RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 BATFQ16520 125 aa9.56□□□□□ -0.88
MSH5-207ENST00000425703 C8orf87E5RJ46 101 aa9.55□□□□□ -0.88
MSH5-207ENST00000425703 NOTCH2NLQ7Z3S9 236 aa9.55□□□□□ -0.88
MSH5-207ENST00000425703 A0A1B0GVX0 72 aa9.54□□□□□ -0.88
MSH5-207ENST00000425703 C9orf118A6NHY6 69 aa9.51□□□□□ -0.89
MSH5-207ENST00000425703 LCE2DQ5TA82 110 aaPredicted RBP9.51□□□□□ -0.89
MSH5-207ENST00000425703 FLGP20930 4061 aaPredicted RBP9.51□□□□□ -0.89
MSH5-207ENST00000425703 M0R2T5 61 aa9.49□□□□□ -0.89
MSH5-207ENST00000425703 C14orf132Q9NPU4 83 aa9.49□□□□□ -0.89
MSH5-207ENST00000425703 LORP23490 312 aaPredicted RBP9.48□□□□□ -0.89
MSH5-207ENST00000425703 KRTAP10-6P60371 365 aaPredicted RBP9.48□□□□□ -0.89
MSH5-207ENST00000425703 TAX1BP3O14907 124 aa9.47□□□□□ -0.89
MSH5-207ENST00000425703 NDUFB1O75438 58 aa9.47□□□□□ -0.89
MSH5-207ENST00000425703 A0A1W2PPM0 123 aa9.46□□□□□ -0.9
MSH5-207ENST00000425703 H3BT86 120 aa9.46□□□□□ -0.9
MSH5-207ENST00000425703 A8MWP4 228 aa9.43□□□□□ -0.9
MSH5-207ENST00000425703 NREPQ16612 68 aa9.38□□□□□ -0.91
MSH5-207ENST00000425703 Q8N9P0 234 aaPredicted RBP9.38□□□□□ -0.91
MSH5-207ENST00000425703 IGKV3D-7A0A0C4DH55 119 aa9.37□□□□□ -0.91
MSH5-207ENST00000425703 C8orf17Q9NRJ1 99 aa9.37□□□□□ -0.91
MSH5-207ENST00000425703 ZCCHC13Q8WW36 166 aaKnown RBP9.36□□□□□ -0.91
MSH5-207ENST00000425703 KRTAP9-6A0A140TA67 174 aa9.35□□□□□ -0.91
MSH5-207ENST00000425703 MPLKIPQ8TAP9 179 aa9.35□□□□□ -0.91
MSH5-207ENST00000425703 PRR15Q8IV56 129 aa9.34□□□□□ -0.91
MSH5-207ENST00000425703 HRES1P13985 223 aa9.33□□□□□ -0.92
MSH5-207ENST00000425703 MTURNQ8N3F0 131 aa9.33□□□□□ -0.92
MSH5-207ENST00000425703 SPCS1Q9Y6A9 102 aa9.33□□□□□ -0.92
MSH5-207ENST00000425703 RBM12B-AS1Q9P1G2 102 aa9.32□□□□□ -0.92
MSH5-207ENST00000425703 COL5A1-AS1Q5SY13 56 aa9.3□□□□□ -0.92
MSH5-207ENST00000425703 Q6ZVQ6 151 aa9.3□□□□□ -0.92
MSH5-207ENST00000425703 FAM236DA0A1B0GTK5 79 aa9.28□□□□□ -0.92
MSH5-207ENST00000425703 FAM236CP0DP71 79 aa9.28□□□□□ -0.92
MSH5-207ENST00000425703 SPINK7P58062 85 aa9.25□□□□□ -0.93
MSH5-207ENST00000425703 TMEM254Q8TBM7 123 aa9.25□□□□□ -0.93
MSH5-207ENST00000425703 MMP24-AS1A0A0U1RRL7 71 aa9.24□□□□□ -0.93
MSH5-207ENST00000425703 SMCPP49901 116 aaPredicted RBP9.24□□□□□ -0.93
MSH5-207ENST00000425703 K7EQZ3 153 aa9.22□□□□□ -0.93
MSH5-207ENST00000425703 MRPL34Q9BQ48 92 aaKnown RBP9.22□□□□□ -0.93
MSH5-207ENST00000425703 BPY2O14599 106 aa9.21□□□□□ -0.94
MSH5-207ENST00000425703 hDV103S1A0JD37 113 aa9.2□□□□□ -0.94
MSH5-207ENST00000425703 CRCT1Q9UGL9 99 aa9.2□□□□□ -0.94
MSH5-207ENST00000425703 PRO0461Q9UI25 63 aa9.2□□□□□ -0.94
MSH5-207ENST00000425703 K7EP34 96 aa9.19□□□□□ -0.94
MSH5-207ENST00000425703 KRTAP9-8Q9BYQ0 159 aa9.17□□□□□ -0.94
MSH5-207ENST00000425703 FSIP2Q5CZC0 6907 aa9.15□□□□□ -0.95
MSH5-207ENST00000425703 GTF2H5Q6ZYL4 71 aa9.11□□□□□ -0.95
MSH5-207ENST00000425703 NDUFS5O43920 106 aa9.1□□□□□ -0.95
MSH5-207ENST00000425703 WFDC13Q8IUB5 93 aa9.1□□□□□ -0.95
MSH5-207ENST00000425703 UBL5Q9BZL1 73 aa9.1□□□□□ -0.95
MSH5-207ENST00000425703 LINC00846Q9NV44 126 aa9.09□□□□□ -0.95
MSH5-207ENST00000425703 CASC2Q6XLA1 102 aa9.07□□□□□ -0.96
MSH5-207ENST00000425703 Q8N9L7 120 aa9.07□□□□□ -0.96
MSH5-207ENST00000425703 F8W1H4 67 aa9.06□□□□□ -0.96
MSH5-207ENST00000425703 MT2AP02795 61 aa9.04□□□□□ -0.96
MSH5-207ENST00000425703 PCP4L1A6NKN8 68 aa9.03□□□□□ -0.96
MSH5-207ENST00000425703 Q5W150 140 aa9.01□□□□□ -0.97
MSH5-207ENST00000425703 HCG22E2RYF7 251 aa8.99□□□□□ -0.97
MSH5-207ENST00000425703 CXCL6P80162 114 aa8.99□□□□□ -0.97
MSH5-207ENST00000425703 C7orf65Q6ZTY9 151 aa8.98□□□□□ -0.97
MSH5-207ENST00000425703 ETDBQ3ZM63 59 aa8.97□□□□□ -0.97
MSH5-207ENST00000425703 IGKV2D-30A0A075B6S6 120 aa8.96□□□□□ -0.98
MSH5-207ENST00000425703 MT1FP04733 61 aa8.96□□□□□ -0.98
MSH5-207ENST00000425703 IGKV2-30P06310 120 aa8.96□□□□□ -0.98
MSH5-207ENST00000425703 H1FX-AS1Q4G0G2 97 aa8.93□□□□□ -0.98
MSH5-207ENST00000425703 KRTAP10-10P60014 251 aa8.92□□□□□ -0.98
MSH5-207ENST00000425703 KRTAP9-3Q9BYQ3 159 aa8.89□□□□□ -0.99
MSH5-207ENST00000425703 TP53AIP1Q9HCN2 124 aa8.85□□□□□ -0.99
MSH5-207ENST00000425703 USH2AO75445 5202 aa8.85□□□□□ -0.99
MSH5-207ENST00000425703 ACYP1P07311 99 aa8.83□□□□□ -1
MSH5-207ENST00000425703 LCE2BO14633 110 aa8.8□□□□□ -1
MSH5-207ENST00000425703 C4orf26Q17RF5 130 aa8.8□□□□□ -1
MSH5-207ENST00000425703 FAM240AA0A1B0GVK7 77 aa8.79□□□□□ -1
MSH5-207ENST00000425703 SSPOA2VEC9 5147 aa8.77□□□□□ -1.01
MSH5-207ENST00000425703 ATP5EP2Q5VTU8 51 aa8.74□□□□□ -1.01
MSH5-207ENST00000425703 KRTAP3-1Q9BYR8 98 aa8.69□□□□□ -1.02
MSH5-207ENST00000425703 C1orf64Q8NEQ6 169 aa8.67□□□□□ -1.02
MSH5-207ENST00000425703 TRAV22A0A0B4J277 110 aa8.63□□□□□ -1.03
MSH5-207ENST00000425703 CYP4F30PQ9H0H9 118 aa8.63□□□□□ -1.03
MSH5-207ENST00000425703 KRTAP19-1Q8IUB9 90 aa8.62□□□□□ -1.03
MSH5-207ENST00000425703 LOC101927531A0A1B0GV80 90 aa8.61□□□□□ -1.03
MSH5-207ENST00000425703 HIST1H4AP62805 103 aaKnown RBP8.61□□□□□ -1.03
MSH5-207ENST00000425703 S4R3F8 94 aa8.61□□□□□ -1.03
MSH5-207ENST00000425703 LINC00643Q86TS7 51 aa8.6□□□□□ -1.03
MSH5-207ENST00000425703 C5orf47Q569G3 176 aa8.58□□□□□ -1.04
MSH5-207ENST00000425703 UQCRQO14949 82 aa8.57□□□□□ -1.04
MSH5-207ENST00000425703 CSAG1Q6PB30 78 aa8.57□□□□□ -1.04
MSH5-207ENST00000425703 A0A1B0GV90 55 aa8.56□□□□□ -1.04
MSH5-207ENST00000425703 FCGBPQ9Y6R7 5405 aaPredicted RBP8.55□□□□□ -1.04
MSH5-207ENST00000425703 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.55□□□□□ -1.04
MSH5-207ENST00000425703 LCA10Q71F78 164 aa8.55□□□□□ -1.04
MSH5-207ENST00000425703 ATOX1O00244 68 aa8.54□□□□□ -1.04
MSH5-207ENST00000425703 KRTAP19-6Q3LI70 58 aa8.53□□□□□ -1.04
MSH5-207ENST00000425703 A0A087WVE0 104 aa8.49□□□□□ -1.05
MSH5-207ENST00000425703 H0Y9P7 68 aa8.49□□□□□ -1.05
MSH5-207ENST00000425703 FAM236AA0A1B0GUQ0 79 aa8.46□□□□□ -1.06
MSH5-207ENST00000425703 FAM236BA0A1B0GV22 79 aa8.46□□□□□ -1.06
MSH5-207ENST00000425703 J3QR89 54 aa8.44□□□□□ -1.06
MSH5-207ENST00000425703 KRTAP3-3Q9BYR6 98 aa8.44□□□□□ -1.06
MSH5-207ENST00000425703 KRTAP9-7A8MTY7 169 aa8.42□□□□□ -1.06
MSH5-207ENST00000425703 OCR1Q9BZK8 76 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms