RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 ALMS1Q8TCU4 4167 aa8.41□□□□□ -1.06
TPM3P9-201ENST00000424846 LIMD2Q9BT23 127 aa8.41□□□□□ -1.06
TPM3P9-201ENST00000424846 RTL8CO15255 209 aa8.4□□□□□ -1.06
TPM3P9-201ENST00000424846 SPINK6Q6UWN8 80 aa8.4□□□□□ -1.06
TPM3P9-201ENST00000424846 TP53AIP1Q9HCN2 124 aa8.4□□□□□ -1.06
TPM3P9-201ENST00000424846 SPAG11AQ6PDA7 123 aa8.4□□□□□ -1.07
TPM3P9-201ENST00000424846 LCA10Q71F78 164 aa8.4□□□□□ -1.07
TPM3P9-201ENST00000424846 MRPL34Q9BQ48 92 aaKnown RBP8.39□□□□□ -1.07
TPM3P9-201ENST00000424846 Q5W150 140 aa8.38□□□□□ -1.07
TPM3P9-201ENST00000424846 PMAIP1Q13794 54 aa8.38□□□□□ -1.07
TPM3P9-201ENST00000424846 DNAH11Q96DT5 4516 aa8.38□□□□□ -1.07
TPM3P9-201ENST00000424846 HRES1P13985 223 aa8.37□□□□□ -1.07
TPM3P9-201ENST00000424846 NUPR2A6NF83 97 aa8.37□□□□□ -1.07
TPM3P9-201ENST00000424846 ZNF861PO60384 105 aa8.37□□□□□ -1.07
TPM3P9-201ENST00000424846 CDK2AP2O75956 126 aa8.36□□□□□ -1.07
TPM3P9-201ENST00000424846 LOC101927531A0A1B0GV80 90 aa8.35□□□□□ -1.07
TPM3P9-201ENST00000424846 Q75L30 129 aa8.34□□□□□ -1.07
TPM3P9-201ENST00000424846 PLAC8Q9NZF1 115 aa8.34□□□□□ -1.07
TPM3P9-201ENST00000424846 ZNF706Q9Y5V0 76 aaPredicted RBP8.34□□□□□ -1.07
TPM3P9-201ENST00000424846 A6NED7 52 aa8.33□□□□□ -1.08
TPM3P9-201ENST00000424846 SPTSSBQ8NFR3 76 aa8.33□□□□□ -1.08
TPM3P9-201ENST00000424846 DNAH5Q8TE73 4624 aa8.33□□□□□ -1.08
TPM3P9-201ENST00000424846 CIRBP-AS1Q8TBR5 109 aa8.32□□□□□ -1.08
TPM3P9-201ENST00000424846 KRTAP13-3Q3SY46 172 aa8.3□□□□□ -1.08
TPM3P9-201ENST00000424846 PRR26Q8N8Z3 221 aa8.3□□□□□ -1.08
TPM3P9-201ENST00000424846 LINC01558Q9Y6Z2 57 aa8.29□□□□□ -1.08
TPM3P9-201ENST00000424846 SPINK7P58062 85 aa8.28□□□□□ -1.08
TPM3P9-201ENST00000424846 SEC61GP60059 68 aa8.28□□□□□ -1.08
TPM3P9-201ENST00000424846 IGLV7-43P04211 117 aa8.26□□□□□ -1.09
TPM3P9-201ENST00000424846 RETNLBQ9BQ08 111 aa8.26□□□□□ -1.09
TPM3P9-201ENST00000424846 LRP1BQ9NZR2 4599 aa8.26□□□□□ -1.09
TPM3P9-201ENST00000424846 DNHD1Q96M86 4753 aa8.23□□□□□ -1.09
TPM3P9-201ENST00000424846 CDC42SE1Q9NRR8 79 aa8.21□□□□□ -1.1
TPM3P9-201ENST00000424846 ATP11AUNQ6ZP68 121 aa8.19□□□□□ -1.1
TPM3P9-201ENST00000424846 A6NN06 94 aa8.18□□□□□ -1.1
TPM3P9-201ENST00000424846 KRTAP10-2P60368 255 aa8.18□□□□□ -1.1
TPM3P9-201ENST00000424846 C1orf134Q5TEV5 83 aa8.17□□□□□ -1.1
TPM3P9-201ENST00000424846 HYDINQ4G0P3 5121 aa8.17□□□□□ -1.1
TPM3P9-201ENST00000424846 KRTAP13-2Q52LG2 175 aa8.16□□□□□ -1.1
TPM3P9-201ENST00000424846 VPS13BQ7Z7G8 4022 aa8.15□□□□□ -1.11
TPM3P9-201ENST00000424846 PKD1P98161 4303 aa8.15□□□□□ -1.11
TPM3P9-201ENST00000424846 KTN1-AS1Q86SY8 53 aa8.14□□□□□ -1.11
TPM3P9-201ENST00000424846 LY6G6CO95867 125 aa8.13□□□□□ -1.11
TPM3P9-201ENST00000424846 LINC00313P59037 77 aa8.13□□□□□ -1.11
TPM3P9-201ENST00000424846 SSBP3-AS1Q7Z2R9 100 aa8.12□□□□□ -1.11
TPM3P9-201ENST00000424846 FAT2Q9NYQ8 4349 aa8.1□□□□□ -1.11
TPM3P9-201ENST00000424846 ACYP2P14621 99 aa8.1□□□□□ -1.11
TPM3P9-201ENST00000424846 C8orf87E5RJ46 101 aa8.1□□□□□ -1.11
TPM3P9-201ENST00000424846 DMAC1Q96GE9 116 aa8.09□□□□□ -1.11
TPM3P9-201ENST00000424846 KRTAP16-1A8MUX0 517 aa8.07□□□□□ -1.12
TPM3P9-201ENST00000424846 IGKV2-30P06310 120 aa8.06□□□□□ -1.12
TPM3P9-201ENST00000424846 FAM229AH3BQW9 127 aa8.05□□□□□ -1.12
TPM3P9-201ENST00000424846 KRTAP10-1P60331 282 aa8.05□□□□□ -1.12
TPM3P9-201ENST00000424846 RBM12B-AS1Q9P1G2 102 aa8.05□□□□□ -1.12
TPM3P9-201ENST00000424846 IGKV2D-30A0A075B6S6 120 aa8.02□□□□□ -1.13
TPM3P9-201ENST00000424846 KRTAP1-4P0C5Y4 121 aa8.02□□□□□ -1.13
TPM3P9-201ENST00000424846 PKHD1P08F94 4074 aa7.99□□□□□ -1.13
TPM3P9-201ENST00000424846 C7orf65Q6ZTY9 151 aa7.98□□□□□ -1.13
TPM3P9-201ENST00000424846 A0A1B0GU69 56 aa7.97□□□□□ -1.13
TPM3P9-201ENST00000424846 Q6ZSA8 131 aa7.97□□□□□ -1.13
TPM3P9-201ENST00000424846 ADM2Q7Z4H4 148 aa7.95□□□□□ -1.14
TPM3P9-201ENST00000424846 PRAC1Q96KF2 57 aa7.94□□□□□ -1.14
TPM3P9-201ENST00000424846 PLA2G1BP04054 148 aaKnown RBP7.9□□□□□ -1.14
TPM3P9-201ENST00000424846 Q8N1X5 172 aa7.88□□□□□ -1.15
TPM3P9-201ENST00000424846 SPINK1P00995 79 aa7.87□□□□□ -1.15
TPM3P9-201ENST00000424846 SPATA8Q6RVD6 105 aa7.87□□□□□ -1.15
TPM3P9-201ENST00000424846 TYMSOSQ8TAI1 123 aa7.87□□□□□ -1.15
TPM3P9-201ENST00000424846 MIR22HGQ0VDD5 57 aa7.84□□□□□ -1.15
TPM3P9-201ENST00000424846 C4orf48Q5BLP8 95 aa7.84□□□□□ -1.15
TPM3P9-201ENST00000424846 FAT1Q14517 4588 aa7.83□□□□□ -1.16
TPM3P9-201ENST00000424846 UQCR11O14957 56 aa7.81□□□□□ -1.16
TPM3P9-201ENST00000424846 DYNC1H1Q14204 4646 aaKnown RBP7.79□□□□□ -1.16
TPM3P9-201ENST00000424846 SACSQ9NZJ4 4579 aa7.79□□□□□ -1.16
TPM3P9-201ENST00000424846 C9orf92A6NGG3 77 aa7.75□□□□□ -1.17
TPM3P9-201ENST00000424846 SMR3BP02814 79 aaPredicted RBP7.75□□□□□ -1.17
TPM3P9-201ENST00000424846 LINC00304Q8N9R0 145 aa7.74□□□□□ -1.17
TPM3P9-201ENST00000424846 PKHD1L1Q86WI1 4243 aa7.7□□□□□ -1.18
TPM3P9-201ENST00000424846 KRTAP3-1Q9BYR8 98 aa7.69□□□□□ -1.18
TPM3P9-201ENST00000424846 APOBP04114 4563 aaKnown RBP7.67□□□□□ -1.18
TPM3P9-201ENST00000424846 H0YAA0 97 aa7.64□□□□□ -1.19
TPM3P9-201ENST00000424846 CSAG1Q6PB30 78 aa7.62□□□□□ -1.19
TPM3P9-201ENST00000424846 A8MUU9 505 aa7.61□□□□□ -1.19
TPM3P9-201ENST00000424846 C20orf166-AS1Q96NR2 134 aa7.6□□□□□ -1.19
TPM3P9-201ENST00000424846 RPS29P62273 56 aaKnown RBP7.58□□□□□ -1.2
TPM3P9-201ENST00000424846 LINC01554Q52M75 96 aa7.58□□□□□ -1.2
TPM3P9-201ENST00000424846 KRTAP10-4P60372 401 aaPredicted RBP7.57□□□□□ -1.2
TPM3P9-201ENST00000424846 LRP1Q07954 4544 aaKnown RBP7.56□□□□□ -1.2
TPM3P9-201ENST00000424846 FLG2Q5D862 2391 aaPredicted RBP7.55□□□□□ -1.2
TPM3P9-201ENST00000424846 HSPG2P98160 4391 aa7.51□□□□□ -1.21
TPM3P9-201ENST00000424846 A0A1B0GU33 70 aa7.51□□□□□ -1.21
TPM3P9-201ENST00000424846 FAT3Q8TDW7 4589 aa7.49□□□□□ -1.21
TPM3P9-201ENST00000424846 MYCBP2O75592 4640 aa7.49□□□□□ -1.21
TPM3P9-201ENST00000424846 H1FX-AS1Q4G0G2 97 aa7.48□□□□□ -1.21
TPM3P9-201ENST00000424846 KMT2CQ8NEZ4 4911 aaKnown RBP7.46□□□□□ -1.22
TPM3P9-201ENST00000424846 A0A1B0GVY2 172 aa7.45□□□□□ -1.22
TPM3P9-201ENST00000424846 RYR2Q92736 4967 aa7.44□□□□□ -1.22
TPM3P9-201ENST00000424846 TNXBP22105 4242 aa7.44□□□□□ -1.22
TPM3P9-201ENST00000424846 DMBT1Q9UGM3 2413 aaPredicted RBP7.44□□□□□ -1.22
TPM3P9-201ENST00000424846 COX6B2Q6YFQ2 88 aa7.41□□□□□ -1.22
TPM3P9-201ENST00000424846 CRIPTQ9P021 101 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms