1.62
SH3D19-204ENST00000427414 MRPL34Q9BQ48 92 aaKnown RBP4.95□□□□□ -1.62
SH3D19-204ENST00000427414 KMT2CQ8NEZ4 4911 aaKnown RBP4.94□□□□□ -1.62
SH3D19-204ENST00000427414 A0A087X002 238 aa4.94□□□□□ -1.62
SH3D19-204ENST00000427414 TYMSOSQ8TAI1 123 aa4.93□□□□□ -1.62
SH3D19-204ENST00000427414 ANAPC11Q9NYG5 84 aa4.92□□□□□ -1.62
SH3D19-204ENST00000427414 RYR2Q92736 4967 aa4.92□□□□□ -1.62
SH3D19-204ENST00000427414 NOTCH2NLQ7Z3S9 236 aa4.91□□□□□ -1.62
SH3D19-204ENST00000427414 LINC00313P59037 77 aa4.9□□□□□ -1.63
SH3D19-204ENST00000427414 DYNC1H1Q14204 4646 aaKnown RBP4.89□□□□□ -1.63
SH3D19-204ENST00000427414 LINC00304Q8N9R0 145 aa4.89□□□□□ -1.63
SH3D19-204ENST00000427414 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
SH3D19-204ENST00000427414 ACYP2P14621 99 aa4.88□□□□□ -1.63
SH3D19-204ENST00000427414 Q5W150 140 aa4.88□□□□□ -1.63
SH3D19-204ENST00000427414 SMR3BP02814 79 aaPredicted RBP4.86□□□□□ -1.63
SH3D19-204ENST00000427414 RYR3Q15413 4870 aa4.86□□□□□ -1.63
SH3D19-204ENST00000427414 LRP1BQ9NZR2 4599 aa4.86□□□□□ -1.63
SH3D19-204ENST00000427414 PKHD1L1Q86WI1 4243 aa4.86□□□□□ -1.63
SH3D19-204ENST00000427414 ADM2Q7Z4H4 148 aa4.85□□□□□ -1.63
SH3D19-204ENST00000427414 Q8N1X5 172 aa4.85□□□□□ -1.63
SH3D19-204ENST00000427414 Q5VSD8 79 aa4.84□□□□□ -1.63
SH3D19-204ENST00000427414 A0A1B0GU69 56 aa4.84□□□□□ -1.63
SH3D19-204ENST00000427414 KRTAP10-8P60410 259 aa4.84□□□□□ -1.63
SH3D19-204ENST00000427414 KRTAP13-3Q3SY46 172 aa4.83□□□□□ -1.64
SH3D19-204ENST00000427414 APOBP04114 4563 aaKnown RBP4.82□□□□□ -1.64
SH3D19-204ENST00000427414 DMAC1Q96GE9 116 aa4.81□□□□□ -1.64
SH3D19-204ENST00000427414 SPATA8Q6RVD6 105 aa4.8□□□□□ -1.64
SH3D19-204ENST00000427414 VPS13BQ7Z7G8 4022 aa4.8□□□□□ -1.64
SH3D19-204ENST00000427414 LINC01554Q52M75 96 aa4.79□□□□□ -1.64
SH3D19-204ENST00000427414 RETNLBQ9BQ08 111 aa4.79□□□□□ -1.64
SH3D19-204ENST00000427414 MIR22HGQ0VDD5 57 aa4.79□□□□□ -1.64
SH3D19-204ENST00000427414 UQCR11O14957 56 aa4.78□□□□□ -1.64
SH3D19-204ENST00000427414 KRTAP16-1A8MUX0 517 aa4.77□□□□□ -1.65
SH3D19-204ENST00000427414 PKHD1P08F94 4074 aa4.77□□□□□ -1.65
SH3D19-204ENST00000427414 IGKV2-30P06310 120 aa4.73□□□□□ -1.65
SH3D19-204ENST00000427414 CSAG1Q6PB30 78 aa4.71□□□□□ -1.65
SH3D19-204ENST00000427414 C20orf166-AS1Q96NR2 134 aa4.71□□□□□ -1.65
SH3D19-204ENST00000427414 A8MUU9 505 aa4.7□□□□□ -1.66
SH3D19-204ENST00000427414 IGKV2D-30A0A075B6S6 120 aa4.7□□□□□ -1.66
SH3D19-204ENST00000427414 MT1HL1P0DM35 61 aa4.69□□□□□ -1.66
SH3D19-204ENST00000427414 EPPK1P58107 5090 aaKnown RBP4.68□□□□□ -1.66
SH3D19-204ENST00000427414 HSPG2P98160 4391 aa4.68□□□□□ -1.66
SH3D19-204ENST00000427414 RYR1P21817 5038 aa4.67□□□□□ -1.66
SH3D19-204ENST00000427414 KRTAP17-1Q9BYP8 105 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 320.5 ms