RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 SPINK1P00995 79 aa8.32□□□□□ -1.08
CDK3-201ENST00000425876 OCR1Q9BZK8 76 aa8.32□□□□□ -1.08
CDK3-201ENST00000425876 A0A1B0GVX0 72 aa8.31□□□□□ -1.08
CDK3-201ENST00000425876 RPS29P62273 56 aaKnown RBP8.31□□□□□ -1.08
CDK3-201ENST00000425876 SPAG11AQ6PDA7 123 aa8.31□□□□□ -1.08
CDK3-201ENST00000425876 MMP24-AS1A0A0U1RRL7 71 aa8.29□□□□□ -1.08
CDK3-201ENST00000425876 Q5VSD8 79 aa8.29□□□□□ -1.08
CDK3-201ENST00000425876 CASC2Q6XLA1 102 aa8.29□□□□□ -1.08
CDK3-201ENST00000425876 LINC00304Q8N9R0 145 aa8.29□□□□□ -1.08
CDK3-201ENST00000425876 WFDC13Q8IUB5 93 aa8.28□□□□□ -1.08
CDK3-201ENST00000425876 C1orf195Q5TG92 126 aa8.27□□□□□ -1.09
CDK3-201ENST00000425876 C8orf17Q9NRJ1 99 aa8.27□□□□□ -1.09
CDK3-201ENST00000425876 IGHV6-1A0A0B4J1U7 121 aa8.25□□□□□ -1.09
CDK3-201ENST00000425876 hDV103S1A0JD37 113 aa8.25□□□□□ -1.09
CDK3-201ENST00000425876 C8orf87E5RJ46 101 aa8.22□□□□□ -1.09
CDK3-201ENST00000425876 C20orf197Q8N268 126 aa8.22□□□□□ -1.09
CDK3-201ENST00000425876 KLKP1Q107X0 134 aa8.21□□□□□ -1.1
CDK3-201ENST00000425876 TMEM254Q8TBM7 123 aa8.2□□□□□ -1.1
CDK3-201ENST00000425876 C5orf47Q569G3 176 aa8.18□□□□□ -1.1
CDK3-201ENST00000425876 NOTCH2NLQ7Z3S9 236 aa8.18□□□□□ -1.1
CDK3-201ENST00000425876 MRPL34Q9BQ48 92 aaKnown RBP8.18□□□□□ -1.1
CDK3-201ENST00000425876 TP53AIP1Q9HCN2 124 aa8.16□□□□□ -1.1
CDK3-201ENST00000425876 A0A0U1RQV1 116 aa8.15□□□□□ -1.1
CDK3-201ENST00000425876 KRTAP10-8P60410 259 aa8.15□□□□□ -1.1
CDK3-201ENST00000425876 CYSTM1Q9H1C7 97 aa8.15□□□□□ -1.1
CDK3-201ENST00000425876 LINC00313P59037 77 aa8.14□□□□□ -1.11
CDK3-201ENST00000425876 NDUFC1O43677 76 aa8.13□□□□□ -1.11
CDK3-201ENST00000425876 SNURFQ9Y675 71 aa8.13□□□□□ -1.11
CDK3-201ENST00000425876 TNXBP22105 4242 aa8.11□□□□□ -1.11
CDK3-201ENST00000425876 MP68P56378 58 aa8.11□□□□□ -1.11
CDK3-201ENST00000425876 MYCBP2O75592 4640 aa8.11□□□□□ -1.11
CDK3-201ENST00000425876 H3BPC8 53 aa8.1□□□□□ -1.11
CDK3-201ENST00000425876 HERC1Q15751 4861 aa8.1□□□□□ -1.11
CDK3-201ENST00000425876 H7BZZ5 65 aa8.09□□□□□ -1.11
CDK3-201ENST00000425876 TMEM258P61165 79 aa8.09□□□□□ -1.11
CDK3-201ENST00000425876 ZCCHC13Q8WW36 166 aaKnown RBP8.09□□□□□ -1.11
CDK3-201ENST00000425876 FAT3Q8TDW7 4589 aa8.08□□□□□ -1.12
CDK3-201ENST00000425876 TRAV22A0A0B4J277 110 aa8.08□□□□□ -1.12
CDK3-201ENST00000425876 H0Y9P7 68 aa8.08□□□□□ -1.12
CDK3-201ENST00000425876 LRP1Q07954 4544 aaKnown RBP8.07□□□□□ -1.12
CDK3-201ENST00000425876 NDUFS5O43920 106 aa8.07□□□□□ -1.12
CDK3-201ENST00000425876 Q8N9P0 234 aaPredicted RBP8.07□□□□□ -1.12
CDK3-201ENST00000425876 DMBT1Q9UGM3 2413 aaPredicted RBP8.07□□□□□ -1.12
CDK3-201ENST00000425876 KRTAP16-1A8MUX0 517 aa8.06□□□□□ -1.12
CDK3-201ENST00000425876 FLG2Q5D862 2391 aaPredicted RBP8.06□□□□□ -1.12
CDK3-201ENST00000425876 LINC00208Q96KT6 92 aa8.03□□□□□ -1.12
CDK3-201ENST00000425876 MT1HL1P0DM35 61 aa8□□□□□ -1.13
CDK3-201ENST00000425876 C1orf64Q8NEQ6 169 aa8□□□□□ -1.13
CDK3-201ENST00000425876 OXTP01178 125 aa7.99□□□□□ -1.13
CDK3-201ENST00000425876 KRTAP13-3Q3SY46 172 aa7.99□□□□□ -1.13
CDK3-201ENST00000425876 FAM236DA0A1B0GTK5 79 aa7.97□□□□□ -1.13
CDK3-201ENST00000425876 FAM236CP0DP71 79 aa7.97□□□□□ -1.13
CDK3-201ENST00000425876 ATP5EP56381 51 aaPredicted RBP7.97□□□□□ -1.13
CDK3-201ENST00000425876 Q5W150 140 aa7.96□□□□□ -1.14
CDK3-201ENST00000425876 FP248Q71RG6 208 aaPredicted RBP7.96□□□□□ -1.14
CDK3-201ENST00000425876 RETNLBQ9BQ08 111 aa7.96□□□□□ -1.14
CDK3-201ENST00000425876 LOC101927531A0A1B0GV80 90 aa7.93□□□□□ -1.14
CDK3-201ENST00000425876 J3QL48 77 aa7.93□□□□□ -1.14
CDK3-201ENST00000425876 C20orf166-AS1Q96NR2 134 aa7.91□□□□□ -1.14
CDK3-201ENST00000425876 A8MUU9 505 aa7.89□□□□□ -1.15
CDK3-201ENST00000425876 RPS28P62857 69 aaKnown RBP7.89□□□□□ -1.15
CDK3-201ENST00000425876 SPANXA2-OT1Q8N9U9 137 aa7.89□□□□□ -1.15
CDK3-201ENST00000425876 C9orf92A6NGG3 77 aa7.88□□□□□ -1.15
CDK3-201ENST00000425876 CYP4F30PQ9H0H9 118 aa7.86□□□□□ -1.15
CDK3-201ENST00000425876 IGLV7-46A0A075B6I9 117 aa7.84□□□□□ -1.15
CDK3-201ENST00000425876 IGKV2-30P06310 120 aa7.84□□□□□ -1.15
CDK3-201ENST00000425876 SERP1Q9Y6X1 66 aa7.84□□□□□ -1.15
CDK3-201ENST00000425876 Q75L30 129 aa7.83□□□□□ -1.16
CDK3-201ENST00000425876 PCOTHQ58A44 107 aa7.82□□□□□ -1.16
CDK3-201ENST00000425876 HMCN2Q8NDA2 5059 aa7.8□□□□□ -1.16
CDK3-201ENST00000425876 PRR4Q16378 134 aa7.75□□□□□ -1.17
CDK3-201ENST00000425876 IGKV2D-30A0A075B6S6 120 aa7.74□□□□□ -1.17
CDK3-201ENST00000425876 C7orf65Q6ZTY9 151 aa7.74□□□□□ -1.17
CDK3-201ENST00000425876 HRES1P13985 223 aa7.71□□□□□ -1.17
CDK3-201ENST00000425876 RPL37P61927 97 aaKnown RBP7.71□□□□□ -1.17
CDK3-201ENST00000425876 XP32Q5T750 250 aa7.71□□□□□ -1.17
CDK3-201ENST00000425876 TPRXLQ17RH7 258 aa7.71□□□□□ -1.18
CDK3-201ENST00000425876 ATP11AUNQ6ZP68 121 aa7.67□□□□□ -1.18
CDK3-201ENST00000425876 UBR4Q5T4S7 5183 aa7.66□□□□□ -1.18
CDK3-201ENST00000425876 SMIM26A0A096LP01 95 aa7.65□□□□□ -1.18
CDK3-201ENST00000425876 DMAC1Q96GE9 116 aa7.64□□□□□ -1.19
CDK3-201ENST00000425876 SPINK7P58062 85 aa7.63□□□□□ -1.19
CDK3-201ENST00000425876 ACYP2P14621 99 aa7.62□□□□□ -1.19
CDK3-201ENST00000425876 COA5Q86WW8 74 aa7.62□□□□□ -1.19
CDK3-201ENST00000425876 A8MUN3 132 aa7.56□□□□□ -1.2
CDK3-201ENST00000425876 LRP2P98164 4655 aa7.53□□□□□ -1.2
CDK3-201ENST00000425876 C4orf26Q17RF5 130 aa7.53□□□□□ -1.2
CDK3-201ENST00000425876 LPAP08519 4548 aa7.49□□□□□ -1.21
CDK3-201ENST00000425876 Q1T7F1 81 aa7.49□□□□□ -1.21
CDK3-201ENST00000425876 COX6B2Q6YFQ2 88 aa7.47□□□□□ -1.21
CDK3-201ENST00000425876 V9GYY9 64 aa7.47□□□□□ -1.21
CDK3-201ENST00000425876 CHKB-CPT1BH3BT56 60 aa7.46□□□□□ -1.21
CDK3-201ENST00000425876 KRTAP3-1Q9BYR8 98 aa7.46□□□□□ -1.22
CDK3-201ENST00000425876 MPLKIPQ8TAP9 179 aa7.45□□□□□ -1.22
CDK3-201ENST00000425876 SEC61BP60468 96 aaKnown RBP7.43□□□□□ -1.22
CDK3-201ENST00000425876 RNF213Q63HN8 5207 aa7.42□□□□□ -1.22
CDK3-201ENST00000425876 LINC01558Q9Y6Z2 57 aa7.37□□□□□ -1.23
CDK3-201ENST00000425876 SPTSSBQ8NFR3 76 aa7.33□□□□□ -1.24
CDK3-201ENST00000425876 MUC17Q685J3 4493 aa7.32□□□□□ -1.24
CDK3-201ENST00000425876 RBM12B-AS1Q9P1G2 102 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 776.2 ms