RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 SPANXA2-OT1Q8N9U9 137 aa11.28□□□□□ -0.6
SNX17-202ENST00000427123 MRPL34Q9BQ48 92 aaKnown RBP11.28□□□□□ -0.6
SNX17-202ENST00000427123 FAT2Q9NYQ8 4349 aa11.28□□□□□ -0.6
SNX17-202ENST00000427123 PRR4Q16378 134 aa11.26□□□□□ -0.61
SNX17-202ENST00000427123 SPINK6Q6UWN8 80 aa11.26□□□□□ -0.61
SNX17-202ENST00000427123 HYDINQ4G0P3 5121 aa11.25□□□□□ -0.61
SNX17-202ENST00000427123 NDUFS5O43920 106 aa11.24□□□□□ -0.61
SNX17-202ENST00000427123 A0A087X002 238 aa11.23□□□□□ -0.61
SNX17-202ENST00000427123 NOTCH2NLQ7Z3S9 236 aa11.23□□□□□ -0.61
SNX17-202ENST00000427123 KRTAP13-2Q52LG2 175 aa11.22□□□□□ -0.61
SNX17-202ENST00000427123 C8orf87E5RJ46 101 aa11.18□□□□□ -0.62
SNX17-202ENST00000427123 MPLKIPQ8TAP9 179 aa11.18□□□□□ -0.62
SNX17-202ENST00000427123 KRTAP1-4P0C5Y4 121 aa11.16□□□□□ -0.62
SNX17-202ENST00000427123 LRP1BQ9NZR2 4599 aa11.15□□□□□ -0.62
SNX17-202ENST00000427123 IGLV7-46A0A075B6I9 117 aa11.12□□□□□ -0.63
SNX17-202ENST00000427123 PCOTHQ58A44 107 aa11.1□□□□□ -0.63
SNX17-202ENST00000427123 C1orf195Q5TG92 126 aa11.1□□□□□ -0.63
SNX17-202ENST00000427123 LIMD2Q9BT23 127 aa11.09□□□□□ -0.63
SNX17-202ENST00000427123 Q1T7F1 81 aa11.09□□□□□ -0.63
SNX17-202ENST00000427123 LOC101927531A0A1B0GV80 90 aa11.06□□□□□ -0.64
SNX17-202ENST00000427123 LINC00313P59037 77 aa11.06□□□□□ -0.64
SNX17-202ENST00000427123 KRTAP13-3Q3SY46 172 aa11.06□□□□□ -0.64
SNX17-202ENST00000427123 LINC00336Q6ZUF6 198 aa11.06□□□□□ -0.64
SNX17-202ENST00000427123 PLA2G1BP04054 148 aaKnown RBP11.04□□□□□ -0.64
SNX17-202ENST00000427123 Q5W150 140 aa11.02□□□□□ -0.64
SNX17-202ENST00000427123 VPS13BQ7Z7G8 4022 aa11.02□□□□□ -0.65
SNX17-202ENST00000427123 SACSQ9NZJ4 4579 aa11.02□□□□□ -0.65
SNX17-202ENST00000427123 TYMSOSQ8TAI1 123 aa11.01□□□□□ -0.65
SNX17-202ENST00000427123 C4orf48Q5BLP8 95 aa11□□□□□ -0.65
SNX17-202ENST00000427123 COA5Q86WW8 74 aa10.99□□□□□ -0.65
SNX17-202ENST00000427123 Q8N9P0 234 aaPredicted RBP10.99□□□□□ -0.65
SNX17-202ENST00000427123 V9GYY9 64 aa10.99□□□□□ -0.65
SNX17-202ENST00000427123 SPINK1P00995 79 aa10.97□□□□□ -0.65
SNX17-202ENST00000427123 FAM229AH3BQW9 127 aa10.96□□□□□ -0.66
SNX17-202ENST00000427123 KRTAP16-1A8MUX0 517 aa10.94□□□□□ -0.66
SNX17-202ENST00000427123 A0A1B0GVY2 172 aa10.93□□□□□ -0.66
SNX17-202ENST00000427123 PRO0628Q9UI54 55 aa10.93□□□□□ -0.66
SNX17-202ENST00000427123 PKHD1P08F94 4074 aa10.92□□□□□ -0.66
SNX17-202ENST00000427123 RPS29P62273 56 aaKnown RBP10.89□□□□□ -0.67
SNX17-202ENST00000427123 BRK1Q8WUW1 75 aa10.89□□□□□ -0.67
SNX17-202ENST00000427123 PSPHP1O15172 72 aa10.88□□□□□ -0.67
SNX17-202ENST00000427123 PRR26Q8N8Z3 221 aa10.87□□□□□ -0.67
SNX17-202ENST00000427123 LINC00304Q8N9R0 145 aa10.87□□□□□ -0.67
SNX17-202ENST00000427123 SMR3BP02814 79 aaPredicted RBP10.85□□□□□ -0.67
SNX17-202ENST00000427123 HRES1P13985 223 aa10.85□□□□□ -0.67
SNX17-202ENST00000427123 SPAG11AQ6PDA7 123 aa10.85□□□□□ -0.67
SNX17-202ENST00000427123 DYNC1H1Q14204 4646 aaKnown RBP10.85□□□□□ -0.67
SNX17-202ENST00000427123 A8MUN3 132 aa10.83□□□□□ -0.68
SNX17-202ENST00000427123 IGKV2-30P06310 120 aa10.82□□□□□ -0.68
SNX17-202ENST00000427123 RETNLBQ9BQ08 111 aa10.82□□□□□ -0.68
SNX17-202ENST00000427123 KRTAP10-4P60372 401 aaPredicted RBP10.79□□□□□ -0.68
SNX17-202ENST00000427123 Q5VV11 94 aa10.78□□□□□ -0.68
SNX17-202ENST00000427123 PRR15LQ9BU68 103 aa10.76□□□□□ -0.69
SNX17-202ENST00000427123 APOBP04114 4563 aaKnown RBP10.75□□□□□ -0.69
SNX17-202ENST00000427123 ACYP2P14621 99 aa10.74□□□□□ -0.69
SNX17-202ENST00000427123 DMAC1Q96GE9 116 aa10.74□□□□□ -0.69
SNX17-202ENST00000427123 RYR2Q92736 4967 aa10.72□□□□□ -0.69
SNX17-202ENST00000427123 LINC01558Q9Y6Z2 57 aa10.71□□□□□ -0.69
SNX17-202ENST00000427123 Q75L30 129 aa10.68□□□□□ -0.7
SNX17-202ENST00000427123 PKHD1L1Q86WI1 4243 aa10.67□□□□□ -0.7
SNX17-202ENST00000427123 IGKV2D-30A0A075B6S6 120 aa10.67□□□□□ -0.7
SNX17-202ENST00000427123 CHKB-CPT1BH3BT56 60 aa10.67□□□□□ -0.7
SNX17-202ENST00000427123 FAT1Q14517 4588 aa10.62□□□□□ -0.71
SNX17-202ENST00000427123 C7orf65Q6ZTY9 151 aa10.58□□□□□ -0.72
SNX17-202ENST00000427123 A6NED7 52 aa10.54□□□□□ -0.72
SNX17-202ENST00000427123 C20orf166-AS1Q96NR2 134 aa10.54□□□□□ -0.72
SNX17-202ENST00000427123 C9orf92A6NGG3 77 aa10.53□□□□□ -0.72
SNX17-202ENST00000427123 A8MUU9 505 aa10.53□□□□□ -0.72
SNX17-202ENST00000427123 KMT2CQ8NEZ4 4911 aaKnown RBP10.51□□□□□ -0.73
SNX17-202ENST00000427123 A8MU10 97 aa10.46□□□□□ -0.73
SNX17-202ENST00000427123 LCA10Q71F78 164 aa10.44□□□□□ -0.74
SNX17-202ENST00000427123 CDC42SE1Q9NRR8 79 aa10.43□□□□□ -0.74
SNX17-202ENST00000427123 Q5VSD8 79 aa10.41□□□□□ -0.74
SNX17-202ENST00000427123 SPINK7P58062 85 aa10.4□□□□□ -0.74
SNX17-202ENST00000427123 Q8N1X5 172 aa10.38□□□□□ -0.75
SNX17-202ENST00000427123 FLG2Q5D862 2391 aaPredicted RBP10.37□□□□□ -0.75
SNX17-202ENST00000427123 A0A1B0GU69 56 aa10.37□□□□□ -0.75
SNX17-202ENST00000427123 KRTAP10-8P60410 259 aa10.37□□□□□ -0.75
SNX17-202ENST00000427123 ATP11AUNQ6ZP68 121 aa10.34□□□□□ -0.75
SNX17-202ENST00000427123 RYR3Q15413 4870 aa10.33□□□□□ -0.76
SNX17-202ENST00000427123 HSPG2P98160 4391 aa10.33□□□□□ -0.76
SNX17-202ENST00000427123 TNXBP22105 4242 aa10.3□□□□□ -0.76
SNX17-202ENST00000427123 SPTSSBQ8NFR3 76 aa10.3□□□□□ -0.76
SNX17-202ENST00000427123 PMAIP1Q13794 54 aa10.28□□□□□ -0.76
SNX17-202ENST00000427123 FAT3Q8TDW7 4589 aa10.26□□□□□ -0.77
SNX17-202ENST00000427123 RYR1P21817 5038 aa10.22□□□□□ -0.77
SNX17-202ENST00000427123 LRP1Q07954 4544 aaKnown RBP10.21□□□□□ -0.78
SNX17-202ENST00000427123 KRTAP3-1Q9BYR8 98 aa10.2□□□□□ -0.78
SNX17-202ENST00000427123 KRTAP17-1Q9BYP8 105 aa10.16□□□□□ -0.78
SNX17-202ENST00000427123 A6NN06 94 aa10.16□□□□□ -0.78
SNX17-202ENST00000427123 UQCR11O14957 56 aa10.15□□□□□ -0.78
SNX17-202ENST00000427123 RPL37P61927 97 aaKnown RBP10.14□□□□□ -0.79
SNX17-202ENST00000427123 SPATA8Q6RVD6 105 aa10.14□□□□□ -0.79
SNX17-202ENST00000427123 COX6B2Q6YFQ2 88 aa10.13□□□□□ -0.79
SNX17-202ENST00000427123 SEC61GP60059 68 aa10.12□□□□□ -0.79
SNX17-202ENST00000427123 MIR22HGQ0VDD5 57 aa10.1□□□□□ -0.79
SNX17-202ENST00000427123 XP32Q5T750 250 aa10.09□□□□□ -0.79
SNX17-202ENST00000427123 MT1HL1P0DM35 61 aa10.09□□□□□ -0.79
SNX17-202ENST00000427123 KTN1-AS1Q86SY8 53 aa10.05□□□□□ -0.8
SNX17-202ENST00000427123 KIAA1109Q2LD37 5005 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms