RNA–Protein interactions for RNA: ENST00000425071.5

HDAC9-209, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-209ENST00000425071 TRACP01848 142 aa1.93□□□□□ -2.1
HDAC9-209ENST00000425071 CD164Q04900 197 aa1.93□□□□□ -2.1
HDAC9-209ENST00000425071 ATXN8Q156A1 80 aa1.93□□□□□ -2.1
HDAC9-209ENST00000425071 COL5A1-AS1Q5SY13 56 aa1.93□□□□□ -2.1
HDAC9-209ENST00000425071 DEFB105AQ8NG35 78 aa1.93□□□□□ -2.1
HDAC9-209ENST00000425071 Q9BRP9 147 aa1.93□□□□□ -2.1
HDAC9-209ENST00000425071 ORMDL1Q9P0S3 153 aa1.93□□□□□ -2.1
HDAC9-209ENST00000425071 HERC2O95714 4834 aa1.93□□□□□ -2.1
HDAC9-209ENST00000425071 PKHD1L1Q86WI1 4243 aa1.92□□□□□ -2.1
HDAC9-209ENST00000425071 A0A1B0GW54 56 aa1.92□□□□□ -2.1
HDAC9-209ENST00000425071 A8MUU9 505 aa1.92□□□□□ -2.1
HDAC9-209ENST00000425071 JMJD7-PLA2G4BH0Y9G9 81 aa1.92□□□□□ -2.1
HDAC9-209ENST00000425071 TSPAN13O95857 204 aa1.92□□□□□ -2.1
HDAC9-209ENST00000425071 FABP2P12104 132 aa1.92□□□□□ -2.1
HDAC9-209ENST00000425071 PDE6GP18545 87 aa1.92□□□□□ -2.1
HDAC9-209ENST00000425071 RPS29P62273 56 aaKnown RBP1.92□□□□□ -2.1
HDAC9-209ENST00000425071 BATFQ16520 125 aa1.92□□□□□ -2.1
HDAC9-209ENST00000425071 C9orf153Q5TBE3 101 aa1.92□□□□□ -2.1
HDAC9-209ENST00000425071 Q6ZQY7 126 aa1.92□□□□□ -2.1
HDAC9-209ENST00000425071 LINC00304Q8N9R0 145 aa1.92□□□□□ -2.1
HDAC9-209ENST00000425071 LIMD2Q9BT23 127 aa1.92□□□□□ -2.1
HDAC9-209ENST00000425071 H3BMG7 143 aa1.91□□□□□ -2.1
HDAC9-209ENST00000425071 LST1O00453 97 aa1.91□□□□□ -2.1
HDAC9-209ENST00000425071 ERC2-IT1O76042 136 aa1.91□□□□□ -2.1
HDAC9-209ENST00000425071 TCL1BO95988 128 aa1.91□□□□□ -2.1
HDAC9-209ENST00000425071 IGKV4-1P06312 121 aa1.91□□□□□ -2.1
HDAC9-209ENST00000425071 BAALC-AS2P0C853 105 aa1.91□□□□□ -2.1
HDAC9-209ENST00000425071 RBM3P98179 157 aaKnown RBP1.91□□□□□ -2.1
HDAC9-209ENST00000425071 GTF2H5Q6ZYL4 71 aa1.91□□□□□ -2.1
HDAC9-209ENST00000425071 DSCR8Q96T75 97 aa1.91□□□□□ -2.1
HDAC9-209ENST00000425071 FAT3Q8TDW7 4589 aa1.91□□□□□ -2.1
HDAC9-209ENST00000425071 A0A1W2PPM0 123 aa1.9□□□□□ -2.11
HDAC9-209ENST00000425071 H3BUT2 72 aa1.9□□□□□ -2.11
HDAC9-209ENST00000425071 K7ERJ3 54 aa1.9□□□□□ -2.11
HDAC9-209ENST00000425071 ANKRD29Q8N6D5 301 aa1.9□□□□□ -2.11
HDAC9-209ENST00000425071 ST20-AS1Q8NBB2 130 aa1.9□□□□□ -2.11
HDAC9-209ENST00000425071 SS18L2Q9UHA2 77 aa1.9□□□□□ -2.11
HDAC9-209ENST00000425071 MYCBP2O75592 4640 aa1.9□□□□□ -2.11
HDAC9-209ENST00000425071 TNXBP22105 4242 aa1.9□□□□□ -2.11
HDAC9-209ENST00000425071 C9JAW5 83 aa1.89□□□□□ -2.11
HDAC9-209ENST00000425071 H3BT86 120 aa1.89□□□□□ -2.11
HDAC9-209ENST00000425071 Q5XG85 94 aa1.89□□□□□ -2.11
HDAC9-209ENST00000425071 Q6Q795 121 aa1.89□□□□□ -2.11
HDAC9-209ENST00000425071 FP248Q71RG6 208 aaPredicted RBP1.89□□□□□ -2.11
HDAC9-209ENST00000425071 TEN1Q86WV5 123 aa1.89□□□□□ -2.11
HDAC9-209ENST00000425071 CLEC2BQ92478 149 aa1.89□□□□□ -2.11
HDAC9-209ENST00000425071 DMBT1Q9UGM3 2413 aaPredicted RBP1.89□□□□□ -2.11
HDAC9-209ENST00000425071 LRP1Q07954 4544 aaKnown RBP1.89□□□□□ -2.11
HDAC9-209ENST00000425071 FLG2Q5D862 2391 aaPredicted RBP1.88□□□□□ -2.11
HDAC9-209ENST00000425071 TRBV7-4A0A0J9YYF1 115 aa1.88□□□□□ -2.11
HDAC9-209ENST00000425071 F8W1H4 67 aa1.88□□□□□ -2.11
HDAC9-209ENST00000425071 TAX1BP3O14907 124 aa1.88□□□□□ -2.11
HDAC9-209ENST00000425071 MT1HL1P0DM35 61 aa1.88□□□□□ -2.11
HDAC9-209ENST00000425071 ASB16-AS1Q495Z4 193 aa1.88□□□□□ -2.11
HDAC9-209ENST00000425071 C3orf22Q8N5N4 141 aa1.88□□□□□ -2.11
HDAC9-209ENST00000425071 SPCS1Q9Y6A9 102 aa1.88□□□□□ -2.11
HDAC9-209ENST00000425071 LOC110117498A0A087WWA1 95 aa1.86□□□□□ -2.11
HDAC9-209ENST00000425071 TRBV7-7A0A0K0K1E9 115 aa1.86□□□□□ -2.11
HDAC9-209ENST00000425071 J3KT08 172 aa1.86□□□□□ -2.11
HDAC9-209ENST00000425071 CCKP06307 115 aa1.86□□□□□ -2.11
HDAC9-209ENST00000425071 SPANXA2-OT1Q8N9U9 137 aa1.86□□□□□ -2.11
HDAC9-209ENST00000425071 K7EP34 96 aa1.85□□□□□ -2.11
HDAC9-209ENST00000425071 NDUFB1O75438 58 aa1.85□□□□□ -2.11
HDAC9-209ENST00000425071 SPINT4Q6UDR6 99 aa1.85□□□□□ -2.11
HDAC9-209ENST00000425071 HRCT1Q6UXD1 115 aa1.85□□□□□ -2.11
HDAC9-209ENST00000425071 NAA38Q9BRA0 125 aaKnown RBP1.85□□□□□ -2.11
HDAC9-209ENST00000425071 VPS25Q9BRG1 176 aa1.85□□□□□ -2.11
HDAC9-209ENST00000425071 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
HDAC9-209ENST00000425071 J3QR89 54 aa1.84□□□□□ -2.11
HDAC9-209ENST00000425071 ACYP1P07311 99 aa1.84□□□□□ -2.11
HDAC9-209ENST00000425071 NREPQ16612 68 aa1.84□□□□□ -2.11
HDAC9-209ENST00000425071 TPRXLQ17RH7 258 aa1.84□□□□□ -2.11
HDAC9-209ENST00000425071 OBSCN-AS1Q96MR7 158 aa1.84□□□□□ -2.11
HDAC9-209ENST00000425071 C8orf17Q9NRJ1 99 aa1.84□□□□□ -2.11
HDAC9-209ENST00000425071 ABCA13Q86UQ4 5058 aa1.84□□□□□ -2.12
HDAC9-209ENST00000425071 A0A087WSZ3 146 aa1.83□□□□□ -2.12
HDAC9-209ENST00000425071 A0A1W2PNM2 257 aa1.83□□□□□ -2.12
HDAC9-209ENST00000425071 C1orf195Q5TG92 126 aa1.83□□□□□ -2.12
HDAC9-209ENST00000425071 Q6ZQT0 140 aa1.83□□□□□ -2.12
HDAC9-209ENST00000425071 UBL5Q9BZL1 73 aa1.83□□□□□ -2.12
HDAC9-209ENST00000425071 HERC1Q15751 4861 aa1.82□□□□□ -2.12
HDAC9-209ENST00000425071 C14orf132Q9NPU4 83 aa1.82□□□□□ -2.12
HDAC9-209ENST00000425071 PCLOQ9Y6V0 5065 aa1.81□□□□□ -2.12
HDAC9-209ENST00000425071 C8orf87E5RJ46 101 aa1.81□□□□□ -2.12
HDAC9-209ENST00000425071 LINC00313P59037 77 aa1.81□□□□□ -2.12
HDAC9-209ENST00000425071 ETDBQ3ZM63 59 aa1.81□□□□□ -2.12
HDAC9-209ENST00000425071 SIGMAR1Q99720 223 aa1.81□□□□□ -2.12
HDAC9-209ENST00000425071 LINC00472Q9H8W2 130 aa1.81□□□□□ -2.12
HDAC9-209ENST00000425071 A0A1B0GV72 72 aa1.8□□□□□ -2.12
HDAC9-209ENST00000425071 A8MWP4 228 aa1.8□□□□□ -2.12
HDAC9-209ENST00000425071 KRTAP5-7Q6L8G8 165 aa1.8□□□□□ -2.12
HDAC9-209ENST00000425071 ATP11AUNQ6ZP68 121 aa1.8□□□□□ -2.12
HDAC9-209ENST00000425071 RETNLBQ9BQ08 111 aa1.8□□□□□ -2.12
HDAC9-209ENST00000425071 HMCN1Q96RW7 5635 aa1.8□□□□□ -2.12
HDAC9-209ENST00000425071 A0A0G2JQZ4 141 aa1.79□□□□□ -2.12
HDAC9-209ENST00000425071 FAM240AA0A1B0GVK7 77 aa1.79□□□□□ -2.12
HDAC9-209ENST00000425071 C1orf64Q8NEQ6 169 aa1.79□□□□□ -2.12
HDAC9-209ENST00000425071 Q96NJ1 140 aa1.79□□□□□ -2.12
HDAC9-209ENST00000425071 IGHV6-1A0A0B4J1U7 121 aa1.78□□□□□ -2.12
HDAC9-209ENST00000425071 A0A1B0GV90 55 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms