RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 VCANP13611 3396 aa7.59□□□□□ -1.19
COL20A1-203ENST00000422202 KRTAP29-1A8MX34 341 aaPredicted RBP7.59□□□□□ -1.19
COL20A1-203ENST00000422202 LAMA1P25391 3075 aa7.58□□□□□ -1.2
COL20A1-203ENST00000422202 LRBAP50851 2863 aa7.56□□□□□ -1.2
COL20A1-203ENST00000422202 KRTAP11-1Q8IUC1 163 aa7.55□□□□□ -1.2
COL20A1-203ENST00000422202 ITPR1Q14643 2758 aa7.53□□□□□ -1.2
COL20A1-203ENST00000422202 WDFY3Q8IZQ1 3526 aa7.52□□□□□ -1.21
COL20A1-203ENST00000422202 IGSF10Q6WRI0 2623 aa7.51□□□□□ -1.21
COL20A1-203ENST00000422202 MYO15AQ9UKN7 3530 aa7.48□□□□□ -1.21
COL20A1-203ENST00000422202 KRTAP13-2Q52LG2 175 aa7.46□□□□□ -1.21
COL20A1-203ENST00000422202 COL12A1Q99715 3063 aa7.46□□□□□ -1.22
COL20A1-203ENST00000422202 BOD1L1Q8NFC6 3051 aa7.46□□□□□ -1.22
COL20A1-203ENST00000422202 DMXL2Q8TDJ6 3036 aa7.46□□□□□ -1.22
COL20A1-203ENST00000422202 Q6ZRN7 208 aaPredicted RBP7.44□□□□□ -1.22
COL20A1-203ENST00000422202 A6NN06 94 aa7.44□□□□□ -1.22
COL20A1-203ENST00000422202 KRTAP10-10P60014 251 aa7.4□□□□□ -1.22
COL20A1-203ENST00000422202 PRO2289Q9P1D8 64 aa7.4□□□□□ -1.22
COL20A1-203ENST00000422202 UBR5O95071 2799 aaPredicted RBP7.4□□□□□ -1.23
COL20A1-203ENST00000422202 TACC2O95359 2948 aa7.4□□□□□ -1.23
COL20A1-203ENST00000422202 ATMQ13315 3056 aa7.39□□□□□ -1.23
COL20A1-203ENST00000422202 KRTAP21-3Q3LHN1 58 aa7.38□□□□□ -1.23
COL20A1-203ENST00000422202 PP632Q6XCG6 107 aa7.38□□□□□ -1.23
COL20A1-203ENST00000422202 SPTBN5Q9NRC6 3674 aaKnown RBP7.36□□□□□ -1.23
COL20A1-203ENST00000422202 ASPMQ8IZT6 3477 aa7.35□□□□□ -1.23
COL20A1-203ENST00000422202 DMXL1Q9Y485 3027 aa7.33□□□□□ -1.24
COL20A1-203ENST00000422202 ZZEF1O43149 2961 aa7.32□□□□□ -1.24
COL20A1-203ENST00000422202 NBPF19A0A087WUL8 3843 aa7.3□□□□□ -1.24
COL20A1-203ENST00000422202 NBEAQ8NFP9 2946 aa7.29□□□□□ -1.24
COL20A1-203ENST00000422202 ADGRG4Q8IZF6 3080 aa7.29□□□□□ -1.24
COL20A1-203ENST00000422202 DCHS1Q96JQ0 3298 aa7.28□□□□□ -1.24
COL20A1-203ENST00000422202 KRTAP7-1Q8IUC3 87 aa7.27□□□□□ -1.25
COL20A1-203ENST00000422202 FLNCQ14315 2725 aa7.25□□□□□ -1.25
COL20A1-203ENST00000422202 XP32Q5T750 250 aa7.23□□□□□ -1.25
COL20A1-203ENST00000422202 KRTAP13-1Q8IUC0 172 aa7.23□□□□□ -1.25
COL20A1-203ENST00000422202 LAMA5O15230 3695 aa7.23□□□□□ -1.25
COL20A1-203ENST00000422202 LOC400499M0QZD8 3231 aa7.22□□□□□ -1.25
COL20A1-203ENST00000422202 HIVEP1P15822 2718 aa7.22□□□□□ -1.25
COL20A1-203ENST00000422202 ZFHX4Q86UP3 3567 aa7.17□□□□□ -1.26
COL20A1-203ENST00000422202 TNRC18O15417 2968 aaPredicted RBP7.14□□□□□ -1.27
COL20A1-203ENST00000422202 TENM1Q9UKZ4 2725 aa7.12□□□□□ -1.27
COL20A1-203ENST00000422202 CELSR2Q9HCU4 2923 aa7.1□□□□□ -1.27
COL20A1-203ENST00000422202 EYSQ5T1H1 3165 aa7.09□□□□□ -1.27
COL20A1-203ENST00000422202 H0YAA0 97 aa7.09□□□□□ -1.27
COL20A1-203ENST00000422202 TPRXLQ17RH7 258 aa7.09□□□□□ -1.27
COL20A1-203ENST00000422202 CELSR1Q9NYQ6 3014 aa7.06□□□□□ -1.28
COL20A1-203ENST00000422202 CSMD1Q96PZ7 3565 aa7.05□□□□□ -1.28
COL20A1-203ENST00000422202 RELNP78509 3460 aa7.05□□□□□ -1.28
COL20A1-203ENST00000422202 NF1P21359 2839 aa7.04□□□□□ -1.28
COL20A1-203ENST00000422202 NIPBLQ6KC79 2804 aaeCLIP7.01□□□□□ -1.29
COL20A1-203ENST00000422202 TENM4Q6N022 2769 aa7□□□□□ -1.29
COL20A1-203ENST00000422202 DCHS2Q6V1P9 2916 aa6.99□□□□□ -1.29
COL20A1-203ENST00000422202 KRTAP1-4P0C5Y4 121 aa6.94□□□□□ -1.3
COL20A1-203ENST00000422202 SPENQ96T58 3664 aaKnown RBP6.93□□□□□ -1.3
COL20A1-203ENST00000422202 PDZD2O15018 2839 aa6.92□□□□□ -1.3
COL20A1-203ENST00000422202 DMDP11532 3685 aa6.92□□□□□ -1.3
COL20A1-203ENST00000422202 SMG1Q96Q15 3661 aaKnown RBP6.89□□□□□ -1.31
COL20A1-203ENST00000422202 TENM3Q9P273 2699 aa6.89□□□□□ -1.31
COL20A1-203ENST00000422202 ZANQ9Y493 2812 aa6.88□□□□□ -1.31
COL20A1-203ENST00000422202 KRTAP13-3Q3SY46 172 aa6.87□□□□□ -1.31
COL20A1-203ENST00000422202 HRNRQ86YZ3 2850 aaPredicted RBP6.85□□□□□ -1.31
COL20A1-203ENST00000422202 FBN2P35556 2912 aa6.84□□□□□ -1.31
COL20A1-203ENST00000422202 KRTAP12-2P59991 146 aa6.84□□□□□ -1.31
COL20A1-203ENST00000422202 TGP01266 2768 aa6.84□□□□□ -1.31
COL20A1-203ENST00000422202 CUBNO60494 3623 aa6.73□□□□□ -1.33
COL20A1-203ENST00000422202 KRTAP15-1Q3LI76 137 aa6.73□□□□□ -1.33
COL20A1-203ENST00000422202 PKD1L1Q8TDX9 2849 aa6.72□□□□□ -1.33
COL20A1-203ENST00000422202 SRRM2Q9UQ35 2752 aaKnown RBP6.7□□□□□ -1.34
COL20A1-203ENST00000422202 TENM2Q9NT68 2774 aa6.68□□□□□ -1.34
COL20A1-203ENST00000422202 VWFP04275 2813 aa6.67□□□□□ -1.34
COL20A1-203ENST00000422202 ZFHX3Q15911 3703 aa6.67□□□□□ -1.34
COL20A1-203ENST00000422202 KRTAP13-4Q3LI77 160 aa6.67□□□□□ -1.34
COL20A1-203ENST00000422202 SVEP1Q4LDE5 3571 aa6.64□□□□□ -1.35
COL20A1-203ENST00000422202 CRCT1Q9UGL9 99 aa6.64□□□□□ -1.35
COL20A1-203ENST00000422202 MXRA5Q9NR99 2828 aa6.61□□□□□ -1.35
COL20A1-203ENST00000422202 KRTAP12-1P59990 96 aa6.51□□□□□ -1.37
COL20A1-203ENST00000422202 COL7A1Q02388 2944 aa6.46□□□□□ -1.38
COL20A1-203ENST00000422202 VPS13CQ709C8 3753 aa6.41□□□□□ -1.38
COL20A1-203ENST00000422202 MUC3AQ02505 3323 aa6.39□□□□□ -1.39
COL20A1-203ENST00000422202 INE1O15225 51 aa6.38□□□□□ -1.39
COL20A1-203ENST00000422202 MEGF8Q7Z7M0 2845 aa6.34□□□□□ -1.39
COL20A1-203ENST00000422202 CSMD2Q7Z408 3487 aa6.34□□□□□ -1.4
COL20A1-203ENST00000422202 CSMD3Q7Z407 3707 aa6.29□□□□□ -1.4
COL20A1-203ENST00000422202 KRTAP10-12P60413 245 aa6.26□□□□□ -1.41
COL20A1-203ENST00000422202 BSNQ9UPA5 3926 aa6.25□□□□□ -1.41
COL20A1-203ENST00000422202 TRRAPQ9Y4A5 3859 aa6.24□□□□□ -1.41
COL20A1-203ENST00000422202 KRTAP3-1Q9BYR8 98 aa6.16□□□□□ -1.42
COL20A1-203ENST00000422202 FBN1P35555 2871 aaKnown RBP6.13□□□□□ -1.43
COL20A1-203ENST00000422202 LORP23490 312 aaPredicted RBP6.11□□□□□ -1.43
COL20A1-203ENST00000422202 AKAP9Q99996 3911 aa6.1□□□□□ -1.43
COL20A1-203ENST00000422202 KRTAP10-6P60371 365 aaPredicted RBP6.09□□□□□ -1.44
COL20A1-203ENST00000422202 FBN3Q75N90 2809 aa6.08□□□□□ -1.44
COL20A1-203ENST00000422202 OTOGQ6ZRI0 2925 aa6.03□□□□□ -1.44
COL20A1-203ENST00000422202 KRTAP10-5P60370 271 aa6□□□□□ -1.45
COL20A1-203ENST00000422202 KRTAP12-3P60328 96 aa5.99□□□□□ -1.45
COL20A1-203ENST00000422202 KRTAP8-1Q8IUC2 63 aa5.92□□□□□ -1.46
COL20A1-203ENST00000422202 KRTAP4-5Q9BYR2 181 aa5.92□□□□□ -1.46
COL20A1-203ENST00000422202 LCE3AQ5TA76 89 aa5.91□□□□□ -1.46
COL20A1-203ENST00000422202 ANK3Q12955 4377 aaKnown RBP5.86□□□□□ -1.47
COL20A1-203ENST00000422202 MT1HL1P0DM35 61 aa5.8□□□□□ -1.48
COL20A1-203ENST00000422202 HUWE1Q7Z6Z7 4374 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms