RNA–Protein interactions for RNA: ENST00000422785.7

CDCA3-202, Transcript of cell division cycle associated 3, humanhuman

TSL 2 BASIC

Gene CDCA3, Length 2,760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-202ENST00000422785 A0A1B0GVX0 72 aa8.12□□□□□ -1.11
CDCA3-202ENST00000422785 C8orf17Q9NRJ1 99 aa8.12□□□□□ -1.11
CDCA3-202ENST00000422785 CDK2AP2O75956 126 aa8.11□□□□□ -1.11
CDCA3-202ENST00000422785 H0Y9P7 68 aa8.1□□□□□ -1.11
CDCA3-202ENST00000422785 H3BPC8 53 aa8.1□□□□□ -1.11
CDCA3-202ENST00000422785 IGHV6-1A0A0B4J1U7 121 aa8.1□□□□□ -1.11
CDCA3-202ENST00000422785 LRP1BQ9NZR2 4599 aa8.09□□□□□ -1.11
CDCA3-202ENST00000422785 PRR4Q16378 134 aa8.09□□□□□ -1.11
CDCA3-202ENST00000422785 LINC00208Q96KT6 92 aa8.09□□□□□ -1.11
CDCA3-202ENST00000422785 TRAV22A0A0B4J277 110 aa8.07□□□□□ -1.12
CDCA3-202ENST00000422785 A0A087X002 238 aa8.06□□□□□ -1.12
CDCA3-202ENST00000422785 TP53AIP1Q9HCN2 124 aa8.06□□□□□ -1.12
CDCA3-202ENST00000422785 KRTAP13-2Q52LG2 175 aa8.05□□□□□ -1.12
CDCA3-202ENST00000422785 C1orf64Q8NEQ6 169 aa8.05□□□□□ -1.12
CDCA3-202ENST00000422785 RBM12B-AS1Q9P1G2 102 aa8.04□□□□□ -1.12
CDCA3-202ENST00000422785 A8MUN3 132 aa8.04□□□□□ -1.12
CDCA3-202ENST00000422785 SPINK6Q6UWN8 80 aa8.04□□□□□ -1.12
CDCA3-202ENST00000422785 NOTCH2NLQ7Z3S9 236 aa8.03□□□□□ -1.12
CDCA3-202ENST00000422785 MRPL34Q9BQ48 92 aaKnown RBP8.03□□□□□ -1.12
CDCA3-202ENST00000422785 KRTAP1-4P0C5Y4 121 aa8.02□□□□□ -1.13
CDCA3-202ENST00000422785 CYP4F30PQ9H0H9 118 aa8.01□□□□□ -1.13
CDCA3-202ENST00000422785 Q1T7F1 81 aa8□□□□□ -1.13
CDCA3-202ENST00000422785 SACSQ9NZJ4 4579 aa8□□□□□ -1.13
CDCA3-202ENST00000422785 NDUFS5O43920 106 aa7.99□□□□□ -1.13
CDCA3-202ENST00000422785 SPTSSBQ8NFR3 76 aa7.99□□□□□ -1.13
CDCA3-202ENST00000422785 SPANXA2-OT1Q8N9U9 137 aa7.98□□□□□ -1.13
CDCA3-202ENST00000422785 VPS13BQ7Z7G8 4022 aa7.97□□□□□ -1.13
CDCA3-202ENST00000422785 C8orf87E5RJ46 101 aa7.96□□□□□ -1.14
CDCA3-202ENST00000422785 C4orf48Q5BLP8 95 aa7.95□□□□□ -1.14
CDCA3-202ENST00000422785 PLA2G1BP04054 148 aaKnown RBP7.94□□□□□ -1.14
CDCA3-202ENST00000422785 LIMD2Q9BT23 127 aa7.93□□□□□ -1.14
CDCA3-202ENST00000422785 PKHD1P08F94 4074 aa7.92□□□□□ -1.14
CDCA3-202ENST00000422785 A0A1B0GVY2 172 aa7.92□□□□□ -1.14
CDCA3-202ENST00000422785 KTN1-AS1Q86SY8 53 aa7.92□□□□□ -1.14
CDCA3-202ENST00000422785 Q5VV11 94 aa7.91□□□□□ -1.14
CDCA3-202ENST00000422785 CHKB-CPT1BH3BT56 60 aa7.9□□□□□ -1.14
CDCA3-202ENST00000422785 TYMSOSQ8TAI1 123 aa7.9□□□□□ -1.14
CDCA3-202ENST00000422785 LINC00313P59037 77 aa7.9□□□□□ -1.15
CDCA3-202ENST00000422785 IGLV7-46A0A075B6I9 117 aa7.88□□□□□ -1.15
CDCA3-202ENST00000422785 DYNC1H1Q14204 4646 aaKnown RBP7.87□□□□□ -1.15
CDCA3-202ENST00000422785 SPINK1P00995 79 aa7.87□□□□□ -1.15
CDCA3-202ENST00000422785 PCOTHQ58A44 107 aa7.87□□□□□ -1.15
CDCA3-202ENST00000422785 KRTAP13-3Q3SY46 172 aa7.87□□□□□ -1.15
CDCA3-202ENST00000422785 Q5W150 140 aa7.87□□□□□ -1.15
CDCA3-202ENST00000422785 LOC101927531A0A1B0GV80 90 aa7.85□□□□□ -1.15
CDCA3-202ENST00000422785 SMR3BP02814 79 aaPredicted RBP7.85□□□□□ -1.15
CDCA3-202ENST00000422785 LCA10Q71F78 164 aa7.84□□□□□ -1.15
CDCA3-202ENST00000422785 Q8N9P0 234 aaPredicted RBP7.84□□□□□ -1.15
CDCA3-202ENST00000422785 PRR26Q8N8Z3 221 aa7.82□□□□□ -1.16
CDCA3-202ENST00000422785 PRR15LQ9BU68 103 aa7.82□□□□□ -1.16
CDCA3-202ENST00000422785 KRTAP16-1A8MUX0 517 aa7.81□□□□□ -1.16
CDCA3-202ENST00000422785 RPS29P62273 56 aaKnown RBP7.8□□□□□ -1.16
CDCA3-202ENST00000422785 LINC00304Q8N9R0 145 aa7.8□□□□□ -1.16
CDCA3-202ENST00000422785 FAM229AH3BQW9 127 aa7.8□□□□□ -1.16
CDCA3-202ENST00000422785 KRTAP10-4P60372 401 aaPredicted RBP7.79□□□□□ -1.16
CDCA3-202ENST00000422785 SPAG11AQ6PDA7 123 aa7.79□□□□□ -1.16
CDCA3-202ENST00000422785 RYR2Q92736 4967 aa7.78□□□□□ -1.16
CDCA3-202ENST00000422785 APOBP04114 4563 aaKnown RBP7.77□□□□□ -1.16
CDCA3-202ENST00000422785 A6NED7 52 aa7.77□□□□□ -1.16
CDCA3-202ENST00000422785 A6NN06 94 aa7.76□□□□□ -1.17
CDCA3-202ENST00000422785 COA5Q86WW8 74 aa7.76□□□□□ -1.17
CDCA3-202ENST00000422785 H3BS24 57 aa7.76□□□□□ -1.17
CDCA3-202ENST00000422785 ATP11AUNQ6ZP68 121 aa7.73□□□□□ -1.17
CDCA3-202ENST00000422785 FAT1Q14517 4588 aa7.73□□□□□ -1.17
CDCA3-202ENST00000422785 RETNLBQ9BQ08 111 aa7.72□□□□□ -1.17
CDCA3-202ENST00000422785 KMT2CQ8NEZ4 4911 aaKnown RBP7.71□□□□□ -1.18
CDCA3-202ENST00000422785 IGKV2-30P06310 120 aa7.7□□□□□ -1.18
CDCA3-202ENST00000422785 HRES1P13985 223 aa7.69□□□□□ -1.18
CDCA3-202ENST00000422785 PRAC1Q96KF2 57 aa7.69□□□□□ -1.18
CDCA3-202ENST00000422785 C7orf65Q6ZTY9 151 aa7.68□□□□□ -1.18
CDCA3-202ENST00000422785 PKHD1L1Q86WI1 4243 aa7.65□□□□□ -1.19
CDCA3-202ENST00000422785 ADM2Q7Z4H4 148 aa7.63□□□□□ -1.19
CDCA3-202ENST00000422785 Q75L30 129 aa7.63□□□□□ -1.19
CDCA3-202ENST00000422785 ACYP2P14621 99 aa7.62□□□□□ -1.19
CDCA3-202ENST00000422785 DMAC1Q96GE9 116 aa7.62□□□□□ -1.19
CDCA3-202ENST00000422785 CDC42SE1Q9NRR8 79 aa7.61□□□□□ -1.19
CDCA3-202ENST00000422785 IGKV2D-30A0A075B6S6 120 aa7.6□□□□□ -1.19
CDCA3-202ENST00000422785 SPINK7P58062 85 aa7.6□□□□□ -1.19
CDCA3-202ENST00000422785 LINC01558Q9Y6Z2 57 aa7.56□□□□□ -1.2
CDCA3-202ENST00000422785 C9orf92A6NGG3 77 aa7.55□□□□□ -1.2
CDCA3-202ENST00000422785 C20orf166-AS1Q96NR2 134 aa7.55□□□□□ -1.2
CDCA3-202ENST00000422785 A8MUU9 505 aa7.54□□□□□ -1.2
CDCA3-202ENST00000422785 Q5VSD8 79 aa7.53□□□□□ -1.2
CDCA3-202ENST00000422785 FLG2Q5D862 2391 aaPredicted RBP7.5□□□□□ -1.21
CDCA3-202ENST00000422785 KRTAP10-8P60410 259 aa7.5□□□□□ -1.21
CDCA3-202ENST00000422785 Q8N1X5 172 aa7.5□□□□□ -1.21
CDCA3-202ENST00000422785 RYR3Q15413 4870 aa7.49□□□□□ -1.21
CDCA3-202ENST00000422785 HSPG2P98160 4391 aa7.48□□□□□ -1.21
CDCA3-202ENST00000422785 LINC01554Q52M75 96 aa7.48□□□□□ -1.21
CDCA3-202ENST00000422785 LRP1Q07954 4544 aaKnown RBP7.43□□□□□ -1.22
CDCA3-202ENST00000422785 TNXBP22105 4242 aa7.43□□□□□ -1.22
CDCA3-202ENST00000422785 RYR1P21817 5038 aa7.42□□□□□ -1.22
CDCA3-202ENST00000422785 FAT3Q8TDW7 4589 aa7.41□□□□□ -1.22
CDCA3-202ENST00000422785 KRTAP17-1Q9BYP8 105 aa7.4□□□□□ -1.23
CDCA3-202ENST00000422785 A0A1B0GU69 56 aa7.33□□□□□ -1.24
CDCA3-202ENST00000422785 KIAA1109Q2LD37 5005 aa7.31□□□□□ -1.24
CDCA3-202ENST00000422785 DMBT1Q9UGM3 2413 aaPredicted RBP7.31□□□□□ -1.24
CDCA3-202ENST00000422785 MT1HL1P0DM35 61 aa7.3□□□□□ -1.24
CDCA3-202ENST00000422785 CSAG1Q6PB30 78 aa7.3□□□□□ -1.24
CDCA3-202ENST00000422785 KRTAP3-1Q9BYR8 98 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms