RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 A0A1B0GVX0 72 aa9.34□□□□□ -0.91
VARS2-202ENST00000421263 KRTAP9-7A8MTY7 169 aa9.34□□□□□ -0.91
VARS2-202ENST00000421263 LCE2BO14633 110 aa9.34□□□□□ -0.91
VARS2-202ENST00000421263 KRTAP9-3Q9BYQ3 159 aa9.34□□□□□ -0.91
VARS2-202ENST00000421263 FCGBPQ9Y6R7 5405 aaPredicted RBP9.32□□□□□ -0.92
VARS2-202ENST00000421263 RBM3P98179 157 aaKnown RBP9.32□□□□□ -0.92
VARS2-202ENST00000421263 SCGB1C2P0DMR2 95 aa9.29□□□□□ -0.92
VARS2-202ENST00000421263 DSCR8Q96T75 97 aa9.29□□□□□ -0.92
VARS2-202ENST00000421263 VPS25Q9BRG1 176 aa9.29□□□□□ -0.92
VARS2-202ENST00000421263 KRTAP10-10P60014 251 aa9.28□□□□□ -0.92
VARS2-202ENST00000421263 ZCCHC13Q8WW36 166 aaKnown RBP9.28□□□□□ -0.92
VARS2-202ENST00000421263 J3KT08 172 aa9.27□□□□□ -0.93
VARS2-202ENST00000421263 C21orf62-AS1Q17RA5 79 aa9.26□□□□□ -0.93
VARS2-202ENST00000421263 TMA7Q9Y2S6 64 aaKnown RBP9.26□□□□□ -0.93
VARS2-202ENST00000421263 MTURNQ8N3F0 131 aa9.25□□□□□ -0.93
VARS2-202ENST00000421263 SPINK7P58062 85 aa9.24□□□□□ -0.93
VARS2-202ENST00000421263 Q6ZQT0 140 aa9.24□□□□□ -0.93
VARS2-202ENST00000421263 KRTAP19-1Q8IUB9 90 aa9.24□□□□□ -0.93
VARS2-202ENST00000421263 Q8N9P0 234 aaPredicted RBP9.24□□□□□ -0.93
VARS2-202ENST00000421263 C9JAW5 83 aa9.23□□□□□ -0.93
VARS2-202ENST00000421263 BAALC-AS2P0C853 105 aa9.23□□□□□ -0.93
VARS2-202ENST00000421263 NDUFB1O75438 58 aa9.17□□□□□ -0.94
VARS2-202ENST00000421263 A0A1B0GW54 56 aa9.15□□□□□ -0.94
VARS2-202ENST00000421263 C8orf17Q9NRJ1 99 aa9.14□□□□□ -0.95
VARS2-202ENST00000421263 A8MWP4 228 aa9.13□□□□□ -0.95
VARS2-202ENST00000421263 M0R143 59 aa9.13□□□□□ -0.95
VARS2-202ENST00000421263 JMJD7-PLA2G4BH0Y9G9 81 aa9.12□□□□□ -0.95
VARS2-202ENST00000421263 ATXN8Q156A1 80 aa9.12□□□□□ -0.95
VARS2-202ENST00000421263 LOC110117498A0A087WWA1 95 aa9.11□□□□□ -0.95
VARS2-202ENST00000421263 IGKV3D-7A0A0C4DH55 119 aa9.11□□□□□ -0.95
VARS2-202ENST00000421263 WFDC13Q8IUB5 93 aa9.08□□□□□ -0.96
VARS2-202ENST00000421263 MACF1Q9UPN3 7388 aaKnown RBP9.08□□□□□ -0.96
VARS2-202ENST00000421263 PDE6GP18545 87 aa9.07□□□□□ -0.96
VARS2-202ENST00000421263 NAA38Q9BRA0 125 aaKnown RBP9.07□□□□□ -0.96
VARS2-202ENST00000421263 Q6ZVQ6 151 aa9.06□□□□□ -0.96
VARS2-202ENST00000421263 KRTAP19-6Q3LI70 58 aa9.04□□□□□ -0.96
VARS2-202ENST00000421263 LYRM7Q5U5X0 104 aa9.04□□□□□ -0.96
VARS2-202ENST00000421263 PRR15Q8IV56 129 aa9.04□□□□□ -0.96
VARS2-202ENST00000421263 C14orf132Q9NPU4 83 aa9.01□□□□□ -0.97
VARS2-202ENST00000421263 SMIM6P0DI80 62 aa9□□□□□ -0.97
VARS2-202ENST00000421263 LINC00846Q9NV44 126 aa9□□□□□ -0.97
VARS2-202ENST00000421263 NREPQ16612 68 aa8.99□□□□□ -0.97
VARS2-202ENST00000421263 MMP24-AS1A0A0U1RRL7 71 aa8.98□□□□□ -0.97
VARS2-202ENST00000421263 TMEM254Q8TBM7 123 aa8.98□□□□□ -0.97
VARS2-202ENST00000421263 MRPL34Q9BQ48 92 aaKnown RBP8.98□□□□□ -0.97
VARS2-202ENST00000421263 SYNE2Q8WXH0 6885 aaKnown RBP8.97□□□□□ -0.97
VARS2-202ENST00000421263 H1FX-AS1Q4G0G2 97 aa8.94□□□□□ -0.98
VARS2-202ENST00000421263 hDV103S1A0JD37 113 aa8.91□□□□□ -0.98
VARS2-202ENST00000421263 TSTD3H0UI37 97 aa8.91□□□□□ -0.98
VARS2-202ENST00000421263 K7EQZ3 153 aa8.89□□□□□ -0.99
VARS2-202ENST00000421263 BATFQ16520 125 aa8.88□□□□□ -0.99
VARS2-202ENST00000421263 H3BT86 120 aa8.86□□□□□ -0.99
VARS2-202ENST00000421263 C9orf118A6NHY6 69 aa8.85□□□□□ -0.99
VARS2-202ENST00000421263 NDUFS5O43920 106 aa8.84□□□□□ -0.99
VARS2-202ENST00000421263 Q5W150 140 aa8.84□□□□□ -0.99
VARS2-202ENST00000421263 A0A1W2PPM0 123 aa8.8□□□□□ -1
VARS2-202ENST00000421263 TAX1BP3O14907 124 aa8.8□□□□□ -1
VARS2-202ENST00000421263 C7orf65Q6ZTY9 151 aa8.8□□□□□ -1
VARS2-202ENST00000421263 IGKV2D-30A0A075B6S6 120 aa8.79□□□□□ -1
VARS2-202ENST00000421263 BPY2O14599 106 aa8.79□□□□□ -1
VARS2-202ENST00000421263 IGKV2-30P06310 120 aa8.79□□□□□ -1
VARS2-202ENST00000421263 KRTAP6-3Q3LI67 103 aa8.74□□□□□ -1.01
VARS2-202ENST00000421263 LOC105371267A0A1B0GV96 52 aa8.71□□□□□ -1.02
VARS2-202ENST00000421263 CASC2Q6XLA1 102 aa8.71□□□□□ -1.02
VARS2-202ENST00000421263 C4orf26Q17RF5 130 aa8.7□□□□□ -1.02
VARS2-202ENST00000421263 Q8N9L7 120 aa8.7□□□□□ -1.02
VARS2-202ENST00000421263 HCG22E2RYF7 251 aa8.69□□□□□ -1.02
VARS2-202ENST00000421263 CXCL6P80162 114 aa8.66□□□□□ -1.02
VARS2-202ENST00000421263 SPCS1Q9Y6A9 102 aa8.66□□□□□ -1.02
VARS2-202ENST00000421263 SMCPP49901 116 aaPredicted RBP8.63□□□□□ -1.03
VARS2-202ENST00000421263 KRTAP3-1Q9BYR8 98 aa8.63□□□□□ -1.03
VARS2-202ENST00000421263 C5orf47Q569G3 176 aa8.6□□□□□ -1.03
VARS2-202ENST00000421263 UBL5Q9BZL1 73 aa8.56□□□□□ -1.04
VARS2-202ENST00000421263 MT1BP07438 61 aa8.55□□□□□ -1.04
VARS2-202ENST00000421263 PRO0461Q9UI25 63 aa8.55□□□□□ -1.04
VARS2-202ENST00000421263 COL5A1-AS1Q5SY13 56 aa8.54□□□□□ -1.04
VARS2-202ENST00000421263 SPRR2GQ9BYE4 73 aa8.53□□□□□ -1.04
VARS2-202ENST00000421263 S4R3F8 94 aa8.53□□□□□ -1.04
VARS2-202ENST00000421263 FAM236AA0A1B0GUQ0 79 aa8.52□□□□□ -1.05
VARS2-202ENST00000421263 FAM236BA0A1B0GV22 79 aa8.52□□□□□ -1.05
VARS2-202ENST00000421263 KRTAP19-8Q3LI54 63 aa8.52□□□□□ -1.05
VARS2-202ENST00000421263 CSAG1Q6PB30 78 aa8.52□□□□□ -1.05
VARS2-202ENST00000421263 C1orf64Q8NEQ6 169 aa8.52□□□□□ -1.05
VARS2-202ENST00000421263 K7EP34 96 aa8.5□□□□□ -1.05
VARS2-202ENST00000421263 LCA10Q71F78 164 aa8.5□□□□□ -1.05
VARS2-202ENST00000421263 A6NN06 94 aa8.49□□□□□ -1.05
VARS2-202ENST00000421263 Q5VV11 94 aa8.49□□□□□ -1.05
VARS2-202ENST00000421263 NEBP20929 6669 aa8.45□□□□□ -1.06
VARS2-202ENST00000421263 MUC12Q9UKN1 5478 aa8.45□□□□□ -1.06
VARS2-202ENST00000421263 TP53AIP1Q9HCN2 124 aa8.44□□□□□ -1.06
VARS2-202ENST00000421263 KRTAP3-3Q9BYR6 98 aa8.41□□□□□ -1.06
VARS2-202ENST00000421263 KRTAP10-5P60370 271 aa8.4□□□□□ -1.06
VARS2-202ENST00000421263 KLKP1Q107X0 134 aa8.4□□□□□ -1.06
VARS2-202ENST00000421263 GTF2H5Q6ZYL4 71 aa8.39□□□□□ -1.07
VARS2-202ENST00000421263 F8W1H4 67 aa8.37□□□□□ -1.07
VARS2-202ENST00000421263 ETDBQ3ZM63 59 aa8.33□□□□□ -1.08
VARS2-202ENST00000421263 CYP4F30PQ9H0H9 118 aa8.33□□□□□ -1.08
VARS2-202ENST00000421263 CRIPTQ9P021 101 aa8.28□□□□□ -1.08
VARS2-202ENST00000421263 A0A087WVE0 104 aa8.27□□□□□ -1.09
VARS2-202ENST00000421263 KRTAP5-9P26371 169 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms