RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 KRTAP9-2Q9BYQ4 174 aa8.46□□□□□ -1.06
BRAT1-202ENST00000421712 NREPQ16612 68 aa8.45□□□□□ -1.06
BRAT1-202ENST00000421712 ATP11AUNQ6ZP68 121 aa8.43□□□□□ -1.06
BRAT1-202ENST00000421712 Q75L30 129 aa8.43□□□□□ -1.06
BRAT1-202ENST00000421712 KRTAP4-1Q9BYQ7 146 aa8.43□□□□□ -1.06
BRAT1-202ENST00000421712 PRO0461Q9UI25 63 aa8.43□□□□□ -1.06
BRAT1-202ENST00000421712 NDUFB1O75438 58 aa8.42□□□□□ -1.06
BRAT1-202ENST00000421712 KRTAP9-6A0A140TA67 174 aa8.41□□□□□ -1.06
BRAT1-202ENST00000421712 A0A1B0GVX0 72 aa8.41□□□□□ -1.06
BRAT1-202ENST00000421712 F8W1H4 67 aa8.39□□□□□ -1.07
BRAT1-202ENST00000421712 NOTCH2NLQ7Z3S9 236 aa8.39□□□□□ -1.07
BRAT1-202ENST00000421712 C8orf87E5RJ46 101 aa8.38□□□□□ -1.07
BRAT1-202ENST00000421712 C20orf166-AS1Q96NR2 134 aa8.38□□□□□ -1.07
BRAT1-202ENST00000421712 A8MUU9 505 aa8.36□□□□□ -1.07
BRAT1-202ENST00000421712 A8MWP4 228 aa8.35□□□□□ -1.07
BRAT1-202ENST00000421712 KRTAP16-1A8MUX0 517 aa8.33□□□□□ -1.08
BRAT1-202ENST00000421712 ETDBQ3ZM63 59 aa8.32□□□□□ -1.08
BRAT1-202ENST00000421712 IGKV3D-7A0A0C4DH55 119 aa8.31□□□□□ -1.08
BRAT1-202ENST00000421712 BPY2O14599 106 aa8.31□□□□□ -1.08
BRAT1-202ENST00000421712 Q6ZVQ6 151 aa8.3□□□□□ -1.08
BRAT1-202ENST00000421712 PRR15Q8IV56 129 aa8.29□□□□□ -1.08
BRAT1-202ENST00000421712 C8orf17Q9NRJ1 99 aa8.29□□□□□ -1.08
BRAT1-202ENST00000421712 UBL5Q9BZL1 73 aa8.28□□□□□ -1.08
BRAT1-202ENST00000421712 FAT4Q6V0I7 4981 aa8.27□□□□□ -1.09
BRAT1-202ENST00000421712 LINC00846Q9NV44 126 aa8.26□□□□□ -1.09
BRAT1-202ENST00000421712 K7EQZ3 153 aa8.24□□□□□ -1.09
BRAT1-202ENST00000421712 A0A1B0GV90 55 aa8.22□□□□□ -1.09
BRAT1-202ENST00000421712 MMP24-AS1A0A0U1RRL7 71 aa8.19□□□□□ -1.1
BRAT1-202ENST00000421712 COX6B2Q6YFQ2 88 aa8.19□□□□□ -1.1
BRAT1-202ENST00000421712 Q8N9L7 120 aa8.19□□□□□ -1.1
BRAT1-202ENST00000421712 Q8N9P0 234 aaPredicted RBP8.19□□□□□ -1.1
BRAT1-202ENST00000421712 hDV103S1A0JD37 113 aa8.18□□□□□ -1.1
BRAT1-202ENST00000421712 MRPL34Q9BQ48 92 aaKnown RBP8.18□□□□□ -1.1
BRAT1-202ENST00000421712 TMEM254Q8TBM7 123 aa8.17□□□□□ -1.1
BRAT1-202ENST00000421712 ZCCHC13Q8WW36 166 aaKnown RBP8.17□□□□□ -1.1
BRAT1-202ENST00000421712 NDUFS5O43920 106 aa8.16□□□□□ -1.1
BRAT1-202ENST00000421712 LCE2AQ5TA79 106 aaPredicted RBP8.16□□□□□ -1.1
BRAT1-202ENST00000421712 KRTAP19-2Q3LHN2 52 aa8.14□□□□□ -1.11
BRAT1-202ENST00000421712 WFDC13Q8IUB5 93 aa8.14□□□□□ -1.11
BRAT1-202ENST00000421712 LCE2CQ5TA81 110 aa8.13□□□□□ -1.11
BRAT1-202ENST00000421712 CASC2Q6XLA1 102 aa8.12□□□□□ -1.11
BRAT1-202ENST00000421712 ACYP1P07311 99 aa8.11□□□□□ -1.11
BRAT1-202ENST00000421712 CXCL6P80162 114 aa8.08□□□□□ -1.12
BRAT1-202ENST00000421712 FAM240AA0A1B0GVK7 77 aa8.06□□□□□ -1.12
BRAT1-202ENST00000421712 HCG22E2RYF7 251 aa8.06□□□□□ -1.12
BRAT1-202ENST00000421712 SPINK7P58062 85 aa8.06□□□□□ -1.12
BRAT1-202ENST00000421712 FAM236DA0A1B0GTK5 79 aa8.05□□□□□ -1.12
BRAT1-202ENST00000421712 FAM236CP0DP71 79 aa8.05□□□□□ -1.12
BRAT1-202ENST00000421712 MT1HP80294 61 aa8.05□□□□□ -1.12
BRAT1-202ENST00000421712 RBM12B-AS1Q9P1G2 102 aa8.05□□□□□ -1.12
BRAT1-202ENST00000421712 M0R2T5 61 aa8.03□□□□□ -1.12
BRAT1-202ENST00000421712 HRES1P13985 223 aa8.01□□□□□ -1.13
BRAT1-202ENST00000421712 ATP5EP2Q5VTU8 51 aa7.97□□□□□ -1.13
BRAT1-202ENST00000421712 Q5W150 140 aa7.96□□□□□ -1.14
BRAT1-202ENST00000421712 FSIP2Q5CZC0 6907 aa7.96□□□□□ -1.14
BRAT1-202ENST00000421712 J3QR89 54 aa7.95□□□□□ -1.14
BRAT1-202ENST00000421712 HIST1H4AP62805 103 aaKnown RBP7.95□□□□□ -1.14
BRAT1-202ENST00000421712 IGKV2D-30A0A075B6S6 120 aa7.94□□□□□ -1.14
BRAT1-202ENST00000421712 IGKV2-30P06310 120 aa7.94□□□□□ -1.14
BRAT1-202ENST00000421712 MPLKIPQ8TAP9 179 aa7.94□□□□□ -1.14
BRAT1-202ENST00000421712 LINC00643Q86TS7 51 aa7.93□□□□□ -1.14
BRAT1-202ENST00000421712 TP53AIP1Q9HCN2 124 aa7.91□□□□□ -1.14
BRAT1-202ENST00000421712 C7orf65Q6ZTY9 151 aa7.9□□□□□ -1.14
BRAT1-202ENST00000421712 FLGP20930 4061 aaPredicted RBP7.88□□□□□ -1.15
BRAT1-202ENST00000421712 CRCT1Q9UGL9 99 aa7.88□□□□□ -1.15
BRAT1-202ENST00000421712 KRTAP10-6P60371 365 aaPredicted RBP7.86□□□□□ -1.15
BRAT1-202ENST00000421712 A0A087WVE0 104 aa7.82□□□□□ -1.16
BRAT1-202ENST00000421712 LORP23490 312 aaPredicted RBP7.81□□□□□ -1.16
BRAT1-202ENST00000421712 LCE2DQ5TA82 110 aaPredicted RBP7.77□□□□□ -1.17
BRAT1-202ENST00000421712 TRAV22A0A0B4J277 110 aa7.76□□□□□ -1.17
BRAT1-202ENST00000421712 C4orf26Q17RF5 130 aa7.76□□□□□ -1.17
BRAT1-202ENST00000421712 K7ERU9 68 aa7.75□□□□□ -1.17
BRAT1-202ENST00000421712 UQCRQO14949 82 aa7.75□□□□□ -1.17
BRAT1-202ENST00000421712 H1FX-AS1Q4G0G2 97 aa7.74□□□□□ -1.17
BRAT1-202ENST00000421712 H0Y9P7 68 aa7.7□□□□□ -1.18
BRAT1-202ENST00000421712 CYP4F30PQ9H0H9 118 aa7.69□□□□□ -1.18
BRAT1-202ENST00000421712 LOC101927531A0A1B0GV80 90 aa7.68□□□□□ -1.18
BRAT1-202ENST00000421712 ATOX1O00244 68 aa7.67□□□□□ -1.18
BRAT1-202ENST00000421712 SCGB1A1P11684 91 aa7.67□□□□□ -1.18
BRAT1-202ENST00000421712 C1orf64Q8NEQ6 169 aa7.66□□□□□ -1.18
BRAT1-202ENST00000421712 KRTAP9-8Q9BYQ0 159 aa7.64□□□□□ -1.19
BRAT1-202ENST00000421712 MT-ATP8P03928 68 aa7.62□□□□□ -1.19
BRAT1-202ENST00000421712 OCR1Q9BZK8 76 aa7.62□□□□□ -1.19
BRAT1-202ENST00000421712 MP68P56378 58 aa7.61□□□□□ -1.19
BRAT1-202ENST00000421712 IMUPQ9GZP8 106 aa7.61□□□□□ -1.19
BRAT1-202ENST00000421712 LINC00208Q96KT6 92 aa7.6□□□□□ -1.19
BRAT1-202ENST00000421712 KRTAP3-1Q9BYR8 98 aa7.59□□□□□ -1.19
BRAT1-202ENST00000421712 C5orf47Q569G3 176 aa7.58□□□□□ -1.2
BRAT1-202ENST00000421712 MT2AP02795 61 aa7.57□□□□□ -1.2
BRAT1-202ENST00000421712 KRTAP10-10P60014 251 aa7.56□□□□□ -1.2
BRAT1-202ENST00000421712 S4R3F8 94 aa7.56□□□□□ -1.2
BRAT1-202ENST00000421712 MT1FP04733 61 aa7.51□□□□□ -1.21
BRAT1-202ENST00000421712 FAM236AA0A1B0GUQ0 79 aa7.5□□□□□ -1.21
BRAT1-202ENST00000421712 FAM236BA0A1B0GV22 79 aa7.5□□□□□ -1.21
BRAT1-202ENST00000421712 KRTAP9-7A8MTY7 169 aa7.5□□□□□ -1.21
BRAT1-202ENST00000421712 H3BPC8 53 aa7.5□□□□□ -1.21
BRAT1-202ENST00000421712 KLKP1Q107X0 134 aa7.5□□□□□ -1.21
BRAT1-202ENST00000421712 LCA10Q71F78 164 aa7.48□□□□□ -1.21
BRAT1-202ENST00000421712 CSAG1Q6PB30 78 aa7.46□□□□□ -1.22
BRAT1-202ENST00000421712 SMIM20Q8N5G0 67 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms