RNA–Protein interactions for RNA: ENST00000420692.6

CTSB-203, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 2,230 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-203ENST00000420692 PRR4Q16378 134 aa9.48□□□□□ -0.89
CTSB-203ENST00000420692 C1orf64Q8NEQ6 169 aa9.48□□□□□ -0.89
CTSB-203ENST00000420692 PKHD1P08F94 4074 aa9.46□□□□□ -0.89
CTSB-203ENST00000420692 H3BPC8 53 aa9.46□□□□□ -0.89
CTSB-203ENST00000420692 CYP4F30PQ9H0H9 118 aa9.46□□□□□ -0.89
CTSB-203ENST00000420692 KRTAP13-2Q52LG2 175 aa9.43□□□□□ -0.9
CTSB-203ENST00000420692 SSBP3-AS1Q7Z2R9 100 aa9.43□□□□□ -0.9
CTSB-203ENST00000420692 CD164Q04900 197 aa9.42□□□□□ -0.9
CTSB-203ENST00000420692 SPINK6Q6UWN8 80 aa9.41□□□□□ -0.9
CTSB-203ENST00000420692 CDK2AP2O75956 126 aa9.41□□□□□ -0.9
CTSB-203ENST00000420692 TP53AIP1Q9HCN2 124 aa9.4□□□□□ -0.91
CTSB-203ENST00000420692 MRPL34Q9BQ48 92 aaKnown RBP9.39□□□□□ -0.91
CTSB-203ENST00000420692 SPANXA2-OT1Q8N9U9 137 aa9.38□□□□□ -0.91
CTSB-203ENST00000420692 MPLKIPQ8TAP9 179 aa9.38□□□□□ -0.91
CTSB-203ENST00000420692 KRTAP1-4P0C5Y4 121 aa9.37□□□□□ -0.91
CTSB-203ENST00000420692 DYNC1H1Q14204 4646 aaKnown RBP9.37□□□□□ -0.91
CTSB-203ENST00000420692 NDUFS5O43920 106 aa9.36□□□□□ -0.91
CTSB-203ENST00000420692 Q5W150 140 aa9.31□□□□□ -0.92
CTSB-203ENST00000420692 LINC00336Q6ZUF6 198 aa9.31□□□□□ -0.92
CTSB-203ENST00000420692 PCOTHQ58A44 107 aa9.31□□□□□ -0.92
CTSB-203ENST00000420692 KRTAP13-3Q3SY46 172 aa9.3□□□□□ -0.92
CTSB-203ENST00000420692 C1orf195Q5TG92 126 aa9.3□□□□□ -0.92
CTSB-203ENST00000420692 IGLV7-46A0A075B6I9 117 aa9.29□□□□□ -0.92
CTSB-203ENST00000420692 Q1T7F1 81 aa9.27□□□□□ -0.93
CTSB-203ENST00000420692 FAT1Q14517 4588 aa9.25□□□□□ -0.93
CTSB-203ENST00000420692 APOBP04114 4563 aaKnown RBP9.24□□□□□ -0.93
CTSB-203ENST00000420692 C8orf87E5RJ46 101 aa9.24□□□□□ -0.93
CTSB-203ENST00000420692 Q8N9P0 234 aaPredicted RBP9.23□□□□□ -0.93
CTSB-203ENST00000420692 PLA2G1BP04054 148 aaKnown RBP9.21□□□□□ -0.93
CTSB-203ENST00000420692 LINC00313P59037 77 aa9.21□□□□□ -0.94
CTSB-203ENST00000420692 COA5Q86WW8 74 aa9.19□□□□□ -0.94
CTSB-203ENST00000420692 KRTAP16-1A8MUX0 517 aa9.18□□□□□ -0.94
CTSB-203ENST00000420692 RYR2Q92736 4967 aa9.17□□□□□ -0.94
CTSB-203ENST00000420692 LOC101927531A0A1B0GV80 90 aa9.16□□□□□ -0.94
CTSB-203ENST00000420692 TYMSOSQ8TAI1 123 aa9.15□□□□□ -0.94
CTSB-203ENST00000420692 A0A1B0GVY2 172 aa9.15□□□□□ -0.95
CTSB-203ENST00000420692 PSPHP1O15172 72 aa9.15□□□□□ -0.95
CTSB-203ENST00000420692 PKHD1L1Q86WI1 4243 aa9.14□□□□□ -0.95
CTSB-203ENST00000420692 SMR3BP02814 79 aaPredicted RBP9.13□□□□□ -0.95
CTSB-203ENST00000420692 LIMD2Q9BT23 127 aa9.13□□□□□ -0.95
CTSB-203ENST00000420692 KMT2CQ8NEZ4 4911 aaKnown RBP9.13□□□□□ -0.95
CTSB-203ENST00000420692 PRR26Q8N8Z3 221 aa9.12□□□□□ -0.95
CTSB-203ENST00000420692 RETNLBQ9BQ08 111 aa9.12□□□□□ -0.95
CTSB-203ENST00000420692 PRO0628Q9UI54 55 aa9.12□□□□□ -0.95
CTSB-203ENST00000420692 HRES1P13985 223 aa9.11□□□□□ -0.95
CTSB-203ENST00000420692 A8MUN3 132 aa9.1□□□□□ -0.95
CTSB-203ENST00000420692 BRK1Q8WUW1 75 aa9.1□□□□□ -0.95
CTSB-203ENST00000420692 SPINK1P00995 79 aa9.09□□□□□ -0.95
CTSB-203ENST00000420692 KRTAP10-4P60372 401 aaPredicted RBP9.09□□□□□ -0.95
CTSB-203ENST00000420692 C4orf48Q5BLP8 95 aa9.09□□□□□ -0.95
CTSB-203ENST00000420692 FAM229AH3BQW9 127 aa9.08□□□□□ -0.96
CTSB-203ENST00000420692 Q5VV11 94 aa9.06□□□□□ -0.96
CTSB-203ENST00000420692 V9GYY9 64 aa9.06□□□□□ -0.96
CTSB-203ENST00000420692 IGKV2-30P06310 120 aa9.03□□□□□ -0.96
CTSB-203ENST00000420692 LINC00304Q8N9R0 145 aa9.03□□□□□ -0.96
CTSB-203ENST00000420692 RPS29P62273 56 aaKnown RBP8.99□□□□□ -0.97
CTSB-203ENST00000420692 PRR15LQ9BU68 103 aa8.99□□□□□ -0.97
CTSB-203ENST00000420692 SPAG11AQ6PDA7 123 aa8.97□□□□□ -0.97
CTSB-203ENST00000420692 DMAC1Q96GE9 116 aa8.96□□□□□ -0.98
CTSB-203ENST00000420692 A8MU10 97 aa8.94□□□□□ -0.98
CTSB-203ENST00000420692 LINC01558Q9Y6Z2 57 aa8.94□□□□□ -0.98
CTSB-203ENST00000420692 ACYP2P14621 99 aa8.92□□□□□ -0.98
CTSB-203ENST00000420692 IGKV2D-30A0A075B6S6 120 aa8.92□□□□□ -0.98
CTSB-203ENST00000420692 CHKB-CPT1BH3BT56 60 aa8.9□□□□□ -0.98
CTSB-203ENST00000420692 Q75L30 129 aa8.9□□□□□ -0.98
CTSB-203ENST00000420692 LRP1Q07954 4544 aaKnown RBP8.9□□□□□ -0.98
CTSB-203ENST00000420692 HSPG2P98160 4391 aa8.88□□□□□ -0.99
CTSB-203ENST00000420692 TNXBP22105 4242 aa8.87□□□□□ -0.99
CTSB-203ENST00000420692 RYR3Q15413 4870 aa8.86□□□□□ -0.99
CTSB-203ENST00000420692 FAT3Q8TDW7 4589 aa8.86□□□□□ -0.99
CTSB-203ENST00000420692 FLG2Q5D862 2391 aaPredicted RBP8.84□□□□□ -1
CTSB-203ENST00000420692 C9orf92A6NGG3 77 aa8.83□□□□□ -1
CTSB-203ENST00000420692 LCA10Q71F78 164 aa8.82□□□□□ -1
CTSB-203ENST00000420692 A8MUU9 505 aa8.79□□□□□ -1
CTSB-203ENST00000420692 C20orf166-AS1Q96NR2 134 aa8.78□□□□□ -1
CTSB-203ENST00000420692 A6NED7 52 aa8.78□□□□□ -1
CTSB-203ENST00000420692 SPINK7P58062 85 aa8.77□□□□□ -1.01
CTSB-203ENST00000420692 C7orf65Q6ZTY9 151 aa8.76□□□□□ -1.01
CTSB-203ENST00000420692 RYR1P21817 5038 aa8.76□□□□□ -1.01
CTSB-203ENST00000420692 Q8N1X5 172 aa8.74□□□□□ -1.01
CTSB-203ENST00000420692 KRTAP17-1Q9BYP8 105 aa8.73□□□□□ -1.01
CTSB-203ENST00000420692 KRTAP10-8P60410 259 aa8.69□□□□□ -1.02
CTSB-203ENST00000420692 CDC42SE1Q9NRR8 79 aa8.69□□□□□ -1.02
CTSB-203ENST00000420692 Q5VSD8 79 aa8.66□□□□□ -1.02
CTSB-203ENST00000420692 MYCBP2O75592 4640 aa8.65□□□□□ -1.02
CTSB-203ENST00000420692 KRTAP3-1Q9BYR8 98 aa8.64□□□□□ -1.03
CTSB-203ENST00000420692 KIAA1109Q2LD37 5005 aa8.64□□□□□ -1.03
CTSB-203ENST00000420692 DMBT1Q9UGM3 2413 aaPredicted RBP8.62□□□□□ -1.03
CTSB-203ENST00000420692 ATP11AUNQ6ZP68 121 aa8.62□□□□□ -1.03
CTSB-203ENST00000420692 SPTSSBQ8NFR3 76 aa8.62□□□□□ -1.03
CTSB-203ENST00000420692 A0A1B0GU69 56 aa8.61□□□□□ -1.03
CTSB-203ENST00000420692 PMAIP1Q13794 54 aa8.6□□□□□ -1.03
CTSB-203ENST00000420692 A6NN06 94 aa8.53□□□□□ -1.04
CTSB-203ENST00000420692 EPPK1P58107 5090 aaKnown RBP8.52□□□□□ -1.05
CTSB-203ENST00000420692 MT1HL1P0DM35 61 aa8.48□□□□□ -1.05
CTSB-203ENST00000420692 SPATA8Q6RVD6 105 aa8.48□□□□□ -1.05
CTSB-203ENST00000420692 XP32Q5T750 250 aa8.44□□□□□ -1.06
CTSB-203ENST00000420692 COX6B2Q6YFQ2 88 aa8.44□□□□□ -1.06
CTSB-203ENST00000420692 UQCR11O14957 56 aa8.43□□□□□ -1.06
CTSB-203ENST00000420692 RPL37P61927 97 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms