RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 IGHV6-1A0A0B4J1U7 121 aa9.5□□□□□ -0.89
HERC3-205ENST00000426683 A0A1B0GW54 56 aa9.5□□□□□ -0.89
HERC3-205ENST00000426683 NOTCH2NLQ7Z3S9 236 aa9.49□□□□□ -0.89
HERC3-205ENST00000426683 KRTAP16-1A8MUX0 517 aa9.47□□□□□ -0.89
HERC3-205ENST00000426683 J3KT08 172 aa9.47□□□□□ -0.89
HERC3-205ENST00000426683 A0A1B0GVX0 72 aa9.46□□□□□ -0.9
HERC3-205ENST00000426683 KRTAP19-2Q3LHN2 52 aa9.46□□□□□ -0.9
HERC3-205ENST00000426683 LCE2CQ5TA81 110 aa9.45□□□□□ -0.9
HERC3-205ENST00000426683 PCP4L1A6NKN8 68 aa9.44□□□□□ -0.9
HERC3-205ENST00000426683 C8orf87E5RJ46 101 aa9.43□□□□□ -0.9
HERC3-205ENST00000426683 NDUFB1O75438 58 aa9.39□□□□□ -0.91
HERC3-205ENST00000426683 SMCPP49901 116 aaPredicted RBP9.39□□□□□ -0.91
HERC3-205ENST00000426683 NREPQ16612 68 aa9.39□□□□□ -0.91
HERC3-205ENST00000426683 K7EP34 96 aa9.38□□□□□ -0.91
HERC3-205ENST00000426683 A8MWP4 228 aa9.37□□□□□ -0.91
HERC3-205ENST00000426683 COX6B2Q6YFQ2 88 aa9.35□□□□□ -0.91
HERC3-205ENST00000426683 MT1HP80294 61 aa9.34□□□□□ -0.91
HERC3-205ENST00000426683 PRO0461Q9UI25 63 aa9.34□□□□□ -0.91
HERC3-205ENST00000426683 IGKV3D-7A0A0C4DH55 119 aa9.33□□□□□ -0.92
HERC3-205ENST00000426683 C8orf17Q9NRJ1 99 aa9.32□□□□□ -0.92
HERC3-205ENST00000426683 GTF2H5Q6ZYL4 71 aa9.29□□□□□ -0.92
HERC3-205ENST00000426683 PRR15Q8IV56 129 aa9.29□□□□□ -0.92
HERC3-205ENST00000426683 Q8N9P0 234 aaPredicted RBP9.26□□□□□ -0.93
HERC3-205ENST00000426683 BPY2O14599 106 aa9.24□□□□□ -0.93
HERC3-205ENST00000426683 Q6ZVQ6 151 aa9.24□□□□□ -0.93
HERC3-205ENST00000426683 K7EQZ3 153 aa9.23□□□□□ -0.93
HERC3-205ENST00000426683 ZCCHC13Q8WW36 166 aaKnown RBP9.23□□□□□ -0.93
HERC3-205ENST00000426683 MMP24-AS1A0A0U1RRL7 71 aa9.21□□□□□ -0.94
HERC3-205ENST00000426683 F8W1H4 67 aa9.21□□□□□ -0.94
HERC3-205ENST00000426683 M0R2T5 61 aa9.19□□□□□ -0.94
HERC3-205ENST00000426683 TMEM254Q8TBM7 123 aa9.18□□□□□ -0.94
HERC3-205ENST00000426683 MRPL34Q9BQ48 92 aaKnown RBP9.18□□□□□ -0.94
HERC3-205ENST00000426683 FLGP20930 4061 aaPredicted RBP9.18□□□□□ -0.94
HERC3-205ENST00000426683 LINC00846Q9NV44 126 aa9.17□□□□□ -0.94
HERC3-205ENST00000426683 KRTAP9-2Q9BYQ4 174 aa9.16□□□□□ -0.94
HERC3-205ENST00000426683 hDV103S1A0JD37 113 aa9.15□□□□□ -0.94
HERC3-205ENST00000426683 HRES1P13985 223 aa9.15□□□□□ -0.94
HERC3-205ENST00000426683 ETDBQ3ZM63 59 aa9.15□□□□□ -0.94
HERC3-205ENST00000426683 UBL5Q9BZL1 73 aa9.15□□□□□ -0.94
HERC3-205ENST00000426683 Q8N9L7 120 aa9.14□□□□□ -0.95
HERC3-205ENST00000426683 KRTAP10-6P60371 365 aaPredicted RBP9.12□□□□□ -0.95
HERC3-205ENST00000426683 FAM236DA0A1B0GTK5 79 aa9.11□□□□□ -0.95
HERC3-205ENST00000426683 FAM236CP0DP71 79 aa9.11□□□□□ -0.95
HERC3-205ENST00000426683 SPINK7P58062 85 aa9.11□□□□□ -0.95
HERC3-205ENST00000426683 RBM12B-AS1Q9P1G2 102 aa9.11□□□□□ -0.95
HERC3-205ENST00000426683 NDUFS5O43920 106 aa9.1□□□□□ -0.95
HERC3-205ENST00000426683 LORP23490 312 aaPredicted RBP9.1□□□□□ -0.95
HERC3-205ENST00000426683 MPLKIPQ8TAP9 179 aa9.1□□□□□ -0.95
HERC3-205ENST00000426683 WFDC13Q8IUB5 93 aa9.09□□□□□ -0.95
HERC3-205ENST00000426683 CASC2Q6XLA1 102 aa9.06□□□□□ -0.96
HERC3-205ENST00000426683 LCE2DQ5TA82 110 aaPredicted RBP9.01□□□□□ -0.97
HERC3-205ENST00000426683 HCG22E2RYF7 251 aa9□□□□□ -0.97
HERC3-205ENST00000426683 Q5W150 140 aa8.97□□□□□ -0.97
HERC3-205ENST00000426683 CXCL6P80162 114 aa8.96□□□□□ -0.98
HERC3-205ENST00000426683 ACYP1P07311 99 aa8.93□□□□□ -0.98
HERC3-205ENST00000426683 A0A1B0GV90 55 aa8.92□□□□□ -0.98
HERC3-205ENST00000426683 IGKV2D-30A0A075B6S6 120 aa8.91□□□□□ -0.98
HERC3-205ENST00000426683 IGKV2-30P06310 120 aa8.91□□□□□ -0.98
HERC3-205ENST00000426683 FAM240AA0A1B0GVK7 77 aa8.89□□□□□ -0.99
HERC3-205ENST00000426683 C7orf65Q6ZTY9 151 aa8.89□□□□□ -0.99
HERC3-205ENST00000426683 KRTAP9-8Q9BYQ0 159 aa8.85□□□□□ -0.99
HERC3-205ENST00000426683 TP53AIP1Q9HCN2 124 aa8.81□□□□□ -1
HERC3-205ENST00000426683 ATP5EP2Q5VTU8 51 aa8.8□□□□□ -1
HERC3-205ENST00000426683 KRTAP9-6A0A140TA67 174 aa8.79□□□□□ -1
HERC3-205ENST00000426683 MT2AP02795 61 aa8.76□□□□□ -1.01
HERC3-205ENST00000426683 H1FX-AS1Q4G0G2 97 aa8.76□□□□□ -1.01
HERC3-205ENST00000426683 FSIP2Q5CZC0 6907 aa8.76□□□□□ -1.01
HERC3-205ENST00000426683 HIST1H4AP62805 103 aaKnown RBP8.75□□□□□ -1.01
HERC3-205ENST00000426683 C4orf26Q17RF5 130 aa8.73□□□□□ -1.01
HERC3-205ENST00000426683 LINC00643Q86TS7 51 aa8.73□□□□□ -1.01
HERC3-205ENST00000426683 MT1FP04733 61 aa8.69□□□□□ -1.02
HERC3-205ENST00000426683 CRCT1Q9UGL9 99 aa8.69□□□□□ -1.02
HERC3-205ENST00000426683 KRTAP10-10P60014 251 aa8.66□□□□□ -1.02
HERC3-205ENST00000426683 A0A087WVE0 104 aa8.65□□□□□ -1.02
HERC3-205ENST00000426683 TRAV22A0A0B4J277 110 aa8.64□□□□□ -1.03
HERC3-205ENST00000426683 J3QR89 54 aa8.64□□□□□ -1.03
HERC3-205ENST00000426683 C1orf64Q8NEQ6 169 aa8.6□□□□□ -1.03
HERC3-205ENST00000426683 KRTAP3-1Q9BYR8 98 aa8.6□□□□□ -1.03
HERC3-205ENST00000426683 CYP4F30PQ9H0H9 118 aa8.6□□□□□ -1.03
HERC3-205ENST00000426683 UQCRQO14949 82 aa8.59□□□□□ -1.03
HERC3-205ENST00000426683 LOC101927531A0A1B0GV80 90 aa8.58□□□□□ -1.04
HERC3-205ENST00000426683 KRTAP9-3Q9BYQ3 159 aa8.56□□□□□ -1.04
HERC3-205ENST00000426683 H0Y9P7 68 aa8.54□□□□□ -1.04
HERC3-205ENST00000426683 USH2AO75445 5202 aa8.52□□□□□ -1.04
HERC3-205ENST00000426683 ATOX1O00244 68 aa8.52□□□□□ -1.05
HERC3-205ENST00000426683 S4R3F8 94 aa8.51□□□□□ -1.05
HERC3-205ENST00000426683 LCE2BO14633 110 aa8.49□□□□□ -1.05
HERC3-205ENST00000426683 C5orf47Q569G3 176 aa8.49□□□□□ -1.05
HERC3-205ENST00000426683 OCR1Q9BZK8 76 aa8.46□□□□□ -1.06
HERC3-205ENST00000426683 LCA10Q71F78 164 aa8.45□□□□□ -1.06
HERC3-205ENST00000426683 SSPOA2VEC9 5147 aa8.42□□□□□ -1.06
HERC3-205ENST00000426683 CSAG1Q6PB30 78 aa8.42□□□□□ -1.06
HERC3-205ENST00000426683 LINC00208Q96KT6 92 aa8.42□□□□□ -1.06
HERC3-205ENST00000426683 MP68P56378 58 aa8.41□□□□□ -1.06
HERC3-205ENST00000426683 K7ERU9 68 aa8.38□□□□□ -1.07
HERC3-205ENST00000426683 SCGB1A1P11684 91 aa8.38□□□□□ -1.07
HERC3-205ENST00000426683 KLKP1Q107X0 134 aa8.36□□□□□ -1.07
HERC3-205ENST00000426683 KRTAP3-3Q9BYR6 98 aa8.35□□□□□ -1.07
HERC3-205ENST00000426683 MT-ATP8P03928 68 aa8.33□□□□□ -1.08
HERC3-205ENST00000426683 IMUPQ9GZP8 106 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms