RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 FAM240AA0A1B0GVK7 77 aa8.63□□□□□ -1.03
DDX55-203ENST00000421670 ACYP1P07311 99 aa8.61□□□□□ -1.03
DDX55-203ENST00000421670 IGHV6-1A0A0B4J1U7 121 aa8.61□□□□□ -1.03
DDX55-203ENST00000421670 BPY2O14599 106 aa8.61□□□□□ -1.03
DDX55-203ENST00000421670 A0A1B0GVX0 72 aa8.6□□□□□ -1.03
DDX55-203ENST00000421670 DSCR10P59022 87 aa8.6□□□□□ -1.03
DDX55-203ENST00000421670 UBR4Q5T4S7 5183 aa8.59□□□□□ -1.03
DDX55-203ENST00000421670 A8MWP4 228 aa8.59□□□□□ -1.03
DDX55-203ENST00000421670 IGKV3D-7A0A0C4DH55 119 aa8.58□□□□□ -1.04
DDX55-203ENST00000421670 XP32Q5T750 250 aa8.58□□□□□ -1.04
DDX55-203ENST00000421670 NDUFB1O75438 58 aa8.57□□□□□ -1.04
DDX55-203ENST00000421670 NOTCH2NLQ7Z3S9 236 aa8.57□□□□□ -1.04
DDX55-203ENST00000421670 J3QR89 54 aa8.56□□□□□ -1.04
DDX55-203ENST00000421670 K7EQZ3 153 aa8.56□□□□□ -1.04
DDX55-203ENST00000421670 Q8N9L7 120 aa8.56□□□□□ -1.04
DDX55-203ENST00000421670 LINC00313P59037 77 aa8.54□□□□□ -1.04
DDX55-203ENST00000421670 PRR15Q8IV56 129 aa8.54□□□□□ -1.04
DDX55-203ENST00000421670 C8orf87E5RJ46 101 aa8.51□□□□□ -1.05
DDX55-203ENST00000421670 KRTAP16-1A8MUX0 517 aa8.5□□□□□ -1.05
DDX55-203ENST00000421670 C8orf17Q9NRJ1 99 aa8.5□□□□□ -1.05
DDX55-203ENST00000421670 CXCL6P80162 114 aa8.49□□□□□ -1.05
DDX55-203ENST00000421670 MUC17Q685J3 4493 aa8.49□□□□□ -1.05
DDX55-203ENST00000421670 K7ERU9 68 aa8.48□□□□□ -1.05
DDX55-203ENST00000421670 MMP24-AS1A0A0U1RRL7 71 aa8.47□□□□□ -1.05
DDX55-203ENST00000421670 LCE2CQ5TA81 110 aa8.46□□□□□ -1.06
DDX55-203ENST00000421670 RPL37P61927 97 aaKnown RBP8.45□□□□□ -1.06
DDX55-203ENST00000421670 ATP5EP2Q5VTU8 51 aa8.45□□□□□ -1.06
DDX55-203ENST00000421670 LINC00643Q86TS7 51 aa8.45□□□□□ -1.06
DDX55-203ENST00000421670 C20orf166-AS1Q96NR2 134 aa8.44□□□□□ -1.06
DDX55-203ENST00000421670 A8MUU9 505 aa8.43□□□□□ -1.06
DDX55-203ENST00000421670 Q75L30 129 aa8.43□□□□□ -1.06
DDX55-203ENST00000421670 MUC2Q02817 5179 aa8.42□□□□□ -1.06
DDX55-203ENST00000421670 hDV103S1A0JD37 113 aa8.41□□□□□ -1.06
DDX55-203ENST00000421670 WFDC13Q8IUB5 93 aa8.41□□□□□ -1.06
DDX55-203ENST00000421670 RNF213Q63HN8 5207 aa8.41□□□□□ -1.06
DDX55-203ENST00000421670 SEC61BP60468 96 aaKnown RBP8.39□□□□□ -1.07
DDX55-203ENST00000421670 PCOTHQ58A44 107 aa8.39□□□□□ -1.07
DDX55-203ENST00000421670 CASC2Q6XLA1 102 aa8.39□□□□□ -1.07
DDX55-203ENST00000421670 TMEM254Q8TBM7 123 aa8.39□□□□□ -1.07
DDX55-203ENST00000421670 HCG22E2RYF7 251 aa8.38□□□□□ -1.07
DDX55-203ENST00000421670 HIST1H4AP62805 103 aaKnown RBP8.38□□□□□ -1.07
DDX55-203ENST00000421670 LCE2AQ5TA79 106 aaPredicted RBP8.38□□□□□ -1.07
DDX55-203ENST00000421670 MRPL34Q9BQ48 92 aaKnown RBP8.38□□□□□ -1.07
DDX55-203ENST00000421670 Q8N9P0 234 aaPredicted RBP8.36□□□□□ -1.07
DDX55-203ENST00000421670 ATP11AUNQ6ZP68 121 aa8.35□□□□□ -1.07
DDX55-203ENST00000421670 A0A087WVE0 104 aa8.34□□□□□ -1.07
DDX55-203ENST00000421670 NDUFS5O43920 106 aa8.32□□□□□ -1.08
DDX55-203ENST00000421670 KRTAP4-1Q9BYQ7 146 aa8.3□□□□□ -1.08
DDX55-203ENST00000421670 MT-ATP8P03928 68 aa8.29□□□□□ -1.08
DDX55-203ENST00000421670 ZCCHC13Q8WW36 166 aaKnown RBP8.27□□□□□ -1.09
DDX55-203ENST00000421670 LORP23490 312 aaPredicted RBP8.22□□□□□ -1.09
DDX55-203ENST00000421670 Q5W150 140 aa8.19□□□□□ -1.1
DDX55-203ENST00000421670 IMUPQ9GZP8 106 aa8.19□□□□□ -1.1
DDX55-203ENST00000421670 TP53AIP1Q9HCN2 124 aa8.15□□□□□ -1.1
DDX55-203ENST00000421670 FAM236AA0A1B0GUQ0 79 aa8.1□□□□□ -1.11
DDX55-203ENST00000421670 FAM236BA0A1B0GV22 79 aa8.1□□□□□ -1.11
DDX55-203ENST00000421670 SPINK7P58062 85 aa8.1□□□□□ -1.11
DDX55-203ENST00000421670 IGKV2D-30A0A075B6S6 120 aa8.09□□□□□ -1.11
DDX55-203ENST00000421670 IGKV2-30P06310 120 aa8.09□□□□□ -1.11
DDX55-203ENST00000421670 SCGB1A1P11684 91 aa8.09□□□□□ -1.11
DDX55-203ENST00000421670 OCR1Q9BZK8 76 aa8.09□□□□□ -1.11
DDX55-203ENST00000421670 TRAV22A0A0B4J277 110 aa8.07□□□□□ -1.12
DDX55-203ENST00000421670 FAT4Q6V0I7 4981 aa8.06□□□□□ -1.12
DDX55-203ENST00000421670 UQCRQO14949 82 aa8.06□□□□□ -1.12
DDX55-203ENST00000421670 HRES1P13985 223 aa8.05□□□□□ -1.12
DDX55-203ENST00000421670 C7orf65Q6ZTY9 151 aa8.04□□□□□ -1.12
DDX55-203ENST00000421670 H0Y9P7 68 aa8.02□□□□□ -1.13
DDX55-203ENST00000421670 KRTAP19-2Q3LHN2 52 aa8.02□□□□□ -1.13
DDX55-203ENST00000421670 A0A0U1RQV1 116 aa8□□□□□ -1.13
DDX55-203ENST00000421670 MPLKIPQ8TAP9 179 aa7.98□□□□□ -1.13
DDX55-203ENST00000421670 ATOX1O00244 68 aa7.97□□□□□ -1.13
DDX55-203ENST00000421670 COX6B2Q6YFQ2 88 aa7.97□□□□□ -1.13
DDX55-203ENST00000421670 LOC101927531A0A1B0GV80 90 aa7.95□□□□□ -1.14
DDX55-203ENST00000421670 RBM12B-AS1Q9P1G2 102 aa7.95□□□□□ -1.14
DDX55-203ENST00000421670 MP68P56378 58 aa7.94□□□□□ -1.14
DDX55-203ENST00000421670 SMIM20Q8N5G0 67 aa7.94□□□□□ -1.14
DDX55-203ENST00000421670 LINC00208Q96KT6 92 aa7.94□□□□□ -1.14
DDX55-203ENST00000421670 CYP4F30PQ9H0H9 118 aa7.94□□□□□ -1.14
DDX55-203ENST00000421670 TRAV7A0A075B6U4 112 aa7.93□□□□□ -1.14
DDX55-203ENST00000421670 C5orf47Q569G3 176 aa7.93□□□□□ -1.14
DDX55-203ENST00000421670 C1orf64Q8NEQ6 169 aa7.93□□□□□ -1.14
DDX55-203ENST00000421670 FAM236DA0A1B0GTK5 79 aa7.93□□□□□ -1.14
DDX55-203ENST00000421670 FAM236CP0DP71 79 aa7.93□□□□□ -1.14
DDX55-203ENST00000421670 FLGP20930 4061 aaPredicted RBP7.91□□□□□ -1.14
DDX55-203ENST00000421670 C4orf26Q17RF5 130 aa7.89□□□□□ -1.15
DDX55-203ENST00000421670 H3BPC8 53 aa7.85□□□□□ -1.15
DDX55-203ENST00000421670 SERP2Q8N6R1 65 aa7.85□□□□□ -1.15
DDX55-203ENST00000421670 MT1HP80294 61 aa7.84□□□□□ -1.15
DDX55-203ENST00000421670 KLKP1Q107X0 134 aa7.84□□□□□ -1.15
DDX55-203ENST00000421670 SNURFQ9Y675 71 aa7.78□□□□□ -1.16
DDX55-203ENST00000421670 C20orf197Q8N268 126 aa7.77□□□□□ -1.17
DDX55-203ENST00000421670 KRTAP3-1Q9BYR8 98 aa7.77□□□□□ -1.17
DDX55-203ENST00000421670 H1FX-AS1Q4G0G2 97 aa7.76□□□□□ -1.17
DDX55-203ENST00000421670 ANAPC13Q9BS18 74 aa7.75□□□□□ -1.17
DDX55-203ENST00000421670 COX7CP15954 63 aa7.74□□□□□ -1.17
DDX55-203ENST00000421670 M0R2T5 61 aa7.73□□□□□ -1.17
DDX55-203ENST00000421670 S4R3F8 94 aa7.63□□□□□ -1.19
DDX55-203ENST00000421670 A8MUN3 132 aa7.62□□□□□ -1.19
DDX55-203ENST00000421670 CYSTM1Q9H1C7 97 aa7.62□□□□□ -1.19
DDX55-203ENST00000421670 KRTAP10-6P60371 365 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms